MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-008N20
Chromosome	15 (Build37)
Map Location	3,977,601 - 4,122,788
singlet/doublet	doublet
Overlap gene	Oxct1
Upstream gene	LOC674207, LOC666163, EG666167, Sepp1, LOC100039139, Ghr, LOC223278, Fbxo4, AW549877, LOC100039196
Downstream gene	Plcxd3, C6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC674207 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC666163 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG666167 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666167 MGI:3643213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 8 Proteins pseudo : _no_value

name	Sepp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100039139 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ghr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14600 MGI:95708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC223278 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:223278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	Fbxo4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106052 MGI:2146220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW549877 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106064 MGI:2146232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Oxct1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67041 MGI:1914291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plcxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239318 MGI:2442605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12274 MGI:88233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039214 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 123 mRNAs, 3678 ESTs, 25 Proteins

name	4930455B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223825 MGI:1921905
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins

name	C7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109828 MGI:88235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Card6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239319 MGI:3032959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 Proteins

name	Rpl37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67281 MGI:1914531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039281 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 477 ESTs, 5 Proteins

name	Prkaa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105787 MGI:2145955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735407 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_001042613.1

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735410 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_001042614.1

name	Sepp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110735409 GeneID:20363 MGI:894288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein P, plasma, 1 transcript_id : NM_009155.3

name	LOC100039139 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266361 GeneID:100039139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG2006161 transcript_id : XM_001472338.1

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520599 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_010284.2

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520604 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_001048178.1

name	Ghr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520602 GeneID:14600 MGI:95708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth hormone receptor transcript_id : NM_001048147.1

name	Fbxo4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859770 GeneID:106052 MGI:2146220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 4 transcript_id : NM_134099.1

name	AW549877 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52630433 GeneID:106064 MGI:2146232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW549877 transcript_id : NM_145930.2

name	LOC100039196 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266363 GeneID:100039196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039196 transcript_id : XM_001472433.1

name	Oxct1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378044 GeneID:67041 MGI:1914291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-oxoacid CoA transferase 1 transcript_id : NM_024188.5

name	Plcxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340686 GeneID:239318 MGI:2442605
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-specific phospholipase C, X domain containing 3 transcript_id : NM_177355.2

name	C6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7709995 GeneID:12274 MGI:88233
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 6 transcript_id : NM_016704.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266367 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 83 mRNAs, 1867 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472369.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266369 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 102 mRNAs, 2273 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472395.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266365 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 123 mRNAs, 3676 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472352.1

name	4930455B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266371 GeneID:223825 MGI:1921905
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins product : RIKEN cDNA 4930455B06 gene transcript_id : XM_127913.7

name	C7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266373 GeneID:109828 MGI:88235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : complement component 7 transcript_id : XM_356827.6

name	Card6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398408 GeneID:239319 MGI:3032959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 Proteins product : caspase recruitment domain family, member 6 transcript_id : XM_139295.4

name	Rpl37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387412 GeneID:67281 MGI:1914531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L37 transcript_id : NM_026069.2

name	LOC100039281 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266375 GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 475 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d, transcript variant 1 transcript_id : XM_001472493.1

name	LOC100039281 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266377 GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 385 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d, transcript variant 2 transcript_id : XM_001472511.1

name	Prkaa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94681060 GeneID:105787 MGI:2145955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, AMP-activated, alpha 1 catalytic subunit transcript_id : NM_001013367.3

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110735408 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_001036078.1 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110735411 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_001036079.1 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	Sepp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74271806 CCDS:CCDS27357.1 GeneID:20363 MGI:894288
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008430 - selenium binding [Evidence IDA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0040007 - growth [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0001887 - selenium metabolism [Evidence IMP] [Evidence IDA]; GO:0019953 - sexual reproduction [Evidence IMP] codon_start : 1 product : selenoprotein P precursor protein_id : NP_033181.3 transl_except : (pos:3224848..3224850,aa:Sec) transl_except : (pos:3229342..3229344,aa:Sec) transl_except : (pos:3229396..3229398,aa:Sec) transl_except : (pos:3229519..3229521,aa:Sec) transl_except : (pos:3229555..3229557,aa:Sec) transl_except : (pos:3229621..3229623,aa:Sec) transl_except : (pos:3229663..3229665,aa:Sec) transl_except : (pos:3229669..3229671,aa:Sec) transl_except : (pos:3229690..3229692,aa:Sec) transl_except : (pos:3229696..3229698,aa:Sec)

name	LOC100039139 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266362 GeneID:100039139
definition	codon_start : 1 product : similar to hCG2006161 protein_id : XP_001472388.1

