BAC Information

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BAC

Clone NameB6Ng01-010P01
Chromosome15 (Build37)
Map Location 60,979,804 - 61,089,115
singlet/doubletdoublet
Overlap geneLOC100040323
Upstream geneLOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010P01.bB6Ng01-010P01.g
ACCDH846464DH846465
length1,006934
definitionDH846464|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P01, 5' end.DH846465|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,088,125 - 61,089,115)(60,979,804 - 60,980,646)
sequence
gaattctttatttgagaaatttatttacttattgattaaattatttgttc
tttggtgtttaagttttactgttttcgttgagatagaactgaatcaactc
cttctttttaacccctcttgtccttcccagctaatctccctcaaattctt
cccacatctctcttccttaccactccttttgttggtagcctccttttctt
taagaatttctctccaagatgccagatatggtcttacattcttagtcttt
ctatattgtttctatctgcttattatttctatcagtgtttcccttaccct
tgtgtttgatgtgatgtttacatgttgctattattttatttttttggtct
attagtgtcctcttccaaaagttgatccttatgcctacatcttgaagtat
ttctctcttataaatttaaaagctagagtcttatgataaggtctttaatt
tgaggtcgatttcatggatgcagtggggtgaaagggtgtaaatacagtac
ccatgtatgaaattctgaaaacatatacatttaaaatattaaatatcttt
atctttatccattgtttttttttgtacaagaatttagttttattcttcta
tatgtggatatcctcttctcacagtatatgttaaagagaatttatcttct
ctaatgtgtgtctttgtaaagaatcagatgactattatagtgtagctatg
tttctggatcttctggggtttttttttccgctggtgtatgtctgttgttt
tcatatgaataccatgtgtttccattgttgtcatgactggtaggttggtt
ggtttcactatggctcttgaattctctgaagttgtatactctgataattc
tggcattgctttttcccttcaagtgttttgactccatgtagtctttatgc
ttccatatgaattttaagattattttctggtttatgaaatggcaatggaa
atattaaggaatttgacagaactgtattgagttgtagtgctaataattgg
gacatt
gaattcaaaacgtgtcaatgtgctggacaaggtcagcaatttagtatatg
aggagtcacgtaagcctgagtttgtctgtcttacccaaacactttattag
tctgccagtttaggaggtcagaaggacatagcagcagaatgaacctgaac
ctaataagagaggttcccaggaggtattaatttatgaaggcatattttaa
aagtttatcagtggatttcccttatgcatgtctttctaatagtatagaag
gatccagaacttatgtaccttcattcagttgaaattatctctccccgggg
gctatcctgagcattggaaagtgtgtatttaagaattgcattgcttttct
acagattcaatgcaatccccatcaaaattccaactcaattcttcaacgaa
ttggaaggagcaatttgcaaatttgtctggaataacaaaaaacctaggat
agcaaaaagtcttcttaaggataaaagaacttctggcggaatcaccatgc
cagacctaaagctttactacagagcaattgtgataaaaactgcatggtac
tggtatagagacagacaagtagaccaatggaatagaattgaagacccaga
aatgaacccacacacctatggtcacttgatcttcgacaagggagctaaaa
ccatccagtggaagaaagacagcattttcaacaattggtgctggcacaac
tggttgttatcgtgtagaagaatgcgaatcgatccatacttatctccttg
tactaaggtcaaatctaagtggatcaaggaacttcacataaaaccagaga
cactgaaacttatagaggagaaagtggggaaaagccttgaagatatgggc
acaggggaaaaattcctgaacagaacagcaatggcttgtactgtaagatc
gagaattgacaaatgggacctaatgaaactccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61088125_61089115
seq2: B6Ng01-010P01.b_42_1024 (reverse)

seq1  AACTCAATACAGTTTCTGTCAAAATTCCCTTAAATTTTTCCATTGCCATT  50
      |||||||||||| ||||||| |||||||  | ||| |||||||||||| |
seq2  AACTCAATACAG-TTCTGTC-AAATTCC--TTAATATTTCCATTGCCA-T  45

seq1  TTCATAAACCAGAAAAATAATCTTAAAAATTCATATGGAAGCATAAAGGA  100
      |||||||||||| ||||||||||| |||||||||||||||||||||| ||
seq2  TTCATAAACCAG-AAAATAATCTT-AAAATTCATATGGAAGCATAAA-GA  92

seq1  CTACATGGAGTCAAAACACTTGAGGGGAAAAAGCAATGCCAGAATTATCA  150
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTACATGGAGTCAAAACACTTGAAGGGAAAAAGCAATGCCAGAATTATCA  142

seq1  GAGTATACAACTTCAGAGAATTCTAGAGCCATAGTGAAACCAACCAACCT  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGTATACAACTTCAGAGAATTCAAGAGCCATAGTGAAACCAACCAACCT  192

seq1  ACCAGTCATGACAACAATGGAAACACATGGTATTCATATGAAAACAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCATGACAACAATGGAAACACATGGTATTCATATGAAAACAACAG  242

seq1  ACATACACCAGCGGAAAAAAAAACCCCAGAAGATCCAGAAACATAGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACCAGCGGAAAAAAAAACCCCAGAAGATCCAGAAACATAGCTAC  292

