BAC Information

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BAC

Clone NameB6Ng01-006D11
Chromosome15 (Build37)
Map Location 36,774,223 - 36,775,273
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13b, Cox6c, Rgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz
Downstream geneZfp706, LOC670911, LOC667492, LOC100041288, Grhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006D11.bB6Ng01-006D11.g
ACCDH843139DH843140
length1,0401,041
definitionDH843139|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D11, 5' end.DH843140|Mus musculus domesticus DNA, BAC clone: B6Ng01-006D11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgcagccataaacaaaaatgaaatcatgacacaggaaaatgg
acacaactggaaatcattatgctgagcccaataaggagactgggaaaggt
aactgctctgcttttgttcatacatagaacctagatttgacattgtttat
atgcatgcatatatgtgtgtgcttatatatgtgtatgtttatgggtcaca
agactagaaaagaaactataagatagcaggaagagctcttagtaggaaat
agagaaggtggtggataaactgtaataaagtaagaattgggagtaactgg
gaaataaagggaacagggacagcagtggaaagacacatgagagcaaagtg
aaatggcatggggactgtcccttttcctttccctttccctttccctttcc
ctttccctttcccaaaccctctccggggccctattgcgttgtggctgctg
ctatggttggtgtcatgggaggaaattgtagtgatactgggttggtaccc
ggattaaacccgattacacctaagctccgtctcctgaaaaggaaagaact
ataggtcttttttcatccaatccagtctatcttcaaaaccatgtcaatca
tgttggaaattgtatcccttggctctgtcaatctgaaagcctcactgctc
tcccctgtgggtagtctccaatatttcagaaaggtggtcttaaccttcct
gagctagccggtcagagattccatagtctctaagacccctgaaatttcgt
tcgaaagcaagatttccatatggctatcagttcatcactagcagacaggc
aaggacgctcttagacagttccctcggtaaggcatacacgcaacctaaga
agatagattgttcgtgcgcatgatggaagcacatgtctcaagacctacag
ccatgtgtcgcctccccgtccctacttaccactcatcattatgtcgacct
accgcctatctcaggctagggactaatgccatacaaaggaaacgactgtg
gacagtctgcctcagtttggctaccttaagggtgaatctc
gaattccagaacagccaggactacacagagaatccctgtctaggaaaaaa
aaagaaaaaaaaatatatatacatacatacatacatacatatatatgtat
gtgcgtgtatacaattgggcatgcacacacacatatatcctatgtttggc
atgttcatctgttgcctcccgccatggatgttatgctgaagacagagatg
tttgtcttcttgggttacttctagattgccaggatgtagtattgtgccta
ggacacaaggtgttccaatagttactaatagaaggactgatgataccagt
ggctgtgtacctcacaccctgcagccctcaggaagacgcacaaaccaact
gccctaagctaatcaccccaggatgtataagggatgaatgtgggttcagc
cttcatcaatattctcaaaaccgagtagcaggcttaggaaaaccaccaga
tctttgactgcagaaggatgcctcctccacttcattctggcataccagaa
gtgtctgaataggaagtatcccaataatttgtctaaagaaaggtattttt
tgctttagagaataagcaagatcaagtaactgttcggggactacagaagc
caggatctcagcccgctctggtttcctggaggcggcaaagaccacacccc
acccatcactaagaggcccttccaggaaggcagcacctgtaccctaactg
tggaactgtgccatgtggcccttccaggtcttctggccccaggtatccgg
aaaggtgtggctctcctgtaggtcacaggatgctcggctcaggagatccc
tggctgacatactatacctggtctaggaagcaaacgcttccagttagagg
ggtgcttcaagacagagtgagtagcagaagttagcagaagttcatggtgg
tagaaactagggacagaagaaaggccctcagagaaggccaaagaggccac
tgtgtgacctattagtctctgacctgcatgatctagggacttaagcttag
ctagtccacggttttgtttttttgagttcccattatcttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_36774223_36775273
seq2: B6Ng01-006D11.g_66_1106 (reverse)

seq1  CTAAGGGTAATGGGAACTTCCAGAAAACAAAACCTGTGGACTAGCTAGGC  50
      |||| | |||||||||| || | ||||||||||| |||||||||||| ||
seq2  CTAA-GATAATGGGAAC-TCAAAAAAACAAAACC-GTGGACTAGCTAAGC  47

seq1  CTCTAAGTCCCTAGAATCATGGCAGGTCAAGGGACCTAAAGGTCACACAG  100
         ||||||||||| ||||| ||||||| || |||  | |||||||||||
seq2  --TTAAGTCCCTAG-ATCAT-GCAGGTC-AGAGACTAATAGGTCACACAG  92