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520600 CCDS:CCDS27358.1 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 1 precursor is encoded by transcript variant 1; growth hormone receptor/binding protein product : growth hormone receptor isoform 1 precursor protein_id : NP_034414.2

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520603 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 3; growth hormone receptor/binding protein product : growth hormone receptor isoform 2 precursor protein_id : NP_001041612.1

name	Ghr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520605 GeneID:14600 MGI:95708
definition	GO_component : GO:0019898 - extrinsic to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 2; growth hormone receptor/binding protein product : growth hormone receptor isoform 2 precursor protein_id : NP_001041643.1

name	Fbxo4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859771 CCDS:CCDS27359.1 GeneID:106052 MGI:2146220
definition	GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0031398 - positive regulation of protein ubiquitination [Evidence ISS]; GO:0000209 - protein polyubiquitination [Evidence ISS]; GO:0000723 - telomere maintenance [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence ISS] codon_start : 1 exception : mismatches in translation product : F-box only protein 4 protein_id : NP_598860.1

name	AW549877 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52630434 CCDS:CCDS27360.1 GeneID:106064 MGI:2146232
definition	codon_start : 1 product : hypothetical protein LOC106064 protein_id : NP_666042.2

name	LOC100039196 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266364 GeneID:100039196
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472483.1

name	Oxct1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18266680 CCDS:CCDS27361.1 GeneID:67041 MGI:1914291
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 note : succinyl-CoA:3-ketoacid CoA transferase product : 3-oxoacid CoA transferase 1 protein_id : NP_077150.1

name	Plcxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893495 CCDS:CCDS27362.1 GeneID:239318 MGI:2442605
definition	GO_function : GO:0004629 - phospholipase C activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : phosphatidylinositol-specific phospholipase C, X domain containing 3 protein_id : NP_796329.1

name	C6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7709996 GeneID:12274 MGI:88233
definition	GO_process : GO:0006956 - complement activation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : complement component 6 protein_id : NP_057913.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266366 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472402.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266368 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472419.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266370 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472445.1

name	4930455B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266372 GeneID:223825 MGI:1921905
definition	codon_start : 1 product : hypothetical protein LOC223825 protein_id : XP_127913.6

name	C7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266374 GeneID:109828 MGI:88235
definition	codon_start : 1 product : complement component 7 protein_id : XP_356827.6

name	Card6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28481366 GeneID:239319 MGI:3032959
definition	codon_start : 1 product : hypothetical protein protein_id : XP_139295.2

name	Rpl37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385572 GeneID:67281 MGI:1914531
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : snoRNA MBII-240 product : ribosomal protein L37 protein_id : NP_080345.1

name	LOC100039281 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266376 GeneID:100039281
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472543.1

name	LOC100039281 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266378 GeneID:100039281
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472561.1

name	Prkaa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94681061 GeneID:105787 MGI:2145955
definition	EC_number : 2.7.1.- GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006695 - cholesterol biosynthesis [Evidence IEA]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0019395 - fatty acid oxidation [Evidence IMP]; GO:0006006 - glucose metabolism [Evidence IMP]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 note : AMP-activated protein kinase, alpha 1 catalytic subunit product : protein kinase, AMP-activated, alpha 1 catalytic subunit protein_id : NP_001013385.3

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 1 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 2 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 3 pseudo : _no_value

name	LOC666163 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666163
definition	number : 4 pseudo : _no_value

name	LOC223278 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:223278
definition	number : 1 pseudo : _no_value

name	LOC674207 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266359 GeneID:674207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to COX11 homolog, cytochrome c oxidase assembly protein (yeast) pseudo : _no_value transcript_id : XR_030617.1

name	EG666167 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266360 GeneID:666167 MGI:3643213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 8 Proteins product : predicted gene, EG666167 pseudo : _no_value transcript_id : XR_035649.1

