BAC Information

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BAC

Clone NameB6Ng01-007F07
Chromosome15 (Build37)
Map Location 72,208,971 - 72,326,676
singlet/doubletdoublet
Overlap genenone
Upstream gene1700010C24Rik, LOC100040847, Col22a1
Downstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007F07.bB6Ng01-007F07.g
ACCDH843932DH843933
length1,030962
definitionDH843932|Mus musculus domesticus DNA, BAC clone: B6Ng01-007F07, 5' end.DH843933|Mus musculus domesticus DNA, BAC clone: B6Ng01-007F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,208,971 - 72,209,785)(72,325,713 - 72,326,676)
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaatttgc
atttttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
actgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggtttatctctgggtcttcaattctgttccattgg
cctacttgtctgttgctataccagtaccatgcagtttttatcacaattgc
tctgtagtacatacagctttaggtcaggcatggtgattccaccagaggtt
cttttatccttgagaagagtttttgctattctaggttttttgttattcca
gatgaatctgctgtaaagtccggtcatgtggtgctgtttctcagccacat
ttcatgaactctctcatcatggcactgcctctctttcccattccttgtaa
ggacactgcacttggcctcctaaaatacccaattccaactattactcacc
ttggggtcagatcttcagcaaatgaatttctggtagatatactatttaat
ccacagcagcgaactctatttgggttccaaaattcttcattctgccatct
gaatctatgaagacaaactcagagaacatttttagatggaaactgaccca
gtggtctgggcttgcatttttggttgacct
gaattcctagaatccatgtcattcttggcataacagtgagttcaggggta
gagtggatatctcagctcatctctaattccagtcttaaaaaccagaggca
agtgatctcttaggcaagcttcctagctctggatttgattgagagactct
gcctcagtgaacaaggtggaagagggattgaggttgactcttgatatcaa
gtgctagcccctgcacacatgcaaaatgtgtataaaacacacatagatat
aggaaaatggaagaagaatttgaagattgcaaagtagtttggagaacaaa
aataacctgagcacactgttctcaggacaacctgaacatggttcctttct
gagagccaccatgtttgcagtccatgtctgtgtcctgggccattgggatt
gtctaccattcaactttgctacccagccacacctacccttacactccagc
cttagaccaggaagcacatgtatctcttagatactcaaggctcccaaaat
gattttatatactacagaaagggtggatctttgaatattttaagaagcaa
aagcaggctgggcggtggtggcacatgcttttaatcccagcactcgggag
gcagaggcaggcagatttctgagtttgaggccagcctggtctacaaagtg
agttccaggactacagagaaatcctgtctcggaaaaacaaaaacaaacat
acaacaaacaaacaaacaaaaagagcaaaagcttgctgaacagtagtggt
gcatgcttttagtttcagccctttgaaagcagaaacaggtagatttctgt
ggtttccagggcagcctggtctacggagtaaatccaagacagccagggct
acactgagaaaccctatctttgaaaaacaaacaaacaaaataaatcaaac
agcaaattttcagttcaaagtaaccactgagtaagtcatgttgtgtttga
atattcctattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72208971_72209785
seq2: B6Ng01-007F07.b_258_1074

seq1  ATCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATT  50

seq1  TTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATA  100

seq1  AGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTT  150

seq1  GACCTTAGTACAAGGAGATAGAAATGGATCAATTTGCATTTTTCTACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGTACAAGGAGATAGAAATGGATCAATTTGCATTTTTCTACATG  200

seq1  ATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATACTGTCTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATACTGTCTTTTTTC  250

seq1  CACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTG  300

seq1  TGGGTTTATCTCTGGGTCTTCAATTCTGTTCCATTGGCCTACTTGTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTATCTCTGGGTCTTCAATTCTGTTCCATTGGCCTACTTGTCTGT  350

seq1  TGCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACATA  400

seq1  CAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGA  450

seq1  GAAGAGTTTTTGCTATTCTAGGTTTTTTGTTATTCCAGATGAATCTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTTTTGCTATTCTAGGTTTTTTGTTATTCCAGATGAATCTGCTG  500

seq1  TAAAGTCCGGTCATGTGGTGCTGTTTCTCAGCCACATTTCATGAACTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCCGGTCATGTGGTGCTGTTTCTCAGCCACATTTCATGAACTCTC  550

seq1  TCATCATGGCACTGCCTCTCTTTCCCATTCCTTGTAAGGACACTGCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATGGCACTGCCTCTCTTTCCCATTCCTTGTAAGGACACTGCACTT  600

seq1  GGCCTCCTAAAATACCCAACTCCAACTA-TACTCACCTTGGGGTCAGATC  649
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  GGCCTCCTAAAATACCCAATTCCAACTATTACTCACCTTGGGGTCAGATC  650

seq1  TTCAGCAAATGAA-TTCTGGTAGATATACTATTTAATCCACAGCAGCGAA  698
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAATGAATTTCTGGTAGATATACTATTTAATCCACAGCAGCGAA  700

