BAC Information

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BAC

Clone NameB6Ng01-006F12
Chromosome15 (Build37)
Map Location 25,247,517 - 25,248,521
singlet/doubletsinglet
Overlap gene4930445E18Rik
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik
Downstream geneBasp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006F12.bB6Ng01-006F12.g
ACCDH843232DH843233
length1,0011,160
definitionDH843232|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F12, 5' end.DH843233|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttcaatttcatttaatgtttcatattagagaatttaaaaat
gcagagaatttgaaaatgtttcaagaaatgcccatgaacccatcccccag
cctttgctaccaacattttctttgacttggtatcaaagatgactgctcat
ctttctaagaatgcaaagaaaacttaaatcagtttacttttagggtcaga
tttgtggactctagtttcctggtttggaagcacctgtcatcacttccgag
accagcatttcctggttttggagcatctgccttaacttccagggtcagca
gtagtgatgtcggtccagtcaacccaaagctgcttgttgacttttgtgga
tgtaccgcgtctccacagagcctggcggtgaagctgcacaggaaccatat
gggcggtttgttaaactgatgctctcccagacctcactccctagaactct
gagttagtcaatctcaaaaagcaattatggtcgtgattttgatgtgttag
tgaatttggaagccccaggccttgatagaactgaaaaccaatatcttaga
gcttttgaacaaagaaaggaatgggggaggggtcagtaatgtgacagata
accaagcacaaagctctgtgatctacattcttagagtgggatagataagt
tattagttcttttgcaggaccagagccataaactgagtccaagagaatca
gcaatgtctgatgaagccaagaaataggagttaggtgattcaaattggaa
atctactggatggagagtgtagctgcatggataggagtggagagtcagca
atgagctcactggggctgtgggtttgggttggaggtcaatgttagacaga
gcaagtaagcttcacaaacagttactgagcagccccgagggtcactagcc
tctggtcgactctaacttccttccgtgggttttagtttgactctgtcaat
attcttaacctgcacttcatggatggagccctttctgctgggaggaagca
t
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatatccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccatttgcatacactagcaagattttattgaa
aggacgcagatgtagctgtctcttgtgagactattgccggggctcatcaa
acacagaagtggatgctcacagtcagcctaatggatggatcatagggctt
ccaatggaaggagcctagagaaagtagccaaggagctaaagggatttgca
accctataggtgaacaacattatgagctaccagtacccggagctctttga
ctctagctgctataatcaaagatggcctattcgcattctcggcagaaagc
atggacttgcaactttattgcctgtctgtaatcaggccaaaaggtgaatg
gggtgcaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25247517_25248521
seq2: B6Ng01-006F12.b_43_1043 (reverse)

seq1  ATGCTTCCTCCCAGCAG-AAGGGCTCCATCCACTGAGCTGCAGGTTAAGA  49
      ||||||||||||||||| |||||||||||||| |||  ||||||||||||
seq2  ATGCTTCCTCCCAGCAGAAAGGGCTCCATCCA-TGAAGTGCAGGTTAAGA  49

seq1  ATATTGGACAGAGTCAAACTAAAACCCACGGAAGGAAGTTAGAGTCTGAC  99
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  ATATT-GACAGAGTCAAACTAAAACCCACGGAAGGAAGTTAGAGTC-GAC  97

seq1  CAGAGGCTAGTGACCCTCGGGGCTGCTCAGTAACTGTTTGGTGAAGCTTA  149
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGAGGCTAGTGACCCTCGGGGCTGCTCAGTAACTGTTT-GTGAAGCTTA  146

seq1  CCTTGCTCTGTCCTAACATTGACCTCCAA-CCAAACCCACAGCCCCAGTG  198
       |||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  -CTTGCTCTGT-CTAACATTGACCTCCAACCCAAACCCACAGCCCCAGTG  194

seq1  AGCTCATTGCTGACTCTCCACTCCTATCCATGCAGCTACACTCTCCATCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTGCTGACTCTCCACTCCTATCCATGCAGCTACACTCTCCATCC  244

seq1  AGTAGATTTCCAATTTGAATCACCTAACTCCTATTTCTTGGCTTCATCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTTCCAATTTGAATCACCTAACTCCTATTTCTTGGCTTCATCAG  294

seq1  ACATTGCTGATTCTCTTGGACTCAGTTTATGGCTCTGGTCCTGCAAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTGATTCTCTTGGACTCAGTTTATGGCTCTGGTCCTGCAAAAGA  344

seq1  ACTAATAACTTATCTATCCCACTCTAAGAATGTAGATCACAGAGCTTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAACTTATCTATCCCACTCTAAGAATGTAGATCACAGAGCTTTGT  394

seq1  GCTTGGTTATCTGTCACATTACTGACCCCTCCCCCATTCCTTTCTTTGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTTATCTGTCACATTACTGACCCCTCCCCCATTCCTTTCTTTGTT  444

seq1  CAAAAGCTCTAAGATATTGGTTTTCAGTTCTATCAAGGCCTGGGGCTTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTCTAAGATATTGGTTTTCAGTTCTATCAAGGCCTGGGGCTTCC  494

seq1  AAATTCACTAACACATCAAAATCACGACCATAATTGCTTTTTGAGATTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACTAACACATCAAAATCACGACCATAATTGCTTTTTGAGATTGA  544

seq1  CTAACTCAGAGTTCTAGGGAGTGAGGTCTGGGAGAGCATCAGTTTAACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAGAGTTCTAGGGAGTGAGGTCTGGGAGAGCATCAGTTTAACAA  594

seq1  ACCGCCCATATGGTTCCTGTGCAGCTTCACCGCCAGGCTCTGTGGAGACG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCCCATATGGTTCCTGTGCAGCTTCACCGCCAGGCTCTGTGGAGACG  644

seq1  CGGTACATCCACAAAAGTCAACAAGCAGCTTTGGGTTGACTGGACCGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTACATCCACAAAAGTCAACAAGCAGCTTTGGGTTGACTGGACCGACA  694

seq1  TCACTACTGCTGACCCTGGAAGTTAAGGCAGATGCTCCAAAACCAGGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACTGCTGACCCTGGAAGTTAAGGCAGATGCTCCAAAACCAGGAAA  744

seq1  TGCTGGTCTCGGAAGTGATGACAGGTGCTTCCAAACCAGGAAACTAGAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCTCGGAAGTGATGACAGGTGCTTCCAAACCAGGAAACTAGAGT  794

seq1  CCACAAATCTGACCCTAAAAGTAAACTGATTTAAGTTTTCTTTGCATTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATCTGACCCTAAAAGTAAACTGATTTAAGTTTTCTTTGCATTCT  844

seq1  TAGAAAGATGAGCAGTCATCTTTGATACCAAGTCAAAGAAAATGTTGGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGATGAGCAGTCATCTTTGATACCAAGTCAAAGAAAATGTTGGTA  894

seq1  GCAAAGGCTGGGGGATGGGTTCATGGGCATTTCTTGAAACATTTTCAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCTGGGGGATGGGTTCATGGGCATTTCTTGAAACATTTTCAAAT  944

seq1  TCTCTGCATTTTTAAATTCTCTAATATGAAACATTAAATGAAATTGAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCATTTTTAAATTCTCTAATATGAAACATTAAATGAAATTGAAAA  994

seq1  AGAATTC  1005
      |||||||
seq2  AGAATTC  1001