BAC Information

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BAC

Clone NameB6Ng01-009P02
Chromosome4 (Build37)15 (Build37)
Map Location 70,186,159 - 70,186,1926,572,327 - 6,573,046
singlet/doubletsingletsinglet
Overlap geneMegf9
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2
Downstream geneLOC100039565, LOC100039979
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009P02.bB6Ng01-009P02.g
ACCDH845751DH845752
length7501,061
definitionDH845751|Mus musculus domesticus DNA, BAC clone: B6Ng01-009P02, 5' end.DH845752|Mus musculus domesticus DNA, BAC clone: B6Ng01-009P02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(70,186,159 - 70,186,192)(6,572,327 - 6,573,046)
sequence
gaattcttgatatatattaaatattcctcccctatctgatttaaaatagg
taaagatcctttccaaatatgttggaggcctttttgtcttattgacggtg
tcttttgacgaacagaaacattgacgttttatgaggtcccaattgttgat
tctcgatcttacagcacaagccattgctcttgtattcaggaataattccc
ctgtgcacatatcaaagaggcttttccctactttctcctatataagtttc
agtgtctctgtttttttgggctctttttttttttgcattttttaaataat
ttttttattacagattttcctcaattacatttccattgctatccccaaag
tcccccagaaccccccccccactcccctacccagcctgtcctactttttg
gccctggcgttccccaggactggggcatatagagtttgaacatccaatgg
gcctctcttgctcttggtggccaaataagccatctttggattcctaataa
actctacagaaacactcccggggtactggttaattacattgtatgttcct
ccctatagggttgttaaatcctttagctccctgggtattttcgctgccac
ctccattgggggccctgagatccaaccacacactgaacgagagcaaacac
ttaatgattatcgagattccgatgtatgctctctacaataagatatatca
gggtccgatccgcaccatcttgctagtgtatgcaaaggtgtcagcctttg

gaattcctttttgttgccaatcaagcctagctgggccatctcttccctct
aagttcctgtagaaaactgcaagtacgacgaggcacagaattccacctgg
atcttaaaatccattgtggcaagcactctaagcctgtttaccctgctcaa
ggatggggaatgtctggcagcatgcatggtggaataaagggagagggaga
aaacgggattcctctcacatttctggcgctctggtcaggtggacaatgga
ggactgccttaacatttctacttggccccaattgggtttctgcctgtggt
ataccatggaaccctgccgtccaggggagggatggtgggcaatatgctat
caagtctggcctatgactgacagaggaacacattttctttataattatac
actgctgtaaaagttgcctagttgataaaagtatttttgctgtgtgaggc
cttatcaacaatgcttgctttttgtctaggtttttaggtcttctgacagg
tgtcaggcctaaggaaaccatgagacagtccccctagtccctgtgcaaac
cttagtttctaccaacctcagaccggttcctgatggaagctgctggagac
acccactgctttttcataacggtggtttctgtaggcccttctcatgcttg
tggaattgcctggaaacccgtgcttagatagcgccacctgctggctgtcc
tttcttcttaaccttattgaatgccagcctcttctgttaactgaaccctg
agacctgggagtccttttaatgagtcattacacttatgggtggtctggga
gggctcctgaagcagaggatctattgtcaaatacatttttttttcataat
ctcaacgaaatgataactggccttcagggtttatcaactttcaaattgtt
tgagccatttgtgacgatttcattctaaaagcttgccatactcagaggct
ttgctggagctggtgtctgggggagggcttttaacagactttaaagtgct
aggatcctgggcctactatgggtgtcatatgcctccaattcaaggtgagg
cggaagcggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70186159_70186192
seq2: B6Ng01-009P02.b_761_794

seq1  ATCTTGCTAGTGTATGCAATGGTGTCAGCATTTG  34
      ||||||||||||||||||| ||||||||| ||||
seq2  ATCTTGCTAGTGTATGCAAAGGTGTCAGCCTTTG  34

seq1: chr15_6572327_6573046
seq2: B6Ng01-009P02.g_406_1127 (reverse)

seq1  CTCCGCCTCCGCCTCCACCTCG-ATTGCAGGCATATGACA-CCATAGTGG  48
      |||||| ||||||| ||||| | |||| |||||||||||| ||||||| |
seq2  CTCCGCTTCCGCCT-CACCTTGAATTGGAGGCATATGACACCCATAGTAG  49

seq1  GCCCAGGATCCTAGCACTTTTAAAGTCTGTTAAAAGCCCTCCCCCAGACA  98
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCCCAGGATCCTAGCAC-TTTAAAGTCTGTTAAAAGCCCTCCCCCAGACA  98

seq1  CCAGCTCCAGCAAAGCCTCTGAGTATGGCAAGCTTTTAGAATGAAATCGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCAGCAAAGCCTCTGAGTATGGCAAGCTTTTAGAATGAAATCGT  148

seq1  CACAAATGGCTCAAACAATCTGAAAGTTGATAAACCCTGGAGGCCAGTTA  198
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  CACAAATGGCTCAAACAATTTGAAAGTTGATAAACCCTGAAGGCCAGTTA  198

seq1  TCATTTCGTTGAGATTATG-AAAAAAAATGTATTTGACAATAGATCCTCT  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCATTTCGTTGAGATTATGAAAAAAAAATGTATTTGACAATAGATCCTCT  248

seq1  GCTTCAGGGGCCCT-CCAGACCACCCATAAGTGTAATGACTCATTAAAAG  296
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  GCTTCAGGAGCCCTCCCAGACCACCCATAAGTGTAATGACTCATTAAAAG  298

seq1  GACTCCCAGGTCTCAGGGTTCAGTTAACAGAAGAGGCTGGCATTCAATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCAGGTCTCAGGGTTCAGTTAACAGAAGAGGCTGGCATTCAATAA  348

seq1  GGTTAAGAAGAAAGGACAGCCAGCAGGTGGCGCTATCTAAGCACGGGTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAAGAAAGGACAGCCAGCAGGTGGCGCTATCTAAGCACGGGTTT  398

seq1  CCAGGCAATTCCACAAGCATGAGAAGGGCCTACAGAAACCACCGTTATGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAATTCCACAAGCATGAGAAGGGCCTACAGAAACCACCGTTATGA  448

seq1  AAAAGCAGTGGGTGTCTCCAGCAGCTTCCATCAGGAACCGGTCTGAGGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGTGGGTGTCTCCAGCAGCTTCCATCAGGAACCGGTCTGAGGTT  498

seq1  GGTAGAAACTAAGGTTTGCACAGGGACTAGGGGGACTGTCTCATGGTTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAACTAAGGTTTGCACAGGGACTAGGGGGACTGTCTCATGGTTTC  548

seq1  CTTAGGCCTGACACCTGTCAGAAGACCTAAAAACCTAGACAAAAAGCAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCCTGACACCTGTCAGAAGACCTAAAAACCTAGACAAAAAGCAAG  598

seq1  CATTGTTGATAAGGCCTCACACAGCAAAAATACTTTTATCAACTAGGCAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGATAAGGCCTCACACAGCAAAAATACTTTTATCAACTAGGCAA  648

seq1  CTTTTACAGCAGTGTATAATTATAAAGAAAATGTGTTCCTCTGTCAGTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACAGCAGTGTATAATTATAAAGAAAATGTGTTCCTCTGTCAGTCA  698

seq1  TAGGCCAGACTTGATAGCATATTG  720
      ||||||||||||||||||||||||
seq2  TAGGCCAGACTTGATAGCATATTG  722