BAC Information

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BAC

Clone NameB6Ng01-006B18
Chromosome15 (Build37)
Map Location 89,500,898 - 89,644,196
singlet/doubletdoublet
Overlap geneLOC676575, Syt10
Upstream geneBrd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a
Downstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006B18.bB6Ng01-006B18.g
ACCDH843061DH843062
length1,005231
definitionDH843061|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B18, 5' end.DH843062|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,643,177 - 89,644,196)(89,500,898 - 89,501,098)
sequence
gaattcctttgtttaagggattgtgtttcacaggacagacctgaactaca
tgctgatgcatcctggtttgatctgaaacagcccatgactttagaagctt
ctatggaatgtgcatggttacagcatatgggtgctctggatcagaagaca
cctctccctatccaaaatagttttttcatgacatgtacttttttcaggta
cgacatcatacgaacttgaaactttgaaaagcaacccaaacgccctctaa
ataaagaaatcaacaatgctgccaattgtgtaaatgttttggttcctgtt
tctgctctgaatgcataaaaataattatgattacactgaatttttatttt
gacactgattttgctccatgatttgtctcaatgcatgacctttattgttt
tgaattttttaattatcactgtgtttgtgaatgtgtctgcatgtgtgtgt
gtttctgtgtgtgtacccacacatgcatgcaaagtatgtacatgtaccat
gatacgtacttacaaaggtcagagaacaattccttggagttggctctttc
ctaccgtgacatggggcccttggatctaattcatgttcccaggcttgaac
tgcgcatggtgttacctgctgaacagtatcattggcccaaatgtacagta
tctaaatatgtaatccaactcattaactattctcttcgtactgacttaca
ggaggcatcaattttgtcttaaaaaagggaattattttaattcacttata
taaggctgtctgtcctgcctgggtttacttagtaggaactaacgtctcac
tctcagatttcattactaacttgtttctgattgatatatgtaaagtggga
ccatttaacttcctacctccgggtcgcgttcataccccaagcatttcgtc
taactttggctgaaattgatgtgaatagagacacagttatttttaaaaga
aaaaagaaagttaaattcaaattactccttcctctgaagccggcgatcaa
gtaat
ccggggggaaatatctaggtgcaataaaaagaggagatgaccagagttcc
tttggatgattgcctgacccgtccgtgtctcttatgaggtcaaggataag
tatcggtgaggtaggaggggagcctcggtgggcccatgttgaggcatccc
ttccccctgagataccagccacaggaatagagtttatgtagggcatggaa
aggggagttgagaagggaggagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89643177_89644196
seq2: B6Ng01-006B18.b_43_1047 (reverse)

seq1  ATTACTTCAAACACCGGCCTCAGA-GAAGGAGTTATTTTGAATTTATAAA  49
      |||||||  | | ||||| ||||| ||||||| || |||||||||    |
seq2  ATTACTT-GATCGCCGGCTTCAGAGGAAGGAG-TAATTTGAATTT----A  44

seq1  ATGTTCTTTTTTCTTTTAAAAATAAACTGTTGTCTCTATTCAACATCAAT  99
      |  |||||||||||||||||||| ||||| ||||||||||| ||||||||
seq2  ACTTTCTTTTTTCTTTTAAAAAT-AACTG-TGTCTCTATTC-ACATCAAT  91

seq1  TTCAGTAAAATGTTAAGACAAACTGATAAGTGTATCAACACAACCCGAAG  149
      |||||  ||| ||| |||| || || |  | |||| ||| | ||||| ||
seq2  TTCAGCCAAA-GTT-AGACGAAATGCTTGGGGTATGAACGCGACCCGGAG  139

seq1  GTAAAAAGTAAAATGCTCCCACTTTAAAATTAATGAATCA-AAACAAGTT  198
      |||  |||| ||||| ||||||||| | ||  || ||||| |||||||||
seq2  GTAGGAAGTTAAATGGTCCCACTTT-ACATATATCAATCAGAAACAAGTT  188

seq1  AGTAATCAAATCCGAGAGCGAGACGTTAATTCCTCTTCTGTAATTGTATG  248
      |||||| ||||| ||||| ||||||||| |||||  |  ||||    | |
seq2  AGTAATGAAATCTGAGAGTGAGACGTTAGTTCCTACTAAGTAAACCCA-G  237

seq1  GCAGGACAGACAGCCTTATATAAGTGAATTAAAATAATTCCCTTTTTAAA  298
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  GCAGGACAGACAGCCTTATATAAGTGAATTAAAATAATTCCCTTTTT-TA  286

seq1  AAACAAAATTTATGCTTCATCTAAGTGTGTAAGAAGAAAATAGTTAATTA  348
      | |||||||| |||| || | |||||  ||| ||||| |||||||||| |
seq2  AGACAAAATTGATGCCTCCTGTAAGTCAGTACGAAGAGAATAGTTAATGA  336