seq1  ACTATAATAGTCATCTGATTCTTTACAAAGACACACATTAGAGAAGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATAGTCATCTGATTCTTTACAAAGACACACATTAGAGAAGATAA  342

seq1  ATTCTCTTTAACATATACTGTGAGAAGAGGATATCCACATATAGAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTTAACATATACTGTGAGAAGAGGATATCCACATATAGAAGAAT  392

seq1  AAAACTAAATTCTTGTACAAAAAAAAACAATGGATAAAGATAAAGATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAATTCTTGTACAAAAAAAAACAATGGATAAAGATAAAGATATT  442

seq1  TAATATTTTAAATGTATATGTTTTCAGAATTTCATACATGGGTACTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTAAATGTATATGTTTTCAGAATTTCATACATGGGTACTGTAT  492

seq1  TTACACCCTTTCACCCCACTGCATCCATGAAATCGACCTCAAATTAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCCTTTCACCCCACTGCATCCATGAAATCGACCTCAAATTAAAGA  542

seq1  CCTTATCATAAGACTCTAGCTTTTAAATTTATAAGAGAGAAATACTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCATAAGACTCTAGCTTTTAAATTTATAAGAGAGAAATACTTCAA  592

seq1  GATGTAGGCATAAGGATCAACTTTTGGAAGAGGACACTAATAGACCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGGCATAAGGATCAACTTTTGGAAGAGGACACTAATAGACCAAAA  642

seq1  AAATAAAATAATAGCAACATGTAAACATCACATCAAACACAAGGGTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAATAGCAACATGTAAACATCACATCAAACACAAGGGTAAGG  692

seq1  GAAACACTGATAGAAATAATAAGCAGATAGAAACAATATAGAAAGACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTGATAGAAATAATAAGCAGATAGAAACAATATAGAAAGACTAA  742

seq1  GAATGTAAGACCATATCTGGCATCTTGGAGAGAAATTCTTAAAGAAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAGACCATATCTGGCATCTTGGAGAGAAATTCTTAAAGAAAAGG  792

seq1  AGGCTACCAACAAAAGGAGTGGTAAGGAAGAGAGATGTGGGAAGAATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACCAACAAAAGGAGTGGTAAGGAAGAGAGATGTGGGAAGAATTTG  842

seq1  AGGGAGATTAGCTGGGAAGGACAAGAGGGGTTAAAAAGAAGGAGTTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGATTAGCTGGGAAGGACAAGAGGGGTTAAAAAGAAGGAGTTGATT  892

seq1  CAGTTCTATCTCAACGAAAACAGTAAAACTTAAACACCAAAGAACAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTATCTCAACGAAAACAGTAAAACTTAAACACCAAAGAACAAATA  942

seq1  ATTTAATCAATAAGTAAATAAATTTCTCAAATAAAGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCAATAAGTAAATAAATTTCTCAAATAAAGAATTC  983

seq1: chr15_60979804_60980646
seq2: B6Ng01-010P01.g_64_906

seq1  GAATTCAAAACGTGTCAATGTGCTGGACAAGGTCAGCAATTTAGTATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACGTGTCAATGTGCTGGACAAGGTCAGCAATTTAGTATATG  50

seq1  AGGAGTCACGTAAGCCTGAGTTTGTCTGTCTTACCCAAACACTTTATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCACGTAAGCCTGAGTTTGTCTGTCTTACCCAAACACTTTATTAG  100

seq1  TCTGCCAGTTTAGGAGGTCAGAAGGACATAGCAGCAGAATGAACCTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGTTTAGGAGGTCAGAAGGACATAGCAGCAGAATGAACCTGAAC  150

seq1  CTAATAAGAGAGGTTCCCAGGAGGTATTAATTTATGAAGGCATATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGAGAGGTTCCCAGGAGGTATTAATTTATGAAGGCATATTTTAA  200

seq1  AAGTTTATCAGTGGATTTCCCTTATGCATGTCTTTCTAATAGTATAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATCAGTGGATTTCCCTTATGCATGTCTTTCTAATAGTATAGAAG  250

seq1  GATCCAGAACTTATGTACCTTCATTCAGTTGAAATTATCTCTCCCCGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGAACTTATGTACCTTCATTCAGTTGAAATTATCTCTCCCCGGGG  300

seq1  GCTATCCTGAGCATTGGAAAGTGTGTATTTAAGAATTGCATTGCTTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTGAGCATTGGAAAGTGTGTATTTAAGAATTGCATTGCTTTTCT  350

seq1  ACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAA  400

seq1  TTGGAAGGAGCAATTTGCAAATTTGTCTGGAATAACAAAAAACCTAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGAGCAATTTGCAAATTTGTCTGGAATAACAAAAAACCTAGGAT  450

seq1  AGCAAAAAGTCTTCTTAAGGATAAAAGAACTTCTGGCGGAATCACCATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAGTCTTCTTAAGGATAAAAGAACTTCTGGCGGAATCACCATGC  500

seq1  CAGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTAC  550

seq1  TGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGA  600

seq1  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  650

seq1  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  700

seq1  TGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  750

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  800

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGA  843
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGA  843