BAC Information

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BAC

Clone NameB6Ng01-005I04
Chromosome15 (Build37)
Map Location 67,465,706 - 67,614,442
singlet/doubletdoublet
Overlap genenone
Upstream genePhf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000, EG665945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005I04.bB6Ng01-005I04.g
ACCDH842627DH842628
length857657
definitionDH842627|Mus musculus domesticus DNA, BAC clone: B6Ng01-005I04, 5' end.DH842628|Mus musculus domesticus DNA, BAC clone: B6Ng01-005I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,613,585 - 67,614,442)(67,465,706 - 67,466,358)
sequence
gaattcataagcagtaagtgatcaccgtgcactggtctggacactgagac
tatgcagcagcgagaacgatacttgttatacaaactcatgagttgccagg
aaacagagatgtagcaaaacagctgggtagatgcattcatcaacctttat
tgagggaacacctgccaggcaccaataaactactgtacaaattgacgtaa
ttacagcaccttgtccctgatatcagaggcagtaaagtctaggggaggag
acaggtactaaataaatctctgcaggatatcctgggagaattttctgtcc
actggctgcacatgcctggaatgaattcctggtgagctaacttgaggtag
agattaggaatattgtgataatccactgaacagttcttggagggctatca
ccccacactgtagacaccatgacagatggtctagcaatgggacatggggt
gtttgaaaaaagatattcaggaagctatgggatagggaagtctgaattca
tctggatttgagaaagtggaattgccccacaaagcttctcagaggaaatg
gctttgtaaaaaaagaagatagtctcccaatagatatgttaaggcagagt
gagcaaaagtaacaggggtccagctcagtgggaggatcaaggagcatggc
tgaatagcaaagactagggagccctataggagggagcctccatcacacaa
gaggtcaagaaacaatcctagcccacgcatgcatggaataggaaccagag
tcattgtgcttcctctgtgtgaagatgaggagagcagttggtggaagtgc
tgactctgaccttaaccaagctgactcttagggaagagaaacacccctaa
gtctaaa
gaattctttcttacaaatgagtctaaatgattaacatttgcaattgttct
tctgaatataaatacagaatatagagggaaattttctgcactgttcactg
agaaaggaaagaataaaagagagccatatacaggcaaggtatttcatttc
acatctattaaagaaggcaagatgtttcaaaaccacacgtagtgtttttt
ctcttattccagccacctaacatcacagaccaattctgctctgctgcgca
ggcaatattctgcttcatttgacccagtcacgtcttcaatcttgttaaac
tacagagcacaacaaaaccaacttcaagaaaggttaactgaggccttcag
attgattgaaagtgcttgtcaagggtgctgtccctcaccatgtacaatgg
gttttcattagaattttgttgtctgccgtggcgtagttggaaacattcac
ttgatggattaatcaatttctgagctaatgcattcacgtgtggtaatgac
ttgctcaaatgcctctctggctggctgaatgggcttaaaggaattaagta
ggaccacgaaggaaccaaactttcaattaatgaagaaagttgcaaagtgt
ttcttttctaacttaggaaatgaaccaagcctgataatttcctttctatt
ttccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67613585_67614442
seq2: B6Ng01-005I04.b_48_904 (reverse)

seq1  TTTAGACTTAGGGGTGTTTTCTCTTCCCTAAGAGTCAGCTTGGTTAAGGT  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTAGACTTAGGGGTG-TTTCTCTTCCCTAAGAGTCAGCTTGGTTAAGGT  49

seq1  CAGAGTCAGCACTTCCACCAACTGCTCTCCTCATCTTCACACAGAGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCAGCACTTCCACCAACTGCTCTCCTCATCTTCACACAGAGGAAG  99

seq1  CACAATGACTCTGGTTCCTATTCCATGCATGCGTGGGCTAGGATTGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGACTCTGGTTCCTATTCCATGCATGCGTGGGCTAGGATTGTTTC  149

seq1  TTGACCTCTTGTGTGATGGAGGCTCCCTCCTATAGGGCTCCCTAGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTCTTGTGTGATGGAGGCTCCCTCCTATAGGGCTCCCTAGTCTTT  199

seq1  GCTATTCAGCCATGCTCCTTGATCCTCCCACTGAGCTGGACCCCTGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCAGCCATGCTCCTTGATCCTCCCACTGAGCTGGACCCCTGTTAC  249

seq1  TTTTGCTCACTCTGCCTTAACATATCTATTGGGAGACTATCTTCTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCACTCTGCCTTAACATATCTATTGGGAGACTATCTTCTTTTTT  299

seq1  TACAAAGCCATTTCCTCTGAGAAGCTTTGTGGGGCAATTCCACTTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCCATTTCCTCTGAGAAGCTTTGTGGGGCAATTCCACTTTCTCA  349

seq1  AATCCAGATGAATTCAGACTTCCCTATCCCATAGCTTCCTGAATATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGATGAATTCAGACTTCCCTATCCCATAGCTTCCTGAATATCTTT  399

