BAC Information

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BAC

Clone NameB6Ng01-001F18
Chromosome15 (Build37)
Map Location 89,366,098 - 89,367,255
singlet/doubletsinglet
Overlap geneShank3
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa
Downstream geneAcr, Rabl2a, LOC676575, Syt10, Alg10b, Cpne8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001F18.bB6Ng01-001F18.g
ACCDH839705DH839706
length3091,156
definitionDH839705|Mus musculus domesticus DNA, BAC clone: B6Ng01-001F18, 5' end.DH839706|Mus musculus domesticus DNA, BAC clone: B6Ng01-001F18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caggacagccagggcttcacaaataaaccctgtctcgaaaaaccaaaaaa
aaaaaaaaaaaaaaaaaaaaaaatggacctgtgggcatgtttctatatgc
agccatcttgttgaccagacccagtttttgaagatgctgtgggttttggt
gttggtgttggtgttggtgttttgagtgtgggttttggtctttattccgg
aaatcagatgtcctttctttatttggtttttcatgttttcccctttcctt
aataaaacctatctgttttttattccctgcacgctgccctttttccccta
cccatgccc
gaattccagaggaaatgaatagaaaggctaagaatctcccaaaagcaaac
agatattatgagactcctttctgaagaagtatgtcacaaataaattatga
tctgtcagggcagaaatttaaaatgccaccaacaagcagaaagatgttta
aaaataccagcgccggtagagggagtcagcggctcagagtgagcgatgat
ggtttgactttaggcttcttcagcagtgatagagacagaagacgattaaa
gttatcctagccaaactggctgactagagagagcagagacacccacagac
ttcaggctctagggtctaatctaacccaggtcagtcttagagatcagacc
tatggcatagatggataaaccaatatggtacacagctcggtttgactgga
ccttggtgcacagtcctggagtcttgctagaagctgttctaataccaggt
cagaagggctcttcttacttcctactaagaggtgttatccatcctgaact
ctgaactccaggaccctagaggcttgctgtgggaatggaagagctctgtc
gggccgggctatggcttttgcctgtagaaatgggagcagaggagttgaat
cttttcctctgctccagaactacaactgtagttgtaactacagttacaga
tcttgctggcccagaggtatcatggtatttctgagtagaggctagaaggg
gtctgggaacagctcagctggagcctctgcctatacttctgcgcccagga
tcatagctattgaaactgaaccaaggttctaaatgggcctgtatttagag
aaaagctaccccgacacaaagacaactatcttggaggggacctggtcctt
ctgggaatgtctgattggagaaaggcagaccagcatagcatttctccaaa
tcgctggagcatcccacaatccactgtcttgttcttttttcgttcgtttg
tttgagacagggtgattccgtagtctaggcagctcttgaactgcctgtat
ttttttgaagtctagattgcaggcatgctctatcattctggatttgtttg
tggtttttgaaaggtagaataagaatattgagtcactactgttataaaca
ggcctatcctgtcagtcactggcggtcttctttaagagccatgttgtcaa
aaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89366098_89367255
seq2: B6Ng01-001F18.g_67_1222

seq1  GAATTCCAGAGGAAATGAATAGAAAGGCTAAGAATCTCCCAAAAGCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGAAATGAATAGAAAGGCTAAGAATCTCCCAAAAGCAAAC  50

seq1  AGATATTATGAGACTCCTTTCTGAAGAAGTATGTCACAAATAAATTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTATGAGACTCCTTTCTGAAGAAGTATGTCACAAATAAATTATGA  100

seq1  TCTGTCAGGGCAGAAATTTAAAATGCCACCAACAAGCAGAAAGATGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGGCAGAAATTTAAAATGCCACCAACAAGCAGAAAGATGTTTA  150

seq1  AAAATACCAGCGCCGGTAGAGGGAGTCAGCGGCTCAGAGTGAGCGATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCAGCGCCGGTAGAGGGAGTCAGCGGCTCAGAGTGAGCGATGAT  200

seq1  GGTTTGACTTTAGGCTTCTTCAGCAGTGATAGAGACAGAAGACGATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACTTTAGGCTTCTTCAGCAGTGATAGAGACAGAAGACGATTAAA  250

seq1  GTTATCCTAGCCAAACTGGCTGACTAGAGAGAGCAGAGACACCCACAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCTAGCCAAACTGGCTGACTAGAGAGAGCAGAGACACCCACAGAC  300

