BAC Information

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BAC

Clone NameB6Ng01-004J16
Chromosome15 (Build37)
Map Location 45,209,665 - 45,210,802
singlet/doubletsinglet
Overlap genenone
Upstream geneNudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004J16.bB6Ng01-004J16.g
ACCDH841966DH841967
length9941,137
definitionDH841966|Mus musculus domesticus DNA, BAC clone: B6Ng01-004J16, 5' end.DH841967|Mus musculus domesticus DNA, BAC clone: B6Ng01-004J16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtccca
tatctgatttgggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgctttgcagaatctttgcaattttat
gaggtcccatttattgattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttccccctgtacccatgtcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttaaccttagtacaaggagatagaaatggatcaatttgc
attcttctacacgataagtgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgcgtcttcaattgtattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt
tattcttgagaagagtttttgctatcctaggtttttttttattccagatg
aatctgccgattacccttttctatttcgttgaagaattgaggtggaattt
tgatggagattgcattgaatctgtagattgcttttggcaagatagccatt
ttttacaatgtttgatcctgccaattccatgagcatgggagatcttttcc
atcttctgagatcttctttaatttctttcttaagagactgaatttcttat
cataatagatcttcactccttagttagagtcatggcaaggtattttatat
taattgtgactattggagaaggggtgttggttccctaatttctt
gaattccaacatagaatagctgatgagtttaggacaatagattctgtgtc
cagcagttgtgccatctggttgattttaattattaagattgttttgtgtt
ttccattcgctaagattcaggtgggcaagtgaaagggtgcagccaggtgg
ctgccattggtagagcttgaggcagaggtggatggatggtggaaccgtaa
ttatctgtagttccagttcttggacgggacacattctaggaagcttacca
aagccaaccagaggaatgggcagtgggcaggggctcggactgtagcacag
gacaaggaacagaaggagactggagcgcttggtgaagttagccatgggaa
ctgggtgagaccacatagcaggagcaatcttaggtttatttaaattttaa
caccacagttgcagaccccacactttccagacttcttcatgtcctctcca
aacctgtgtactggtggatactcagaaagaagaggcagaacccgcaacca
catactcctttctgaactcctctgccatatttttacactgctgtgtaaat
aaatatgcctatttctctagatatcagtgctatcttccaatctatacaaa
tattcttaaaaagaatagtaataaaaagaaaatagataacaaactttagt
caacaaaattttatcttcaaaagtgaaaattttatgtatattgatttgtc
acaaagatgtttaaatatgtgaacaaattaatctgtaaaaataattaagc
taaaatgagtcaaaaaattaaataactataacagcctagtcagatagtat
tctaaagtactgtgtgttatttttttgcccattaactatttatttctctt
ctacttatctgatgttttgacagttaaattttcactaaagaacaaattct
atatcacattgattaaggaagtgcagacgtttgctttaaacattataagt
cacagctgaaagtacatagggaatagttacattaggagaattcaaaacaa
tttcattacaacaattgttttagcatgcacaaggtgaaaatgactgatct
aatgattatttcctttatacttagtaatgcaaatagctgaaagtgacctt
tgttacccattggaaaagtgactggttatggtatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45209665_45210802
seq2: B6Ng01-004J16.g_66_1202 (reverse)

seq1  ATGATA-CATAACAATTCACTTTTCCAAATGGGT-ACAAAGGTCACTTTC  48
      |||||| |||||| | |||||||||| ||||||| |||||||||||||||
seq2  ATGATACCATAACCAGTCACTTTTCC-AATGGGTAACAAAGGTCACTTTC  49

seq1  AGACTATTTTGCATTACTAAGTAATAAGGGAAATAATTCATTTTAGATCA  98
      || ||| ||||||||||||||| |||| |||||||| |||  ||||||||
seq2  AG-CTA-TTTGCATTACTAAGT-ATAAAGGAAATAA-TCA--TTAGATCA  93

seq1  GTCATTTTCACC-TGTGCATGCTTAAACATTTGTTGTAATGAAATTGTTT  147
      |||||||||||| |||||||||| ||||| ||||||||||||||||||||
seq2  GTCATTTTCACCTTGTGCATGCTAAAACAATTGTTGTAATGAAATTGTTT  143

seq1  TGAA-TCTCTAATTGTAACTATT-CCTATGTACTTTCAGCTTGTGACTTA  195
      |||| ||||  | |||||||||| |||||||||||||||| |||||||||
seq2  TGAATTCTCCTAATGTAACTATTCCCTATGTACTTTCAGC-TGTGACTTA  192

