BAC Information

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BAC

Clone NameB6Ng01-011D16
Chromosome15 (Build37)
Map Location 46,727,239 - 46,728,232
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039389, EG432951
Downstream geneLOC100039438, LOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011D16.bB6Ng01-011D16.g
ACCDH846670DH846671
length9901,187
definitionDH846670|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D16, 5' end.DH846671|Mus musculus domesticus DNA, BAC clone: B6Ng01-011D16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataacaaacgagatttactgtctaattttagttgaagctttgg
ctggagacatttttttttttctctaagcagttacagggctgttcctctgc
cctgtttgattttcttcaatattttcttttctgtagccaagatcttctag
gggaattcccctttcatatttgatccatatcagtttggaaggggaccaaa
gctttttcttctttcctattaacacaaatacagatgatttttctcccaaa
atagcatctcttttccccagcaacctgaaatcatcaagagtatagagtga
ttcaatttagcagcctccttttttttcaggcctgctccattttgtcctct
ctcacagagtgtttttaataccataactaaaaaacttataaccacatgca
ttttgttaaataaaacaattaaaacaatgaaagcaatctaagtaattatt
aatatccattgagacagttttcctttactatcccctaccttagccttaca
tgactaatttttgatagcaaggcctacatttttgtatttatctatgcata
cttacatgcccccattctatggagattaatatatctgtgggcatggctgt
acttgaagaggctctaccagcacctaactgagacatatgcagacacagcc
aaacattggattgagcacagtaaccactatgaaagacttaggggaagggc
tgaaggaattgaaggggattgcaacctcataggaagaacagtgtcaacta
acctggacccttcatagatcccagagaccaagccaaaaccaaggaacata
catgggctggttcattgtcctcagcatttgtgtaatggaggactgccttg
tctggcttcagtgggaaatgatgagctcaatcctctggaaacttgatgcc
ccaggaaagaggatgttagtaggggcaggtaggggagtaccctttcagag
tggggggtaagggaagatgggttgaagactgggaaggggg
gaattctcacctgaggaatactgaatggcagagaagcacccgaaaaaatg
ttcaacatccttaatgatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtagtaccggaggatccagcaatacctctgctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattaacccaaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgccactccttagaagtgggaa
caatacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcagatttatcgaaagg
actcagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggctcacagggctcccatg
gaggagctaggaaagtacccaaggagctaagggatttgcaacccttattg
gtggaataacatttatgaattatcagtacccgagcttcttgactctagct
gctaattgattcaaaagatggctagtcggccattcattggaaaagagaag
tcattggacactgctaaactttatatgcccgtcacgggcaacgtcaggct
caaaaagcgtgtaagtgtggtgtggtattggcgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_46727239_46728232
seq2: B6Ng01-011D16.b_44_1033

seq1  GAATTCCATAACAAACGAGATTTACTGTCTAATTTTAGTTGAAGCTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACAAACGAGATTTACTGTCTAATTTTAGTTGAAGCTTTGG  50

seq1  CTGGAGACATTTTTTTTTTTCTCTAAGCAGTTACAGGGCTGTTCCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACATTTTTTTTTTTCTCTAAGCAGTTACAGGGCTGTTCCTCTGC  100

seq1  CCTGTTTGATTTTCTTCAATATTTTCTTTTCTGTAGCCAAGATCTTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGATTTTCTTCAATATTTTCTTTTCTGTAGCCAAGATCTTCTAG  150

seq1  GGGAATTCCCCTTTCATATTTGATCCATATCAGTTTGGAAGGGGACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTCCCCTTTCATATTTGATCCATATCAGTTTGGAAGGGGACCAAA  200

seq1  GCTTTTTCTTCTTTCCTATTAACACAAATACAGATGATTTTTCTCCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTCTTCTTTCCTATTAACACAAATACAGATGATTTTTCTCCCAAA  250

seq1  ATAGCATCTCTTTTCCCCAGCAACCTGAAATCATCAAGAGTATAGAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATCTCTTTTCCCCAGCAACCTGAAATCATCAAGAGTATAGAGTGA  300

seq1  TTCAATTTAGCAGCCTCCTTTTTTTTCAGGCCTGCTCCATTTTGTCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTAGCAGCCTCCTTTTTTTTCAGGCCTGCTCCATTTTGTCCTCT  350

seq1  CTCACAGAGTGTTTTTAATACCATAACTAAAAAACTTATAACCACATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGTGTTTTTAATACCATAACTAAAAAACTTATAACCACATGCA  400

seq1  TTTTGTTAAATAAAACAATTAAAACAATGAAAGCAATCTAAGTAATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAATAAAACAATTAAAACAATGAAAGCAATCTAAGTAATTATT  450

seq1  AATATCCATTGAGACAGTTTTCCTTTACTATCCCCTACCTTAGCCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCATTGAGACAGTTTTCCTTTACTATCCCCTACCTTAGCCTTACA  500

seq1  TGACTAATTTTTGATAGCAAGGCCTACATTTTTGTATTTATCTATGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATTTTTGATAGCAAGGCCTACATTTTTGTATTTATCTATGCATA  550

seq1  CTTACATGCCCCCATTCTATGGAGATTAATATATCTGTGGGCATGGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATGCCCCCATTCTATGGAGATTAATATATCTGTGGGCATGGCTGT  600

seq1  ACTTGAAGAGGCTCTACCAGCACCTAACTGAGACATATGCAGACACAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGAGGCTCTACCAGCACCTAACTGAGACATATGCAGACACAGCC  650

seq1  AAACATTGGATTGAGCACAGTAACCACTATGAAAGACTTAGGGGAAGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGGATTGAGCACAGTAACCACTATGAAAGACTTAGGGGAAGGGC  700

seq1  TGAAGGAATTGAAGGGGATTGCAACCTCATAGGAAGAACAGTGTCAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAATTGAAGGGGATTGCAACCTCATAGGAAGAACAGTGTCAACTA  750

seq1  ACCTGGACCCTTCATAGATCCCAGAGACCAAGCCAAAACCAAGGAACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGACCCTTCATAGATCCCAGAGACCAAGCCAAAACCAAGGAACATA  800

seq1  CATGGGCTGGTTCATTGTCCTCAGCATTTGTGTAATGGAGGACTGCCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCTGGTTCATTGTCCTCAGCATTTGTGTAATGGAGGACTGCCTTG  850

seq1  TCTGGCTTCAGTGGGAAATGATGAGCTCAATCCTCTGGAAACTTGATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTCAGTGGGAAATGATGAGCTCAATCCTCTGGAAACTTGATGCC  900

seq1  CCAGGAAAGAAGGATGTTAGTAGGGGCAGGTAGGGGAGTACCCTTTCAGA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  CCAGGAAAG-AGGATGTTAGTAGGGGCAGGTAGGGGAGTACCCTTTCAG-  948

seq1  AGTGGGGGGTAAGGGAAGATGGGTTGAAGAACTTGGGAAGGGGG  994
      ||||||||||||||||||||||||||||||   |||||||||||
seq2  AGTGGGGGGTAAGGGAAGATGGGTTGAAGA--CTGGGAAGGGGG  990