seq1  TTCAGGCTCTAGGGTCTAATCTAACCCAGGTCAGTCTTAGAGATCAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTCTAGGGTCTAATCTAACCCAGGTCAGTCTTAGAGATCAGACC  350

seq1  TATGGCATAGATGGATAAACCAATATGGTACACAGCTCGGTTTGACTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCATAGATGGATAAACCAATATGGTACACAGCTCGGTTTGACTGGA  400

seq1  CCTTGGTGCACAGTCCTGGAGTCTTGCTAGAAGCTGTTCTAATACCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTGCACAGTCCTGGAGTCTTGCTAGAAGCTGTTCTAATACCAGGT  450

seq1  CAGAAGGGCTCTTCTTACTTCCTACTAAGAGGTGTTATCCATCCTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGCTCTTCTTACTTCCTACTAAGAGGTGTTATCCATCCTGAACT  500

seq1  CTGAACTCCAGGACCCTAGAGGCTTGCTGTGGGAATGGAAGAGCTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCAGGACCCTAGAGGCTTGCTGTGGGAATGGAAGAGCTCTGTC  550

seq1  GGGCCGGGCTATGGCTTTTGCCTGTAGAAATGGGAGCAGAGGAGTTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGGGCTATGGCTTTTGCCTGTAGAAATGGGAGCAGAGGAGTTGAAT  600

seq1  CTTTTCCTCTGCTCCAGAACTACAACTGTAGTTGTAACTACAGTTACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTCTGCTCCAGAACTACAACTGTAGTTGTAACTACAGTTACAGA  650

seq1  TCTTGCTGGCCCAGAGGTATCATGGTATTTCTGAGTAGAGGCTAGAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGGCCCAGAGGTATCATGGTATTTCTGAGTAGAGGCTAGAAGGG  700

seq1  GTCTGGGAACAGCTCAGCTGGAGCCTCTGCCTATACTTCTGCGCCCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGAACAGCTCAGCTGGAGCCTCTGCCTATACTTCTGCGCCCAGGA  750

seq1  TCATAGCTATTGAAACTGAACCAAGGTTCTAAATGGGCCTGTATTTAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCTATTGAAACTGAACCAAGGTTCTAAATGGGCCTGTATTTAGAG  800

seq1  AAAAGCTACCCCGACACAAAGACAACTATCTTGGGAGGGGACCTGGTCCT  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAAGCTACCCCGACACAAAGACAACTATCTT-GGAGGGGACCTGGTCCT  849

seq1  TCTGGGAATGTCTGATTGGAGAAAGGCAGACCAGCATAGCA-TTCTCCAA  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTGGGAATGTCTGATTGGAGAAAGGCAGACCAGCATAGCATTTCTCCAA  899

seq1  ATCGCT-GAGCATCCCACAATCCACTGTCTTGTTC-TTTTTCGTTCGTTT  947
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  ATCGCTGGAGCATCCCACAATCCACTGTCTTGTTCTTTTTTCGTTCGTTT  949

seq1  GTTTGAGACAGGGTGATTCCGTAGTCTAGGCAGCTCTTGAACTGCCTGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGACAGGGTGATTCCGTAGTCTAGGCAGCTCTTGAACTGCCTGTA  999

seq1  TTTTTTTGAGTTCTAGGATTGCAGGCATGCTCTATCATTCCTGGATTTGT  1047
      |||||||||  |||| ||||||||||||||||||||||| ||||||||||
seq2  TTTTTTTGAAGTCTA-GATTGCAGGCATGCTCTATCATT-CTGGATTTGT  1047

seq1  TTGT-GTTTTTGAAAGGTAGAAATAAGACATATTGAGTCACTACTGTTAT  1096
      |||| ||||||||||||||| ||||||| |||||||||||||||||||||
seq2  TTGTGGTTTTTGAAAGGTAG-AATAAGA-ATATTGAGTCACTACTGTTAT  1095

seq1  AAACATGCCTATCCTGCCAGTCACTGGCAGTC-TCTTTAGGAGCCATGTT  1145
      ||||| |||||||||| ||||||||||| ||| |||||| |||||||| |
seq2  AAACAGGCCTATCCTGTCAGTCACTGGCGGTCTTCTTTAAGAGCCATG-T  1144

seq1  TGTCAAAGAGGTA  1158
      ||||||| |||||
seq2  TGTCAAA-AGGTA  1156