Query= MSMg01no547_g11.b1 MSMg01no547_g11.b1 CHROMAT_FILE:
MSMg01no547_g11.b1 PHD_FILE: MSMg01no547_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:02 2005
(605 letters)
>mm_chr14_37523926_37524924
Length = 999
Score = 1021 bits (528), Expect = 0.0
Identities = 578/598 (96%), Gaps = 10/598 (1%)
Strand = Plus / Minus
Query: 4 ggaattctaagtcttcataattgacacttgccatgtgtcttgtaagaaggtgcttctggg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ggaattctaagtcttcataattgacacttgccatgtgtcttgtaagaaggtgcttctggg 707
Query: 64 attgaacacttgtgaccctggtgtcaaaagtagacaggactggaaccatagaccttgacg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 706 attgaacacttgtgaccctggtgtcaaaagtagacaggactggaaccatagaccttgaag 647
Query: 124 ctagcatacggactccatagggccatttgttatgaatgtgagagagcaatcttccagtaa 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 646 ctagcatacggactccatagggccatttgttatgaatgtgagagaacaatcttccagtaa 587
Query: 184 tgagtgagagtaatgatttttcctcaaatattttgattttagcaaaaaggaggctgatta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ----tgagagtaatgatttttcctcaaatattttgattttagcaaaaaggaggctgatta 531
Query: 244 atagaatacagagcagaagctaggcttttactttaaccagaaaatgtgctaggagatcag 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 530 atagaatacagagcagaagctaggcttttacttgaaccagaaaatgtgctaggagatcag 471
Query: 304 cctgaagggggcctttggttcatcctctggtgtctccatccttaagatttatgaaaggtc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cctgaagggggcctttggttcatcctctggtgtctccatccttaagatttatgaaaggtc 411
Query: 364 tttctgccgaaaacactgaacaaagtaatggggagatcagagagatgagagaatggagca 423
|||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 410 tttctggcgaaa-cactgaacaaagtaatggggagatcagagagacgagagaatggagca 352
Query: 424 gagcgacagagttatagaatgggtaattgtgggccattggcc-gattggtcacatta-tg 481
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 351 gagcgacagagttatagaatgggtaattgtgggccattggccagattggtcacatttctc 292
Query: 482 aagattgggtctcattatgtccaatgtctggcttccaggtttaaaacaaaacagaattga 541
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 a---ttgggtctcattatgtccaatgtctggcttccaggtttaaaacaaaacagaattga 235
Query: 542 agtgggaggtgatattaagattcatgaaataaggaagagaaagaagaaggagaaggag 599
||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 234 agtaggaagtgatattaagattcatgaaataaggaggagaaagaagaaggagaaggag 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 999
Length adjustment: 10
Effective length of query: 595
Effective length of database: 989
Effective search space: 588455
Effective search space used: 588455
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_g11.g1 MSMg01no547_g11.g1 CHROMAT_FILE:
MSMg01no547_g11.g1 PHD_FILE: MSMg01no547_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:02 2005
(699 letters)
>mm_chr14_37359477_37360575
Length = 1099
Score = 1330 bits (688), Expect = 0.0
Identities = 696/699 (99%)
Strand = Plus / Plus
Query: 1 attcttctataatcggagacaaggaaaaactttcccaataaagcatatattctaatttgc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttctgtaatcggagacaaggaaaaactttcccaataaagcatatattctaatttgc 260
Query: 61 taaagaaagaggttcatgtatctgaccctattaaaatgaaagaaaattactagagagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagaaagaggttcatgtatctgaccctattaaaatgaaagaaaattactagagagcaa 320
Query: 121 attaaaaacaatggattccaaaagctaaatgataagaaactttgcaactaataccaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaaaaacaatggattccaaaagctaaatgataagaaactttgcaactaataccaaaga 380
Query: 181 gtaactgtccttaatgtatacaaacttcttaaaatagggaataaaacttcttagtaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaactgtccttaatgtatacaaacttcttaaaatagggaataaaacttcttagtaaaat 440
Query: 241 taaagacacaaccaaccaattaagaggaaatgtatactccttaaattaggaaataatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagacacaaccaaccaattaagaggaaatgtatactccttaaattaggaaataatcag 500
Query: 301 ccccactcatattgagacatgaagataaaagtacatatataacatttctaaatctgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccactcatattgagacatgaagataaaagtacatatataacatttctaaatctgataa 560
Query: 361 agtttcaaagttcatggttaagatacctatatggaaatagatttttttacaaattgctat 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 agtttcaaagttcatggttaagatacctatatggaaataggtttttttacaaattgctat 620
Query: 421 aggaatgccatattggtgggggacctaaagtgtatcccataaagtaattgaaaagttctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggaatgccatattggtgggggacctaaagtgtatcccataaagtaattgaaaagttctg 680
Query: 481 gtcacttttatccttttgattgtcaacacatcagtaaacacactggtaaaaatgcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcacttttatccttttgattgtcaacacatcagtaaacacactggtaaaaatgcaagac 740
Query: 541 aattccttttattatctacttatgtatttgaccaagataaaagaagaaatcacccaaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aattccttttattatctacttatgtatttgaccaagataaaagaagaaatcacccaaata 800
Query: 601 tataagagaagaagatggatgaataagcttctatagatccatagaacagggtgggcctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tataagagaagaagatggatgaataagcttctatagatccatagaacagggtgggcctat 860
Query: 661 ggttattttaactttaaagnaatattttctatctttgtt 699
||||||||||||||||||| |||||||||||||||||||
Sbjct: 861 ggttattttaactttaaagtaatattttctatctttgtt 899
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
