BAC Information

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BAC

Clone NameB6Ng01-008M10
Chromosome15 (Build37)
Map Location 38,253,293 - 38,327,031
singlet/doubletdoublet
Overlap genenone
Upstream geneGrhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
Downstream geneAzin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L, Fzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1, LOC671215, Rims2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008M10.bB6Ng01-008M10.g
ACCDH844919DH844920
length847780
definitionDH844919|Mus musculus domesticus DNA, BAC clone: B6Ng01-008M10, 5' end.DH844920|Mus musculus domesticus DNA, BAC clone: B6Ng01-008M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,326,483 - 38,327,031)(38,253,293 - 38,254,069)
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttcttcatatatattggatattagacccc
tatccgatttgggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgttttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagatagaaatggatcaattcgca
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggagccttggcagaatttaagaccatgaagatta
ggaagttaaatgtaccatgtgggctgaaacatatcagagagatgcccgag
atgatgtgatggggcactcaaaagcacgtagggaggctgcctgacagagt
ggcacaatgtccactgcagatccagtgagcaggaaagacagcaggcagct
ctgcacccaatgtctctccaggtcagatgtaagagagggatgtaaggaaa
agttaattcaaactgtcaaggctaccccccaccccccccacccccaatta
gagaggagagccaaggtgtgggagtctgggggggggctactagctggaac
tgtgctggaagccttttctggaggggctggagggggctggagggggc
gaattcaatggcagctatcactgacaaagtttttttagggagggaggggg
gacatggagcagagccgcagacactgctaactctgaccaataagggaaga
agaagataggggcaagaaaggccttcccatgagaggactggaagagtaga
cactgaaggggctgtcttcaggggcacgtgtttatcgctgtaggaaagtg
actggcaccttcgctgggcctgtcgctgggctttcttagccctccccagg
tcgtctgcactgcttgctcagggagctgtaggtggtactgtcaatagcct
tacagaggggtgcaggtctctgtggagtgagtggttagatgggtgtgtct
aagggcaaatgaggcccgtgggagggcctctacacctgctcagcttggcc
tccaaggcaggtacctgacattttcacttgcttcatatggtaccccgcaa
agatgcccacatactttggggtgtcagatgcatgctctttagtggtgatc
accacggaatgggacgaatcaattgtgtgagtcaccagtaagcccggttt
tcagggtggagcatacctctgatttcccaactcctcattcccttggcagc
gtgagcgtgagagccgtctggctggccctccacgcccagcaactcaccgg
agagctcgaggtgggtgcacagctgctttctcagctttgctctgaaagtc
tgggaaagagttgtgacagcagacagaggacagaaaactcaaagcctggg
cctagaggtaatggtggggtagccctcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38326483_38327031
seq2: B6Ng01-008M10.b_348_895 (reverse)

seq1  GCCCCCTCCAGCCCCCTCCAGCCCCCTCCAGAAAAGGCTTCCAGCACAGT  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCCCCTCCAGCCCCCTCCAG-CCCCTCCAGAAAAGGCTTCCAGCACAGT  49

seq1  TCCAGCTAGTAGCCCCCCCCCAGACTCCCACACCTTGGCTCTCCTCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTAGTAGCCCCCCCCCAGACTCCCACACCTTGGCTCTCCTCTCTA  99

seq1  ATTGGGGGTGGGGGGGGTGGGGGGTAGCCTTGACAGTTTGAATTAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGGTGGGGGGGGTGGGGGGTAGCCTTGACAGTTTGAATTAACTTT  149

seq1  TCCTTACATCCCTCTCTTACATCTGACCTGGAGAGACATTGGGTGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATCCCTCTCTTACATCTGACCTGGAGAGACATTGGGTGCAGAG  199

seq1  CTGCCTGCTGTCTTTCCTGCTCACTGGATCTGCAGTGGACATTGTGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCTGTCTTTCCTGCTCACTGGATCTGCAGTGGACATTGTGCCAC  249

seq1  TCTGTCAGGCAGCCTCCCTACGTGCTTTTGAGTGCCCCATCACATCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGCAGCCTCCCTACGTGCTTTTGAGTGCCCCATCACATCATCT  299

seq1  CGGGCATCTCTCTGATATGTTTCAGCCCACATGGTACATTTAACTTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCATCTCTCTGATATGTTTCAGCCCACATGGTACATTTAACTTCCTA  349