seq1  CTCTATTT-GGTTCCAAAATTCCTCATTCTTGCCATCTG-ATCTATGTAG  746
      |||||||| ||||||||||||| |||||| ||||||||| ||||||| ||
seq2  CTCTATTTGGGTTCCAAAATTCTTCATTC-TGCCATCTGAATCTATGAAG  749

seq1  ACAAACTCAGAGAACATTTCTAGATGAAAAACTGACACAGT-GTCTGGGC  795
      ||||||||||||||||||| ||||||  |||||||| |||| ||||||||
seq2  ACAAACTCAGAGAACATTTTTAGATG-GAAACTGACCCAGTGGTCTGGGC  798

seq1  TTGCATTTTTAGGTTGACCT  815
      |||||||||| |||||||||
seq2  TTGCATTTTT-GGTTGACCT  817

seq1: chr15_72325713_72326676
seq2: B6Ng01-007F07.g_66_1027 (reverse)

seq1  AAATAGAAATATTCAAACACAACATGACTTACTCAGT-GTTACTTTGAAC  49
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  AAATAGGAATATTCAAACACAACATGACTTACTCAGTGGTTACTTTGAAC  50

seq1  TTGAAATTTTGCTTGTTTG-TTTA-TTTGTTTGTTTGTTTTTC-AAGATA  96
       ||||| ||||| |||||| |||| |||||||||||||||||| ||||||
seq2  -TGAAAATTTGC-TGTTTGATTTATTTTGTTTGTTTGTTTTTCAAAGATA  98

seq1  GGGTTTCTCAGTGTAGCCCTGGCTGTCCTGGAATTTACTCCGTAGACCAG  146
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  GGGTTTCTCAGTGTAGCCCTGGCTGTCTTGG-ATTTACTCCGTAGACCAG  147

seq1  GCTGCCCTGGAAATCACAGAAATCTACCTGTTTCTGCCTTCCAAGGGCTG  196
      ||||||||||||| ||||||||||||||||||||||| ||| ||||||||
seq2  GCTGCCCTGGAAACCACAGAAATCTACCTGTTTCTGCTTTCAAAGGGCTG  197

seq1  AAACTAAAAGCATGCACCACTACTGTTCAGCAAGCTTTTGCTTCTTTTTG  246
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAACTAAAAGCATGCACCACTACTGTTCAGCAAGCTTTTGC-TCTTTTTG  246

seq1  TTTGTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTCCGAGACAGGATTT  296
      |||||||||||| |||| || |||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTG-TTGTATG-TTTGTTTTTGTTTTTCCGAGACAGGATTT  294

seq1  CTCTGTAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAG  344

seq1  AAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAAGCATGTGCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAAGCATGTGCCA  394

seq1  CCACCGCCCAGCCTGCTTTTGCTTCTTAAAATATTCAAAGATCCACCCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCCCAGCCTGCTTTTGCTTCTTAAAATATTCAAAGATCCACCCTT  444

seq1  TCTGTAGTATATAAAATCATTTTGGGAGCCTTGAGTATCTAAGAGATACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTATATAAAATCATTTTGGGAGCCTTGAGTATCTAAGAGATACA  494

seq1  TGTGCTTCCTGGTCTAAGGCTGGAGTGTAAGGGTAGGTGTGGCTGGGTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTCCTGGTCTAAGGCTGGAGTGTAAGGGTAGGTGTGGCTGGGTAG  544

seq1  CAAAGTTGAATGGTAGACAATCCCAATGGCCCAGGACACAGACATGGACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGAATGGTAGACAATCCCAATGGCCCAGGACACAGACATGGACT  594

seq1  GCAAACATGGTGGCTCTCAGAAAGGAACCATGTTCAGGTTGTCCTGAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATGGTGGCTCTCAGAAAGGAACCATGTTCAGGTTGTCCTGAGAA  644

seq1  CAGTGTGCTCAGGTTATTTTTGTTCTCCAAACTACTTTGCAATCTTCAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGCTCAGGTTATTTTTGTTCTCCAAACTACTTTGCAATCTTCAAA  694

seq1  TTCTTCTTCCATTTTCCTATATCTATGTGTGTTTTATACACATTTTGCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCCATTTTCCTATATCTATGTGTGTTTTATACACATTTTGCAT  744

seq1  GTGTGCAGGGGCTAGCACTTGATATCAAGAGTCAACCTCAATCCCTCTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAGGGGCTAGCACTTGATATCAAGAGTCAACCTCAATCCCTCTTC  794

seq1  CACCTTGTTCACTGAGGCAGAGTCTCTCAATCAAATCCAGAGCTAGGAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGTTCACTGAGGCAGAGTCTCTCAATCAAATCCAGAGCTAGGAAG  844

seq1  CTTGCCTAAGAGATCACTTGCCTCTGGTTTTTAAGACTGGAATTAGAGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTAAGAGATCACTTGCCTCTGGTTTTTAAGACTGGAATTAGAGAT  894

seq1  GAGCTGAGATATCCACTCTACCCCTGAACTCACTGTTATGCCAAGAATGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGATATCCACTCTACCCCTGAACTCACTGTTATGCCAAGAATGA  944

seq1  CATGGATTCTAGGAATTC  964
      ||||||||||||||||||
seq2  CATGGATTCTAGGAATTC  962