BAC Information

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BAC

Clone NameB6Ng01-007I09
Chromosome15 (Build37)
Map Location 89,605,317 - 89,605,846
singlet/doubletsinglet
Overlap genenone
Upstream geneZbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575
Downstream geneSyt10, Alg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007I09.bB6Ng01-007I09.g
ACCDH844065DH844066
length629524
definitionDH844065|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I09, 5' end.DH844066|Mus musculus domesticus DNA, BAC clone: B6Ng01-007I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgcagctcaagttggtaatttataagagttacccaggtgg
ttctggttttgaaactatgaaggggcagcagctgatgcttggtattgtga
gaggccaggagaggccattgatgaaggtgcagcctcagtggcagttaaag
gaccaaggctgaaggggccatgcagagaagttgaggcttgacacagtgaa
aagagccaatgagagcctattggtgaagcctgattgcagcagaagacccc
agcgtattagagatgccggtaccatggaatgaccaccaagaacagcagta
gcagtggagtggatagaggcagctggagtctagaagacaagctgtgtgct
gcataaggcagagctggagaagtgacccaagcccttgggaggggcccaga
cattgaatggctagagtttgattgtgactgtgccctgatatttttccctt
ttgcagtaagaaagtattttagttgagcccacagttagaattgtaaaaga
ttttgaatttcaaaagagaattggatatttgaaagggattgaaattttaa
tatgtttgaatttgtaaagactgtgggacttttaaggttatttagaatgt
ggggatgaataagaatgtaagggttgtgg
taggagattgtttttaaaaaagaaaaaggcgcataagaagacaaggagag
gaaaccagccatgtagctgaattcaggttagaatgaaagggataataaga
gctagttggagaacaagccaaagctgatggcctagtcatttgttaataaa
taattagtctcagccagagtcattatcgctggaaattaagaagtctggaa
gaaaaactcgttttacaggcaataaaataaaagatgttttcctcttggat
aaatcaacaagatgaaaagcatgcaaacctccctgacactcctttgcaaa
tgggaatcagcggggcctggctgatcaagttattgcttgtaccaactgtg
aaaccagcatcactctgtcagtgatagctgaaacccactggtgtcatata
atcagtgtctgtgtatagaaaggggcagaggactggacaaccctgatctg
accaagaaaaaaaggaaggaaggatggaaggaaggaaggaaggaaggaag
gaaggaaggaaggaaggaaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89605317_89605846
seq2: B6Ng01-007I09.g_68_597 (reverse)

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCA  50

seq1  TCCTTCCTTCCTTTTTTTCTTGGTCAGATCAGGGTTGTCCAGTCCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTTTTTTCTTGGTCAGATCAGGGTTGTCCAGTCCTCTGC  100

seq1  CCCTTTCTATACACAGACACTGATTATATGACACCAGTGGGTTTCAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTATACACAGACACTGATTATATGACACCAGTGGGTTTCAGCTA  150

seq1  TCACTGACAGAGTGATGCTGGTTTCACAGTTGGTACAAGCAATAACTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGACAGAGTGATGCTGGTTTCACAGTTGGTACAAGCAATAACTTGA  200

seq1  TCAGCCAGGCCCCGCTGATTCCCATTTGCAAAGGAGTGTCAGGGAGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGGCCCCGCTGATTCCCATTTGCAAAGGAGTGTCAGGGAGGTTT  250

seq1  GCATGCTTTTCATCTTGTTGATTTATCCAAGAGGAAAACATCTTTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTTTCATCTTGTTGATTTATCCAAGAGGAAAACATCTTTTATTT  300

seq1  TATTGCCTGTAAAACGAGTTTTTCTTCCAGACTTCTTAATTTCCAGCGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCTGTAAAACGAGTTTTTCTTCCAGACTTCTTAATTTCCAGCGAT  350

seq1  AATGACTCTGGCTGAGACTAATTATTTATTAACAAATGACTAGGCCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCTGGCTGAGACTAATTATTTATTAACAAATGACTAGGCCATCA  400

seq1  GCTTTGGCTTGTTCTCCAACTAGCTCTTATTATCCCTTTCATTCTAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGCTTGTTCTCCAACTAGCTCTTATTATCCCTTTCATTCTAACCT  450

seq1  GAATTCAGCTACATGGCTGGTTTCCTCTCCTTGTCTTCTTATGCGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTACATGGCTGGTTTCCTCTCCTTGTCTTCTTATGCGCCTTT  500

seq1  TTCTTTTTTAAAAACAATCTCCTAGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  TTCTTTTTTAAAAACAATCTCCTAGAATTC  530