seq1  AATGGATTACATATTTAGATACTGTACATTTTGGCCAATGATACTGTTCA  398
        ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTGGATTACATATTTAGATACTGTACATTTGGGCCAATGATACTGTTCA  386

seq1  GCATGTAAAAACACTTGCAGTACAAGCCTGGGAACATGAATTAGATTCAA  448
      ||| |||| | ||   ||||| |||||||||||||||||||||||| |||
seq2  GCAGGTAACACCATGCGCAGTTCAAGCCTGGGAACATGAATTAGATCCAA  436

seq1  GGGCCCCATGTCAGGGTAGGAAAGAACCAACTCCACGGAATTGTTCTCTG  498
      ||||||||||||| ||||||||||| ||||||||| ||||||||||||||
seq2  GGGCCCCATGTCACGGTAGGAAAGAGCCAACTCCAAGGAATTGTTCTCTG  486

seq1  ACCTTTGTAAGTACCTATCATGGTACATGTACATACTTTGCATGCATGTG  548
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACCTTTGTAAGTACGTATCATGGTACATGTACATACTTTGCATGCATGTG  536

seq1  TGGGTACACACACAGAAACACACACACATGCAGACACATTCACAAACACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACACACACAGAAACACACACACATGCAGACACATTCACAAACACA  586

seq1  CTGATAATTAAAAAATTCAAAACAATAAAGGTCATGCATTGAGACAAATC  648
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAATTAAAAAATTCAAAACAATAAAGGTCATGCATTGAGACAAATC  636

seq1  ATGGAGCAAAATCAGTGTCAAAATAAAAATTCAGTGTAATCATAATTATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAAAATCAGTGTCAAAATAAAAATTCAGTGTAATCATAATTATT  686

seq1  TTAATGCATTCAGAGCAGAAACAGGAAACCAAAACATTTACATAATTGGC  748
      || |||||||||||||||||||||| |||||||||||||||| |||||||
seq2  TTTATGCATTCAGAGCAGAAACAGG-AACCAAAACATTTACACAATTGGC  735

seq1  AGCATTGTTGATTTCTTTATTTCTATTCTGTTTGTGCTGCTTTCCAAAGT  798
      ||||||||||||||||||||||  |    ||||| | |||||| ||||||
seq2  AGCATTGTTGATTTCTTTATTTAGAGGGCGTTTGGGTTGCTTTTCAAAGT  785

seq1  TTCAATACTGTATGATTTTGTAATTGAAAAAAGTACATATCATGAAAAAA  848
      |||||    ||||||| | |||  |||||||||||||| |||||||||||
seq2  TTCAAGTTCGTATGATGTCGTACCTGAAAAAAGTACATGTCATGAAAAAA  835

seq1  ATAATTCTAATATGGAGAATTATTTTTTGATCCTTTAGCACCCATATACT  898
       || ||   ||| |||||  | | || ||||||   ||||||||||| ||
seq2  CTATTTTGGATAGGGAGAGGTGTCTTCTGATCC-AGAGCACCCATATGCT  884

seq1  GTAACCATGCACATTCCATAGAAGCTTCTAAAGTCATGGGCTGTTTCAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCATGCACATTCCATAGAAGCTTCTAAAGTCATGGGCTGTTTCAGA  934

seq1  TCAAACCACGATGCATCAGCATATAGTTCAGGTTTGACCTGTGAAATAAA  998
      |||||||| ||||||||||||| |||||||||| || ||||||||| | |
seq2  TCAAACCAGGATGCATCAGCATGTAGTTCAGGTCTGTCCTGTGAAACACA  984

seq1  ATCACTTTAAACAAAGGAATTC  1020
      ||| | ||||||||||||||||
seq2  ATC-CCTTAAACAAAGGAATTC  1005

seq1: chr15_89500898_89501098
seq2: B6Ng01-006B18.g_100_300

seq1  GAGGAGATGACCAGGGTTCC-TGGTATATTTGGCCTGACCCATCCATGTC  49
      |||||||||||||| ||||| | | ||  || ||||||||| ||| ||||
seq2  GAGGAGATGACCAGAGTTCCTTTGGATGATT-GCCTGACCCGTCCGTGTC  49

seq1  TCTTATGAGGTCAAGGATAAGTATCGGTGAGGTAGGAGGGGAGCCTCGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAGGTCAAGGATAAGTATCGGTGAGGTAGGAGGGGAGCCTCGGT  99

seq1  GGGCCCATGTTGAGGCATCCCTTCCCCCTGAGATACCAGCCACAGGAATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCATGTTGAGGCATCCCTTCCCCCTGAGATACCAGCCACAGGAATA  149

seq1  GAGTTTATGTAGGGCATGGAAAGGGGAGTTGAGAAGGGAGGAGAGAGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATGTAGGGCATGGAAAGGGGAGTTGAGAAGGGAGGAGAGAGAGA  199

seq1  GA  201
      ||
seq2  GA  201