seq1  TGGCCTCCTTTGGCCTTCTCCTGA-GGCCTTTCTTCTGTTCCCTAGTTTC  149
      |||||| |||||||||||| |||| ||||||||||||| |||||||||||
seq2  TGGCCT-CTTTGGCCTTCT-CTGAGGGCCTTTCTTCTG-TCCCTAGTTTC  139

seq1  TACCACCATGAACTTCTGCTAACTTCTGCCTACTCACTCTGTCTTGGAGC  199
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  TACCACCATGAACTTCTGCTAACTTCTG-CTACTCACTCTGTCTTGAAGC  188

seq1  A-CCCTCTAACTGGAAGCGTTTGCTTCCTAGACCAGGTATAGTATGTCAG  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCTAACTGGAAGCGTTTGCTTCCTAGACCAGGTATAGTATGTCAG  238

seq1  CCAGGGATCTCCTGAGCCGAGCATCCTGTGACCTACAGGAGAGCCACACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATCTCCTGAGCCGAGCATCCTGTGACCTACAGGAGAGCCACACC  288

seq1  TTTCCGGATACCTGGGGCCAGAAGACCTGGAAGGGCCACATGGCACAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGGATACCTGGGGCCAGAAGACCTGGAAGGGCCACATGGCACAGTT  338

seq1  CCACAGTTAGGGTACAGGTGCTGCCTTCCTGGAAGGGCCTCTTAGTGATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTAGGGTACAGGTGCTGCCTTCCTGGAAGGGCCTCTTAGTGATG  388

seq1  GGTGGGGTGTGGTCTTTGCCGCCTCCAGGAAACCAGAGCGGGCTGAGATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTGTGGTCTTTGCCGCCTCCAGGAAACCAGAGCGGGCTGAGATC  438

seq1  CTGGCTTCTGTAGTCCCCGAACAGTTACTTGATCTTGCTTATTCTCTAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCTGTAGTCCCCGAACAGTTACTTGATCTTGCTTATTCTCTAAA  488

seq1  GCAAAAAATACCTTTCTTTAGACAAATTATTGGGATACTTCCTATTCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAATACCTTTCTTTAGACAAATTATTGGGATACTTCCTATTCAGA  538

seq1  CACTTCTGGTATGCCAGAATGAAGTGGAGGAGGCATCCTTCTGCAGTCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGGTATGCCAGAATGAAGTGGAGGAGGCATCCTTCTGCAGTCAA  588

seq1  AGATCTGGTGGTTTTCCTAAGCCTGCTACTCGGTTTTGAGAATATTGATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGGTGGTTTTCCTAAGCCTGCTACTCGGTTTTGAGAATATTGATG  638

seq1  AAGGCTGAACCCACATTCATCCCTTATACATCCTGGGGTGATTAGCTTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAACCCACATTCATCCCTTATACATCCTGGGGTGATTAGCTTAG  688

seq1  GGCAGTTGGTTTGTGCGTCTTCCTGAGGGCTGCAGGGTGTGAGGTACACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTGGTTTGTGCGTCTTCCTGAGGGCTGCAGGGTGTGAGGTACACA  738

seq1  GCCACTGGTATCATCAGTCCTTCTATTAGTAACTATTGGAACACCTTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGTATCATCAGTCCTTCTATTAGTAACTATTGGAACACCTTGTG  788

seq1  TCCTAGGCACAATACTACATCCTGGCAATCTAGAAGTAACCCAAGAAGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCACAATACTACATCCTGGCAATCTAGAAGTAACCCAAGAAGAC  838

seq1  AAACATCTCTGTCTTCAGCATAACATCCATGGCGGGAGGCAACAGATGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTCTGTCTTCAGCATAACATCCATGGCGGGAGGCAACAGATGAA  888

seq1  CATGCCAAACATAGGATATATGTGTGTGTGCATGCCCAATTGTATACACG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAAACATAGGATATATGTGTGTGTGCATGCCCAATTGTATACACG  938

seq1  CACATACATATATATGTATGTATGTATGTATGTATATATATTTTTTTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATATATATGTATGTATGTATGTATGTATATATATTTTTTTTTC  988

seq1  TTTTTTTTTCCTAGACAGGGATTCTCTGTGTAGTCCTGGCTGTTCTGGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCTAGACAGGGATTCTCTGTGTAGTCCTGGCTGTTCTGGAA  1038

seq1  TTC  1051
      |||
seq2  TTC  1041