seq1  TTTCAAACACCCCATGTCCCATTGCTAGACCATCTGTCATGGTGTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACACCCCATGTCCCATTGCTAGACCATCTGTCATGGTGTCTACA  449

seq1  GTGTGGGGTGATAGCCCTCCAAGAACTGTTCAGTGGATTATCACAATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGTGATAGCCCTCCAAGAACTGTTCAGTGGATTATCACAATATT  499

seq1  CCTAATCTCTACCTCAAGTTAGCTCACCAGGAATTCATTCCAGGCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCTCTACCTCAAGTTAGCTCACCAGGAATTCATTCCAGGCATGTG  549

seq1  CAGCCAGTGGACAGAAAATTCTCCCAGGATATCCTGCAGAGATTTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTGGACAGAAAATTCTCCCAGGATATCCTGCAGAGATTTATTTA  599

seq1  GTACCTGTCTCCTCCCCTAGACTTTACTGCCTCTGATATCAGGGACAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGTCTCCTCCCCTAGACTTTACTGCCTCTGATATCAGGGACAAGG  649

seq1  TGCTGTAATTACGTCAATTTGTACAGTAGTTTATTGGTGCCTGGCAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAATTACGTCAATTTGTACAGTAGTTTATTGGTGCCTGGCAGGTG  699

seq1  TTCCCTCAATAAAGGTTGATGAATGCATCTACCCAGCTGTTTTGCTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAATAAAGGTTGATGAATGCATCTACCCAGCTGTTTTGCTACAT  749

seq1  CTCTGTTTCCTGGCAACTCATGAGTTTGTATAACAAGTATCGTTCTCGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTCCTGGCAACTCATGAGTTTGTATAACAAGTATCGTTCTCGCT  799

seq1  GCTGCATAGTCTCAGTGTCCAGACCAGTGCACGGTGATCACTTACTGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATAGTCTCAGTGTCCAGACCAGTGCACGGTGATCACTTACTGCTT  849

seq1  ATGAATTC  858
      ||||||||
seq2  ATGAATTC  857

seq1: chr15_67465706_67466358
seq2: B6Ng01-005I04.g_69_724

seq1  GAATTCTTTCTTACAAATGAGTCTAAATGATTAACATTTGCAATTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTACAAATGAGTCTAAATGATTAACATTTGCAATTGTTCT  50

seq1  TCTGAATATAAATACAGAATATAGAGGGAAATTTTCTGCACTGTTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATAAATACAGAATATAGAGGGAAATTTTCTGCACTGTTCACTG  100

seq1  AGAAAGGAAAGAATAAAAGAGAGCCATATACAGGCAAGGTATTTCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAAGAATAAAAGAGAGCCATATACAGGCAAGGTATTTCATTTC  150

seq1  ACATCTATTAAAGAAGGCAAGATGTTTCAAAACCACACGTAGTGTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTAAAGAAGGCAAGATGTTTCAAAACCACACGTAGTGTTTTTT  200

seq1  CTCTTATTCCAGCCACCTAACATCACAGACCAATTCTGCTCTGCTGCGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTCCAGCCACCTAACATCACAGACCAATTCTGCTCTGCTGCGCA  250

seq1  GGCAATATTCTGCTTCATTTGACCCAGTCACGTCTTCAATCTTGTTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATATTCTGCTTCATTTGACCCAGTCACGTCTTCAATCTTGTTAAAC  300

seq1  TACAGAGCACAACAAAACCAACTTCAAGAAAGGTTAACTGAGGCCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCACAACAAAACCAACTTCAAGAAAGGTTAACTGAGGCCTTCAG  350

seq1  ATTGATTGAAAGTGCTTGTCAAGGGTGCTGTCCCTCACCATGTACAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGAAAGTGCTTGTCAAGGGTGCTGTCCCTCACCATGTACAATGG  400

seq1  GTTTTCATTAGAATTTTGTTGTCTGCCGTGGCGTAGTTGGAAACATTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTAGAATTTTGTTGTCTGCCGTGGCGTAGTTGGAAACATTCAC  450

seq1  ATGATGGATTAATCAATTTCTGAGCTAATGCATTCACGTGTGGTAATGAC  500
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGATTAATCAATTTCTGAGCTAATGCATTCACGTGTGGTAATGAC  500

seq1  TTGCTCAAATGCCTCTCTGGCTGGCTGAATGGGCTTAAAGGAATTAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAAATGCCTCTCTGGCTGGCTGAATGGGCTTAAAGGAATTAAGTA  550

seq1  GGACCACGAAGGAACCAAACTTTCAATTAATGAAGAAAGTTGCAAAGTG-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGACCACGAAGGAACCAAACTTTCAATTAATGAAGAAAGTTGCAAAGTGT  600

seq1  TTCTTTTCTAACCTAGGAAATGAACCAAGCCTGATAATTTCC-TTCTATT  648
      |||||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  TTCTTTTCTAACTTAGGAAATGAACCAAGCCTGATAATTTCCTTTCTATT  650

seq1  TCCCC-  653
      | ||| 
seq2  TTCCCC  656