XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTCATG
CCTTCTGATCTTTATGTGGAGGCCCATGCACCAGAGTTCCCTACAGCTCC
CTTACAGAGTGGCAGGCTATTGTCAGACAGTGATCTGTCTCCACTGATGC
CAATTTATTTTGTTAGCTTCTCCCTTAGATCTCAGTGGCCTGACATGCAC
AGTTATGTTGTACCCTTCACTCTTCAAGTGATTCTATTTCTAGGGAGAGC
TTTTCCACTAAGAGTTCAGTGACCTGGTAATAACATTCTTGTTAGAAATG
TATTGGTTTCAGTGGATCAGAATGAATATATATATATATATATATATATA
TATATATATCCTTGATATTACCCAGAAGACAAGCCATAGTAAAGTTTGAG
TTATGGGAGTCATAATGTCCCATGATAGCTCATAAAGTTTCTCAACAATA
GATATTACTCGACTGACATATCTGAAAATTCTCTATGGGCCAGTGAAATC
AGCTTCTTTCAAATACTATATATTGAATGATCACTGTGCTCCCATAAAGT
CTGGATTTCTCCAGAGTCTGTCATGATGGATAAACTTTGGAACAGAAATG
AACAAACTATAGCAGATAGAACATTTGGTGCCAAATAAGCATCCTTATGT
AGATCCTTATTAATATTTGTAAATTTAATGTCATAAAGATGAAAAACCCA
AAGAGCAGATGTCCAAAAGTAAGCCAATACATTCACACTTTNAATATATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXAGGGCTTTGAGTTGGCCCACTATCTGCACTATATATG
AACTACCGGAGCACATGAAGGTGCCAGTCATTCAGAACCAAAGGTGTAAG
ATCTCTAAGACACAGGGCAACAACAGTACATCTGAGAGGAGTCCCAGTGA
GCATCCAATATTGATGGTGTAGTGGAAGCTAGAGGCTCAAACAGACCAAT
AACTCACTGCAATGAACATTTGCAAGAAAAAGCTGTTTGGGCAAAAGAGT
AGAGTGTGTAACACACCATGCATGATACTTCCACAGTGAGATTTTCTTTT
CTTGTTTGTTTGTTTGCTTGATTGATTGATTTTGAGGGGTCAGAGATTGC
AATGGTGGAGACATTGCAGATGTTAAGGGACAGAGAGATGAGTGGGTTCG
GGGGCCATGATGTAAAATTTACAAAGAATCAATAAGAGTTTTTAAAAATT
TCTAGACTAGCAAATTGAAAGAGATGAAACACACACATACACACACATAC
ACACGTGCGCACGCACACGCACATGCACACGCACATGCACACATGCAAAA
ATACATGACCATCACCACCACCACTATCACCATCACCACAAATAACAACA
TCAAATTAACAAGAATCAACAAATGTCACTTATTGTATCTCTCAACATCA
ATGGTCTCATTCCTCAATAAGACACAGACTAACAGAATGAAAGTGAAAAT
AAAN

Query= MSMg01no545_p04.b1 MSMg01no545_p04.b1 CHROMAT_FILE:
MSMg01no545_p04.b1 PHD_FILE: MSMg01no545_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:04 2005
         (648 letters)



>mm_chr14_124110630_124111677
          Length = 1048

 Score = 1114 bits (576), Expect = 0.0
 Identities = 619/646 (95%), Gaps = 21/646 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctcatgccttctgatctttatgtggaggcccatgcaccagagttccctacag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctcatgccttctgatctttatgtggaggcccatgcaccagagttccctacag 263

                                                                       
Query: 64  ctcccttacagagtggcaggctattgtcagacagtgatctgtctccactgatgccaattt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcccttacagagtggcaggctattgtcagacagtgatctgtctccactgatgccaattt 323

                                                                       
Query: 124 attttgttagcttctcccttagatctcagtggcctgacatgcacagttatgttgtaccct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attttgttagcttctcccttagatctcagtggcctgacatgcacagttatgttgtaccct 383

                                                                       
Query: 184 tcactcttcaagtgattctatttctagggagagcttttccactaagagttcagtgacctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcactcttcaagtgattctatttctagggagagcttttccactaagagttcagtgacctg 443

                                                                       
Query: 244 gtaataacattcttgttagaaatgtattggtttcagtggatcagaatgaatatatatata 303
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtaataacattctcgttagaaatgtattggtttcagtggatcagaatgaatatatatata 503

                                                                       
Query: 304 tatatatatatatatatatatatccttgatattacccagaagacaagccatagtaaagtt 363
           |||                    |||||||||||||||||||||||||||||||||||||
Sbjct: 504 tat--------------------ccttgatattacccagaagacaagccatagtaaagtt 543

                                                                       
Query: 364 tgagttatgggagtcataatgtcccatgatagctcataaagtttctcaacaatagatatt 423
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgagttatggaaatcataatgtcccatgatagctcataaagtttctcaacaatagatatt 603

                                                                       
Query: 424 actcgactgacatatctgaaaattctctatgggccagtgaaatcagcttctttcaaatac 483
           |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 604 actcaactgacatatctgaaaattctctatgggccaatgaaatcagcttctttcaaatac 663

                                                                       
Query: 484 tatatattgaatgatcactgtgctcccataaagtctggatttctccagagtctgtcatga 543
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 664 tatatattgaatgatcactgtgttcccataaagtctggatttctccagagtctgtcatga 723

                                                                       
Query: 544 tggataaacttt-ggaacagaaatgaacaaactatagcagatagaacatttggtgccaaa 602
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tggataaacttttggaacagaaatgaacaaactatagcagatagaacatttggtgccaaa 783

                                                         
Query: 603 taagcatccttatgtagatccttattaatatttgtaaatttaatgt 648
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 taagcatccttatgtagatccttattaatatttgtaaatttaatgt 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)