clone name	MSMg01-490L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-130C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-075J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151A10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-347I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-008N20.b	B6Ng01-008N20.g
ACC	DH844975	DH844976
length	1,130	252
definition	DH844975\|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N20, 5' end.	DH844976\|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N20, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(4,121,651 - 4,122,788)	(3,977,601 - 3,977,852)
sequence	gaattctctttgggggataatgttaacttttgcttgtgagattttacatg aaaataagttttcatttttgaaataaaattttgcatttgtagagccacat actaagttacataataagttttataagaaagtgacaagatgttttttgat tgttttacacattcattttctatatcaatgggtgggttagtgtctctata ccttaaccagcatcttgttgtatatagcaatgcatggataggttagtgtt tctgtaacctcaccagcatctggctgtgacactgtctcattctatgtatc ccattagtcatatcatgtgatcttattgagttttacattacttacttttt gctttgccatatgcttgttactcttataaagaaagcaatttgaattgggt tctgagaacccacacagtggctaacaaccttctcagatccctttccagag catctaacaccttcatctgccctctgaggtcactgaatgcaagaagtgca gaccaaacactcatttacataaaataaaattaaataaatctttaaaaatt ctaactagtccttacaaatatgatgtatttaacaggtgaacttaggatac tttagtagatacattttaacataattattctccatatggactaggcaagg gagttttatacccacagataatttgatcctttgttacatggtctttacac agtagaaaaattatttctgcattaatttttggtcatatgaaatatacata gacctattctctctgagacagttaattacattgctctctgatttttctct ttctaccaacaggaatttctttcccatttatgacttagtttagttttgca aatatgttcagctctaccaccagctcagatgcccttggagtatttctgct tctctttgacattgcagatgacaatgaggtcatttcccaattgcttcgct ttctgtgaagcacagctggctctgttgctagtgcattctcgtgctgtttc ctgagtcactagaatatttcaattgacccttcagaaccgaatgtatctat gtgatctctttcacaataaaacattcatatcaaatgactacaatagccac tggagtagtgttttcctattctgggcagca	ctctccgtcccctccgggttagagacttgcaatgttcaaagaccgtaaaa aaacaaaaatcaaaaacaaaaacaaaaaaacccaaacaccttgacccaca gaatggtatcctgagtcgccctcctagcagactagctggtggtggatatt tttgcttatacattgtagagggtctagcctctaagcacacattcgggttg gatttgagtatgggaccaaggaactgagtgctggaggagggtggggagga gg
quality values	Open. Hide. 61 43 31 38 61 53 61 61 61 61 61 61 61 61 55 55 38 14 61 61 37 47 61 61 61 24 28 28 28 33 29 20 19 27 35 59 59 61 61 59 59 43 61 61 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 59 55 55 55 59 59 59 59 59 59 55 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 61 61 61 61 61 61 61 55 55 50 55 50 55 55 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 50 61 61 50 55 55 55 61 61 55 55 35 50 61 55 61 61 61 61 61 61 61 55 55 55 61 55 55 61 61 61 61 50 61 53 53 53 53 53 61 61 61 41 61 50 52 50 47 53 53 61 61 61 61 61 53 53 61 61 61 53 61 61 61 52 39 61 61 53 53 52 53 53 52 53 53 53 52 53 50 50 43 47 38 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 61 61 57 57 52 57 57 50 52 53 47 47 53 53 40 43 42 34 47 50 53 53 45 46 53 53 53 47 57 57 43 53 57 52 53 57 47 53 53 53 47 53 57 57 57 57 57 37 57 53 53 52 57 42 30 47 47 47 50 53 57 53 53 53 45 52 50 45 44 42 50 57 57 52 53 50 53 52 50 57 57 47 57 53 38 57 50 50 45 52 45 52 53 53 57 57 53 43 52 52 45 57 42 36 53 28 57 53 52 42 37 57 57 53 50 38 45 38 35 43 32 47 37 41 40 40 42 53 53 57 41 40 37 39 34 53 32 46 39 53 37 31 37 50 28 37 57 57 44 53 38 27 30 37 39 31 53 35 42 29 53 28 57 57 57 57 30 24 52 42 37 52 40 28 37 36 36 28 40 32 36 53 27 57 53 53 37 52 48 36 35 36 36 30 40 44 44 57 47 36 41 37 30 44 30 47 33 33 31 27 37 35 44 40 47 40 43 37 48 31 33 31 53 27 40 30 35 48 32 30 45 44 31 40 29 30 21 47 47 48 39 29 28 40 30 32 30 47 32 51 51 46 46 30 34 38 29 51 29 30 28 35 21 29 21 29 29 26 17 38 34 48 29 51 48 39 28 51 29 28 31 29 24 33 51 33 29 28 23 30 21 14 14 27 15 23 43 26 30 25 33 51 51 33 29 27 18 51 39 24 24 24 36 29 29 29 19 32 28 34 34 34 24 29 29 15 12 21 28 34 29 26 19 29 22 39 19 29 14 11 12 7 20 26 29 26 19 31 31 28 51 38 24 23 29 27 28 31 28 30 29 30 51 29 25 31 16 18 29 12 12 16 20 21 27 14 28 20 8 5 16 25 19 17 13 23 17 28 19 15 51 36 17 38 32 14 23 23 20 29 20 26 22 20 12 25 11 38 14 12 20 19 5 8 32 34 21 28 17 22 12 17 24 27 28 26 15 12 10 16 33 28 6 5 4 18 16 8 6 20 5 14 26 12 17 29 16 23 4 21 30 23 11 13 14 11 24 22 13 8 20 5 10 10 15 14 12 26 13 33 29 9 12 12 33 21 19 12 22 13 16 30 22 16 21 23 20 8 17 13 9 31 30 7 4 4 10 22 7 26 12 22 29 17 22 9 16 17 6 5 12 8 15 14 8 8 30 23 9 4 2 2 2 4 23 20 24 16 8 8 7 5 23 5 5 25 11 22 10 30 7 8 16 19 7 10 9 10 9 7 5 15 11 19 19 10 13 6 10 10 20 3 4 11 7 5 4 6 20 24 9 9 18 3 2 3 7 4 3 6 17 5 4 3 3 5 3	Open. Hide. 19 13 26 18 13 23 18 18 23 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 30 36 36 55 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 61 61 61 61 61 61 55 61 61 61 41 24 27