seq1  ATCTTCATGGTCTTAAATTCTGCCAAGGCTCCAGTGGAAAAAAGACAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATGGTCTTAAATTCTGCCAAGGCTCCAGTGGAAAAAAGACAGCA  399

seq1  TTTTCAACAAATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACAAATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAGAATG  449

seq1  CGAATTGATCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTGATCCATTTCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGAT  499

seq1  TAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAA  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACTCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAA  548

seq1: chr15_38253293_38254069
seq2: B6Ng01-008M10.g_69_848

seq1  GAATTCAATGGCAGCTATCACTGACAAAGTTTTTTTAGGGAGGGAGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGCAGCTATCACTGACAAAGTTTTTTTAGGGAGGGAGGGGG  50

seq1  GACATGGAGCAGAGCCGCAGACACTGCTAACTCTGACCAATAAGGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAGCAGAGCCGCAGACACTGCTAACTCTGACCAATAAGGGAAGA  100

seq1  AGAAGATAGGGGCAAGAAAGGCCTTCCCATGAGAGGACTGGAAGAGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATAGGGGCAAGAAAGGCCTTCCCATGAGAGGACTGGAAGAGTAGA  150

seq1  CACTGAAGGGGCTGTCTTCAGGGGCACGTGTTTATCGCTGTAGGAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGGGGCTGTCTTCAGGGGCACGTGTTTATCGCTGTAGGAAAGTG  200

seq1  ACTGGCACCTTCGCTGGGCCTGTCGCTGGGCTTTCTTAGCCCTCCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCACCTTCGCTGGGCCTGTCGCTGGGCTTTCTTAGCCCTCCCCAGG  250

seq1  TCGTCTGCACTGCTTGCTCAGGGAGCTGTAGGTGGTACTGTCAATAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTGCACTGCTTGCTCAGGGAGCTGTAGGTGGTACTGTCAATAGCCT  300

seq1  TACAGAGGGGTGCAGGTCTCTGTGGAGTGAGTGGTTAGATGGGTGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGGGTGCAGGTCTCTGTGGAGTGAGTGGTTAGATGGGTGTGTCT  350

seq1  AAGGGCAAATGAGGCCCGTGGGAGGGCCTCTACACCTGCTCAGCTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAAATGAGGCCCGTGGGAGGGCCTCTACACCTGCTCAGCTTGGCC  400

seq1  TCCAAGGCAGGTACCTGACATTTTCACTTGCTTCATATGGTACCCCGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCAGGTACCTGACATTTTCACTTGCTTCATATGGTACCCCGCAA  450

seq1  AGATGCCCACATACTTTGGGGTGTCAGATGCATGCTCTTTAGTGGTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCACATACTTTGGGGTGTCAGATGCATGCTCTTTAGTGGTGATC  500

seq1  ACCACGGAATGGGACGAATCAATTGTGTGAGTCACCAGTAAGCCCGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGAATGGGACGAATCAATTGTGTGAGTCACCAGTAAGCCCGGTTT  550

seq1  TCAGGGTGGAGCATACCTCTGATTTCCCAACTCCTCATTCCCTTGGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGGAGCATACCTCTGATTTCCCAACTCCTCATTCCCTTGGCAGC  600

seq1  GTGAGCGTGAGAGCCGTCTGGCTGGCCCTCCACGCCCAGCAACTCACCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGTGAGAGCCGTCTGGCTGGCCCTCCACGCCCAGCAACTCACCGG  650

seq1  AGAGCTCGAGGTGGGTGCACAGCTGCTTTCTCAGC-TTGCTCTGAAAGTC  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGCTCGAGGTGGGTGCACAGCTGCTTTCTCAGCTTTGCTCTGAAAGTC  700

seq1  T-GGTAAGAGTTGTGACAGCAAGACAGAGGACAGAAAACTCAAAGCCT-G  747
      | || ||||||||||||||| ||||||||||||||||||||||||||| |
seq2  TGGGAAAGAGTTGTGACAGC-AGACAGAGGACAGAAAACTCAAAGCCTGG  749

seq1  GCCTAGGAGGTAAT-GTGGGGTAG-CCTCAAC  777
      ||||| |||||||| ||||||||| |||||||
seq2  GCCTA-GAGGTAATGGTGGGGTAGCCCTCAAC  780