Query= MSMg01no547_e02.b1 MSMg01no547_e02.b1 CHROMAT_FILE:
MSMg01no547_e02.b1 PHD_FILE: MSMg01no547_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:50 2005
(705 letters)
>mm_chr14_110193099_110194203
Length = 1105
Score = 1286 bits (665), Expect = 0.0
Identities = 692/701 (98%)
Strand = Plus / Plus
Query: 5 ggaattctatatgtggtttcataaagaattttagcttttctatatattgaaacaggaata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctatatgtggtttcataaagaattttagcttttctatatattgaaacaggaata 264
Query: 65 gtttttactacctcctactagtctttcctttttctaaatgtgtccatgtggctgttttgt 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 gtttttactacctcctactagtctttcctctttctaaatgtgtccatgtggctgttttgt 324
Query: 125 ttctttttttaggaggatactaatgtttatagactgacttaagtgtcacatattttacac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctttttttaggaggatactaatgtttatagactgacttaagtgtcacatattttacac 384
Query: 185 tcaacattcagtggctaaaatgaaaaggtgttgccttggtttaaacagattctaccattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaacattcagtggctaaaatgaaaaggtgttgccttggtttaaacagattctaccattg 444
Query: 245 attgtcaccctgattgtaagtgttaaccacctaaaagctatttaacagacaaccttgcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attgtcaccctgattgtaagtgttaaccacctaaaagctatttaacagacaaccttgcat 504
Query: 305 tctttcattgttgtatacatatcagatttgtggttacaaataggccttaggggtggaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctttcattgttgtatacatatcagatttgtggttacaaataggccttaggggtggaatt 564
Query: 365 ttcaccacctacttttaattattcagcatagtgcataggcctatatgttttgtatgtcct 424
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 565 ttcaccacctacttttaattattcagcatagtgcataggcctgtatgttttttatgtcct 624
Query: 425 ctaagttggttggaagacagtgttccttgctgggtacagtctgaagttggagcctttgat 484
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 625 ctaagttggttggaagacagtgttccttgctgggtacagtctgaatttggggcctttgat 684
Query: 485 taataagcacatatacttggattttaaataccttacagatattacatattggagcttctt 544
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 685 taataagcacatatacttggtttttaaataccttacagatattacatattggagattctt 744
Query: 545 gaagtgaacgaaggaaacaggaatagatttattatactgatgctcctgtacatcaatagc 604
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 745 gaagtgaacgaaggaaacaggaatagatttattataccgatgctcctgtacatcaatagc 804
Query: 605 tacattgtaaagaattggggactttgcatgtgctagggataaacaggctgaggagctgtc 664
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 805 tacattgtaaagaattggggactttgcatgttctagggataaacaggctgaggagctgtc 864
Query: 665 acaaaccctctttgtctccttccccaacctcacaccatatt 705
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 acaaaccctctttgtctccttccccaacctcacaccatatt 905
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space: 761025
Effective search space used: 761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no547_e02.g1 MSMg01no547_e02.g1 CHROMAT_FILE:
MSMg01no547_e02.g1 PHD_FILE: MSMg01no547_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:50 2005
(673 letters)
>mm_chr14_110356649_110357722
Length = 1074
Score = 1218 bits (630), Expect = 0.0
Identities = 651/658 (98%), Gaps = 1/658 (0%)
Strand = Plus / Minus
Query: 1 actacagaacataaaatgcttccttaatttttccaaaactacttcctccttctgttaatt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 658 actacagaacataaaatgcttccttaatttttccaaaattacttcctccttctgttaatt 599
Query: 61 caaaatatgtaaaactgcattatttca-tttttctcaatattagttttatgtagacctag 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 598 caaaatatgtaaaactgcattatttcattttttctcaatattagttttatgtagacctag 539
Query: 120 gctaagtccacagtgattatgttttatgtagtgatttctccaccaaaatcatattcttgg 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gcaaagtccacagtgattatgttttatgtagtgatttctccaccaaaatcatattcttgg 479
Query: 180 attggttatgctgtggattcctttagcagtgtccatatcttttgtttgtcttatttggta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attggttatgctgtggattcctttagcagtgtccatatcttttgtttgtcttatttggta 419
Query: 240 gattactctgtgtaaaacatctgcttgtgaaaatcacatagatacatctggcatcatgtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gattactctgtgtaaaacatctgcttgtgaaaatcacatagatacatctggcatcatgtt 359
Query: 300 gacccacgatattgtgataatggtttcacttgcagctcttacagatatacttgaatctgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gacccacgatattgtgataatggtttcacttgcagctcttacagatatacttgaatctgt 299
Query: 360 tcatgagtcatactgacatggcctttctaaagacacttgcttttcaatagacacaacaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tcatgagtcatactgacatggcctttctaaagacacttgcttttcaatagacacaacaca 239
Query: 420 ttagtggttgttaacttctaggttgtagaccatttcacaaactttctatctccaaaaata 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 238 ttagtggttgttaacttctaggttgtagaccttttcacaaactttctatctccaaaaata 179
Query: 480 ctaggattgcaattcatagcagtaggaaattttcagttatggaggagcaaagagaataat 539
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 178 ctaggattgcaattcatagcagtaggaaattttcagttatgaaggagcaaagagaataat 119
Query: 540 tttaaaattgtgggtcaccagaacatgaggaattaaactaaagggtcacatctgtaggaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tttaaaattgtgggtcaccagaacatgaggaattaaactaaagggtcacatctgtaggaa 59
Query: 600 gggtgagaaccattatcgtacatgaatattcattctgatcctggctaaatacaacatg 657
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 58 gggtgagaaccattatcatacatgaatattcattctgatcctggctaaatgcaacatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