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_4121651_4122788
seq2: B6Ng01-008N20.b_47_1176 (reverse)

seq1  TGCTGGCCCAGAATAGGGAAACACATCATTCAGTGGCTATTGTAGTCATT  50
      |||| |||||||||||| |||||| |  | ||||||||||||||||||||
seq2  TGCT-GCCCAGAATAGGAAAACAC-TACTCCAGTGGCTATTGTAGTCATT  48

seq1  TGATTATGGATGTTTTATTGTTGAAAGAGATCACATAGATACATTCTGTT  100
      ||| |||| ||||||||||| ||||||||||||||||||||||||| |||
seq2  TGA-TATGAATGTTTTATTG-TGAAAGAGATCACATAGATACATTCGGTT  96

seq1  CTGAAGGGGTCAATTGAAATATTCTAGTGACTCAGGAAACAGCACCGAGA  150
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGAA-GGGTCAATTGAAATATTCTAGTGACTCAGGAAACAGCA-CGAGA  144

seq1  ATGCCACTAGCCAAACAGAGCCAGCTGTGCTTCACAG-AAGCGAAGCAAT  199
      ||| |||||||  |||||||||||||||||||||||| ||||||||||||
seq2  ATG-CACTAGC--AACAGAGCCAGCTGTGCTTCACAGAAAGCGAAGCAAT  191

seq1  TGGGAAATGACCTCATTGTCATCTGCAATGTCAAAGAGAAGCAGAAATAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATGACCTCATTGTCATCTGCAATGTCAAAGAGAAGCAGAAATAC  241

seq1  TCCAAGGGCATCTGAGCTGGTGGTAGAGCTGAACATATTTGCAAAACTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGCATCTGAGCTGGTGGTAGAGCTGAACATATTTGCAAAACTAA  291

seq1  ACTAAGTCATAAATGGGAAAGAAATTCCTGTTGGTAGAAAGAGAAAAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTCATAAATGGGAAAGAAATTCCTGTTGGTAGAAAGAGAAAAATC  341

seq1  AGAGAGCAATGTAATTAACTGTCTCAGAGAGAATAGGTCTATGTATATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAATGTAATTAACTGTCTCAGAGAGAATAGGTCTATGTATATTT  391

seq1  CATATGACCAAAAATTAATGCAGAAATAATTTTTCTACTGTGTAAAGACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGACCAAAAATTAATGCAGAAATAATTTTTCTACTGTGTAAAGACC  441

