BAC Information

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BAC

Clone NameB6Ng01-006K14
Chromosome15 (Build37)
Map Location 100,423,621 - 100,562,163
singlet/doubletdoublet
Overlap geneDazap2, BC004728, Bin2, Ela1, Galnt6
Upstream geneAqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1
Downstream geneSlc4a8, Scn8a, EG668225, Ankrd33, Acvrl1, Acvr1b, Grasp, Nr4a1, 9430023L20Rik, 6030408B16Rik, Krt80, Krt7, Krt85, Krt83, 1700011A15Rik, 5430421N21Rik, EG574415, Krt84, Krt82, 4732456N10Rik, Krt75, EG432985, EG432986, EG406223, EG432987, Krt6b, Krt6a, Krt5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006K14.bB6Ng01-006K14.g
ACCDH843458DH843459
length876962
definitionDH843458|Mus musculus domesticus DNA, BAC clone: B6Ng01-006K14, 5' end.DH843459|Mus musculus domesticus DNA, BAC clone: B6Ng01-006K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,423,621 - 100,424,492)(100,561,206 - 100,562,163)
sequence
gaattcacaggtgaaaaagctttgtttcaaccgtcaaccttccttgccca
tgaactgtgcctggaaccacccccaccgtgagaactgactgcagccatag
acaagaaaaggcatcagggagaaccatggagaagaatgaacgtgcatatg
acctgtgagggacttcactctgattgtgtttcgaggaagctggtgtgctt
tcttcttttaaggagtaaacagtcatttcagaaaaagaaagtatatagaa
gcataaaaaacaaaacaaaacaaaaaaacccgccaggcatggtggcgcac
gcctttaatcccagcactcgggaggcagaggctgctggatttctgagttt
gaggccagcctggtctacagagtgagttccaggacagccagggctataca
gagaaaccctgtctcaaaaataaacaaacaaacaaacaaaacaaaacccc
taaatcacatgttcaaacacttatcaagtatctgtgcattttaatagatc
tttttggatcttactttttattttatgtgtatgggtgttttgcctgcata
catgtatgtctgtatatacaccacatgcgtacagtgcccatagccccgtt
gcaacttaaaaatcccaaactcaacctccgagaccctagctgacactcgc
tctggagaggtggactgggggtgaccataaactttaataagggacaaatg
aggcctcattacagctgtatctcttggccacaccacccctcagtcgggac
tctcaccagccccatttctcaccccagaagatacctgctcattgacagtc
agagatgagtccgatccagctccggggatccatgctcactgcagggtgtg
ggtaggcaccagcccacaactagtga
gaattctcagacagctagggttacttagagagattctgaatcagatagat
agatagatagatagatagatagatagatagatagatagatagatgacctc
tgacctgcatgtacaacacacacacacaaatcactaaaagaaacagattg
aaaatgatcaaagtgcattatatatacatctacgaagtgtcataatgaaa
cctttgtttcccataactaatgaacgctaatcaacttcttattcccaaag
tgaactcattaataacagcttcagaatttgaggtacacacatcggctggc
actcctcgaaaagccaaacagtctctttcacgctccaaggcagagtaaga
ggtcatgagcctaccctggagcagtctgaggtccctcaggtcaagttggg
acctgactaagatcacacagtgctgaaggtcgaagagctaagtgaaaggg
aggtgggagcaaaggccaaaccaccgagtctcacacccaagggacgagaa
gcaaagacagcggcggcccattatctgcagcaggaaatgttggtgatccc
aaagcctggtaaagtgtcacccttcacctaagtaagcaagctcagtaaac
ttccccgctgtgatctcctggccttcccagaatgcctctggtcccctctg
agcgctcaattcaacgacaggggtgctgggtcctggcccctgagccttag
agactcaaaactgcaaagccattttaacatcaaccaaaacagaaagatcc
attccatttccccccccccccccccgtggtgtttgtttgttttttgggag
gcagagtatcgatatttcatctcaagcctcctttcactgtgttggtcggc
agccacagatcctcctgcattctcctgctttccgaaatgctgggatcaat
gtcctaccagaagcttccgacttggggatcttgtacttcacttctggtat
tctcagagctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_100423621_100424492
seq2: B6Ng01-006K14.b_39_913