seq1  TAATGTTTAAAGCAAACGTCTGCACTTCCTTAATC-ATGTGATATAGAAT  244
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAATGTTTAAAGCAAACGTCTGCACTTCCTTAATCAATGTGATATAGAAT  242

seq1  TTGTTCTTTAGTGAAAATTTAACTGTCAAAACATCAGATAAGTAGAAGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTAGTGAAAATTTAACTGTCAAAACATCAGATAAGTAGAAGAG  292

seq1  AAATAAATAGTTAATGGGC-AAGAAATAACACACAGTACTTTAGAATACT  343
      ||||||||||||||||||| || |||||||||||||||||||||||||||
seq2  AAATAAATAGTTAATGGGCAAAAAAATAACACACAGTACTTTAGAATACT  342

seq1  ATCTGACTAGGCTGTTATAGTTATTTAATTTTTTGACTCATTTTAGCTTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACTAGGCTGTTATAGTTATTTAATTTTTTGACTCATTTTAGCTTA  392

seq1  ATTATTTTTACAGATTAATTTGTTCACATATTTAAACATCTTTGTGACAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTACAGATTAATTTGTTCACATATTTAAACATCTTTGTGACAA  442

seq1  ATCAATATACATAAAATTTTCACTTTTGAAGATAAAATTTTGTTGACTAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATACATAAAATTTTCACTTTTGAAGATAAAATTTTGTTGACTAA  492

seq1  AGTTTGTTATCTATTTTCTTTTTATTACTATTCTTTTTAAGAATATTTGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTATCTATTTTCTTTTTATTACTATTCTTTTTAAGAATATTTGT  542

seq1  ATAGATTGGAAGATAGCACTGATATCTAGAGAAATAGGCATATTTATTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTGGAAGATAGCACTGATATCTAGAGAAATAGGCATATTTATTTA  592

seq1  CACAGCAGTGTAAAAATATGGCAGAGGAGTTCAGAAAGGAGTATGTGGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGTGTAAAAATATGGCAGAGGAGTTCAGAAAGGAGTATGTGGTT  642

seq1  GCGGGTTCTGCCTCTTCTTTCTGAGTATCCACCAGTACACAGGTTTGGAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTTCTGCCTCTTCTTTCTGAGTATCCACCAGTACACAGGTTTGGAG  692

seq1  AGGACATGAAGAAGTCTGGAAAGTGTGGGGTCTGCAACTGTGGTGTTAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGAAGAAGTCTGGAAAGTGTGGGGTCTGCAACTGTGGTGTTAAA  742

seq1  ATTTAAATAAACCTAAGATTGCTCCTGCTATGTGGTCTCACCCAGTTCCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAAACCTAAGATTGCTCCTGCTATGTGGTCTCACCCAGTTCCC  792

seq1  ATGGCTAACTTCACCAAGCGCTCCAGTCTCCTTCTGTTCCTTGTCCTGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAACTTCACCAAGCGCTCCAGTCTCCTTCTGTTCCTTGTCCTGTG  842

seq1  CTACAGTCCGAGCCCCTGCCCACTGCCCATTCCTCTGGTTGGCTTTGGTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCCGAGCCCCTGCCCACTGCCCATTCCTCTGGTTGGCTTTGGTA  892

seq1  AGCTTCCTAGAATGTGTCCCGTCCAAGAACTGGAACTACAGATAATTACG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTAGAATGTGTCCCGTCCAAGAACTGGAACTACAGATAATTACG  942

seq1  GTTCCACCATCCATCCACCTCTGCCTCAAGCTCTACCAATGGCAGCCACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACCATCCATCCACCTCTGCCTCAAGCTCTACCAATGGCAGCCACC  992

seq1  TGGCTGCACCCTTTCACTTGCCCACCTGAATCTTAGCGAATGGAAAACAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCACCCTTTCACTTGCCCACCTGAATCTTAGCGAATGGAAAACAC  1042

seq1  AAAACAATCTTAATAATTAAAATCAACCAGATGGCACAACTGCTGGACAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATCTTAATAATTAAAATCAACCAGATGGCACAACTGCTGGACAC  1092

seq1  AGAATCTATTGTCCTAAACTCATCAGCTATTCTATGTTGGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTATTGTCCTAAACTCATCAGCTATTCTATGTTGGAATTC  1137