seq1  ATGTAACAAAGGATCAAATTATCTGTGGGTATAAAACTCCCTTGCCTAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACAAAGGATCAAATTATCTGTGGGTATAAAACTCCCTTGCCTAGT  491

seq1  CCATATGGAGAATAATTATGTTAAAATGTATCTACTAAAGTATCCTAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGGAGAATAATTATGTTAAAATGTATCTACTAAAGTATCCTAAGT  541

seq1  TCACCTGTTAAATACATCATATTTGTAAGGACTAGTTAGAATTTTTAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTTAAATACATCATATTTGTAAGGACTAGTTAGAATTTTTAAAG  591

seq1  ATTTATTTAATTTTATTTTATGTAAATGAGTGTTTGGTCTGCACTTCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTAATTTTATTTTATGTAAATGAGTGTTTGGTCTGCACTTCTTG  641

seq1  CATTCAGTGACCTCAGAGGGCAGATGAAGGTGTTAGATGCTCTGGAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTGACCTCAGAGGGCAGATGAAGGTGTTAGATGCTCTGGAAAGG  691

seq1  GATCTGAGAAGGTTGTTAGCCACTGTGTGGGTTCTCAGAACCCAATTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAGAAGGTTGTTAGCCACTGTGTGGGTTCTCAGAACCCAATTCAA  741

seq1  ATTGCTTTCTTTATAAGAGTAACAAGCATATGGCAAAGCAAAAAGTAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCTTTATAAGAGTAACAAGCATATGGCAAAGCAAAAAGTAAGT  791

seq1  AATGTAAAACTCAATAAGATCACATGATATGACTAATGGGATACATAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAACTCAATAAGATCACATGATATGACTAATGGGATACATAGAA  841

seq1  TGAGACAGTGTCACAGCCAGATGCTGGTGAGGTTACAGAAACACTAACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGTGTCACAGCCAGATGCTGGTGAGGTTACAGAAACACTAACCT  891

seq1  ATCCATGCATTGCTATATACAACAAGATGCTGGTTAAGGTATAGAGACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCATTGCTATATACAACAAGATGCTGGTTAAGGTATAGAGACAC  941

seq1  TAACCCACCCATTGATATAGAAAATGAATGTGTAAAACAATCAAAAAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCACCCATTGATATAGAAAATGAATGTGTAAAACAATCAAAAAACA  991

seq1  TCTTGTCACTTTCTTATAAAACTTATTATGTAACTTAGTATGTGGCTCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCACTTTCTTATAAAACTTATTATGTAACTTAGTATGTGGCTCTA  1041

seq1  CAAATGCAAAATTTTATTTCAAAAATGAAAACTTATTTTCATGTAAAATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCAAAATTTTATTTCAAAAATGAAAACTTATTTTCATGTAAAATC  1091

seq1  TCACAAGCAAAAGTTAACATTATCCCCCAAAGAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCAAAAGTTAACATTATCCCCCAAAGAGAATTC  1130

seq1: chr15_3977601_3977852
seq2: B6Ng01-008N20.g_74_325

seq1  CTCTCCGTCCCCTCCGGGTTAGAGACTTGCAATGTTCAAAGACCGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGTCCCCTCCGGGTTAGAGACTTGCAATGTTCAAAGACCGTAAAA  50

seq1  AAACAAAAATCAAAAACAAAAACAAAAAAACCCAAACACCTTGACCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATCAAAAACAAAAACAAAAAAACCCAAACACCTTGACCCACA  100

seq1  GAATGGTATCCTGAGTCGCCCTCCTAGCAGACTAGCTGGTGGTGGATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTATCCTGAGTCGCCCTCCTAGCAGACTAGCTGGTGGTGGATATT  150

seq1  TTTGCTTATACATTGTAGAGGGTCTAGCCTCTAAGCACACATTCGGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATACATTGTAGAGGGTCTAGCCTCTAAGCACACATTCGGGTTG  200

seq1  GATTTGAGTATGGGACCAAGGAACTGAGTGCTGGAGGAGGGTGGGGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGTATGGGACCAAGGAACTGAGTGCTGGAGGAGGGTGGGGAGGA  250

seq1  GG  252
      ||
seq2  GG  252

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information