seq1  GAATTCACAGGTGAAAAAGCTTTGTTTCAACCGTCAACCTTCCTTGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGTGAAAAAGCTTTGTTTCAACCGTCAACCTTCCTTGCCCA  50

seq1  TGAACTGTGCCTGGAACCACCCCCACCGTGAGAACTGACTGCAGCCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTGCCTGGAACCACCCCCACCGTGAGAACTGACTGCAGCCATAG  100

seq1  ACAAGAAAAGGCATCAGGGAGAACCATGGAGAAGAATGAACGTGCATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAAGGCATCAGGGAGAACCATGGAGAAGAATGAACGTGCATATG  150

seq1  ACCTGTGAGGGACTTCACTCTGATTGTGTTTCGAGGAAGCTGGTGTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAGGGACTTCACTCTGATTGTGTTTCGAGGAAGCTGGTGTGCTT  200

seq1  TCTTCTTTTAAGGAGTAAACAGTCATTTCAGAAAAAGAAAGTATATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTAAGGAGTAAACAGTCATTTCAGAAAAAGAAAGTATATAGAA  250

seq1  GCATAAAAAACAAAACAAAACAAAAAAACCCGCCAGGCATGGTGGCGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAAAACAAAACAAAACAAAAAAACCCGCCAGGCATGGTGGCGCAC  300

seq1  GCCTTTAATCCCAGCACTCGGGAGGCAGAGGCTGCTGGATTTCTGAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTCGGGAGGCAGAGGCTGCTGGATTTCTGAGTTT  350

seq1  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACA  400

seq1  GAGAAACCCTGTCTCAAAAATAAACAAACAAACAAACAAAACAAAACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTGTCTCAAAAATAAACAAACAAACAAACAAAACAAAACCCC  450

seq1  TAAATCACATGTTCAAACACTTATCAAGTATCTGTGCATTTTAATAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACATGTTCAAACACTTATCAAGTATCTGTGCATTTTAATAGATC  500

seq1  TTTTTGGATCTTACTTTTTATTTTATGTGTATGGGTGTTTTGCCTGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGATCTTACTTTTTATTTTATGTGTATGGGTGTTTTGCCTGCATA  550

seq1  CATGTATGTCTGTATATACACCACATGCGTACAGTGCCCTTAGCCCCGTT  600
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATGTATGTCTGTATATACACCACATGCGTACAGTGCCCATAGCCCCGTT  600

seq1  GCAACTTAAAAATCCCAAACTCAACCTCCGAGACCCTAGCTGACACTCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTAAAAATCCCAAACTCAACCTCCGAGACCCTAGCTGACACTCGC  650

seq1  TCTGGAGAGGTGGACT-GGGGTGACCATAAACTTTAATAAGGGACAAATG  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTGGAGAGGTGGACTGGGGGTGACCATAAACTTTAATAAGGGACAAATG  700

seq1  AGGCCTCATTACAGCTGTATCTCTTGGCCACACCACCCCTCAGTCGGGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCATTACAGCTGTATCTCTTGGCCACACCACCCCTCAGTCGGGAC  750

seq1  TCTCACCAGCCCCATTTCTCACCCCAGAAGATACCTGCTCATTGACAGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGCCCCATTTCTCACCCCAGAAGATACCTGCTCATTGACAGTC  800

seq1  AGAGATGAGTCCGATCCAGCTCC-GGGATCCATGCTCACTGCAGGGTGT-  847
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  AGAGATGAGTCCGATCCAGCTCCGGGGATCCATGCTCACTGCAGGGTGTG  850

seq1  GGTAGGCGCCAGCCCACACCTAGTG  872
      ||||||| |||||||||| ||||||
seq2  GGTAGGCACCAGCCCACAACTAGTG  875

seq1: chr15_100561206_100562163
seq2: B6Ng01-006K14.g_69_1030 (reverse)

seq1  GCAGCTCTGAGATTA-CAGAAGTGATGTACCATGATCCCCAAGTTCGGAT  49
      |||||||||||| || ||||||||| ||| || |||||||||| ||||| 
seq2  GCAGCTCTGAGAATACCAGAAGTGAAGTA-CAAGATCCCCAAG-TCGGAA  48

seq1  GCTTTCTGGTA-GACATTGATCCCAGCATTTCGG-AAGCAGGAGGATGCA  97
      || |||||||| |||||||||||||||||||||| ||||||||| |||||
seq2  GC-TTCTGGTAGGACATTGATCCCAGCATTTCGGAAAGCAGGAGAATGCA  97

seq1  GGAGGATCTGTGGCTGCAGA-CAACACAGTGAAAGGAAGCTTGAGATG-A  145
      ||||||||||||||||| || |||||||||||||||| |||||||||| |
seq2  GGAGGATCTGTGGCTGCCGACCAACACAGTGAAAGGAGGCTTGAGATGAA  147

seq1  ATATCGATACTCTGCCT-CCAAAAAACAAACAAACACCAC-GGGGGGGGG  193
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  ATATCGATACTCTGCCTCCCAAAAAACAAACAAACACCACGGGGGGGGGG  197

seq1  GGGGGGAAATGGAATGGATCTTTCTGTTTTGGTTGATGTTAAAATGGCTT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAAATGGAATGGATCTTTCTGTTTTGGTTGATGTTAAAATGGCTT  247

seq1  TGCAGTTTTGAGTCTCTAAGGCTCAGGGGCCAGGACCCAGCACCCCTGTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTTGAGTCTCTAAGGCTCAGGGGCCAGGACCCAGCACCCCTGTC  297

seq1  GTTGAATTGAGCGCTCAGAGGGGACCAGAGGCATTCTGGGAAGGCCAGGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTGAGCGCTCAGAGGGGACCAGAGGCATTCTGGGAAGGCCAGGA  347

seq1  GATCACAGCGGGGAAGTTTACTGAGCTTGCTTACTTAGGTGAAGGGTGAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAGCGGGGAAGTTTACTGAGCTTGCTTACTTAGGTGAAGGGTGAC  397

seq1  ACTTTACCAGGCTTTGGGATCACCAACATTTCCTGCTGCAGATAATGGGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACCAGGCTTTGGGATCACCAACATTTCCTGCTGCAGATAATGGGC  447

seq1  CGCCGCTGTCTTTGCTTCTCGTCCCTTGGGTGTGAGACTCGGTGGTTTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCTGTCTTTGCTTCTCGTCCCTTGGGTGTGAGACTCGGTGGTTTGG  497

seq1  CCTTTGCTCCCACCTCCCTTTCACTTAGCTCTTCGACCTTCAGCACTGTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCTCCCACCTCCCTTTCACTTAGCTCTTCGACCTTCAGCACTGTG  547

seq1  TGATCTTAGTCAGGTCCCAACTTGACCTGAGGGACCTCAGACTGCTCCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTAGTCAGGTCCCAACTTGACCTGAGGGACCTCAGACTGCTCCAG  597

seq1  GGTAGGCTCATGACCTCTTACTCTGCCTTGGAGCGTGAAAGAGACTGTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCTCATGACCTCTTACTCTGCCTTGGAGCGTGAAAGAGACTGTTT  647

seq1  GGCTTTTCGAGGAGTGCCAGCCGATGTGTGTACCTCAAATTCTGAAGCTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTCGAGGAGTGCCAGCCGATGTGTGTACCTCAAATTCTGAAGCTG  697

seq1  TTATTAATGAGTTCACTTTGGGAATAAGAAGTTGATTAGCGTTCATTAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATGAGTTCACTTTGGGAATAAGAAGTTGATTAGCGTTCATTAGT  747

seq1  TATGGGAAACAAAGGTTTCATTATGACACTTCGTAGATGTATATATAATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAAACAAAGGTTTCATTATGACACTTCGTAGATGTATATATAATG  797

seq1  CACTTTGATCATTTTCAATCTGTTTCTTTTAGTGATTTGTGTGTGTGTGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGATCATTTTCAATCTGTTTCTTTTAGTGATTTGTGTGTGTGTGT  847

seq1  TGTACATGCAGGTCAGAGGTCATCTATCTATCTATCTATCTATCTATCTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGCAGGTCAGAGGTCATCTATCTATCTATCTATCTATCTATCTA  897

seq1  TCTATCTATCTATCTATCTATCTGATTCAGAATCTCTCTAAGTAACCCTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTATCTGATTCAGAATCTCTCTAAGTAACCCTA  947

seq1  GCTGTCTGAGAATTC  958
      |||||||||||||||
seq2  GCTGTCTGAGAATTC  962