BAC Information

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BAC

Clone NameB6Ng01-011G17
Chromosome15 (Build37)
Map Location 66,573,286 - 66,740,172
singlet/doubletdoublet
Overlap geneTg, Sla, Wisp1
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1
Downstream geneNdrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011G17.bB6Ng01-011G17.g
ACCDH846809DH846810
length3491,068
definitionDH846809|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G17, 5' end.DH846810|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,739,824 - 66,740,172)(66,573,286 - 66,574,345)
sequence
ttccctgagattattgatgttttatttatttttcctaaataaatggaaag
gaaaatttcctggtggcagggagctaagggacgagagtggtttgccgtga
gatctgcatttggaaactgtgagggtgaggtgggtatgggtggtgagcag
gaaagaaaatctctggatccatgacacaatgtctatggcatgtaagatcc
cattatggctttggagattagtgtaatcgcagtgaactgagttacctctc
aaatgacctttaagtacctgctagcagagagaggaattaggagctggtct
cctgtgcctggtcttataagggattccagcctttcgaagatggtgacat
gaattccctggagaccaatgatagaaatggattctatttaatttaagaag
aaaagacatgccttggagactgctcattaacttaaaggaaaaaaaactta
aaggaaagattaccaattagatctcaggaaagatggaacaatatcaggtt
cacaggtatagttagctagggtacatagcagcttcttcaatttgctactt
gcacttgctttagaggggctgctcatggtatactttagaagccttttatt
caggatcaaattgcccagcatagtctagaaataccccactgctggaggga
gaaagcaatagcattagtggaggcctcagaaaatacagaagtattaggag
aaagaaagcttaacctccttaggtcctgttgctggacaaacagcaaagtc
aacagttgtccactctgatcccttggtctccctgctgtgccaatttttac
cgtcagccggaatgatgttctatatgcagtgtcagggaaggaagggaaca
gcctgcgtaggtttttaagcatttaagttaggatttcaggaaaggacagc
ctgtatgggtcatgaaggcaaatggctgcattatctaagactcatttcca
ggtctgttttaggagaacaatctgaaatcaatgaagaaaggagtggatat
ttctgtatgtgcttagataaaactatactcagaatcttccctctatagga
caggctggtctttgtaagactcatagtaccccttagcttctgtcagtagg
acaagtgactgaggctcactggtcccatacactttagatactgggtgtct
atgggtattagtatagacaattgcatggaaactaagaagagactagccat
cagattgtgtctcaggagcaaattcatgaagatgtcttagaagacaaaag
tattgtctcaggaagtaacaaagaagcagagcagaggatcgatccagtgt
cttcaacttgcacataggtcacttcctttctcaattcattttctgagcga
tcctggagaagactgggacgtctttgacacttccctagaaacctagggta
ttgtaattatttgctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66739824_66740172
seq2: B6Ng01-011G17.b_50_398 (reverse)

seq1  ATGTCACCATCTTCCCTGGGCTGGAATCCCTTATAAGACCAGGCACAGGA  50
      ||||||||||||||    ||||||||||||||||||||||||||||||||
seq2  ATGTCACCATCTTCGAAAGGCTGGAATCCCTTATAAGACCAGGCACAGGA  50

seq1  GACCAGCTCCTAATTCCTCTCTCTGCTAGCAGGTACTTTAAGGTCATTTG  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GACCAGCTCCTAATTCCTCTCTCTGCTAGCAGGTACTTAAAGGTCATTTG  100

seq1  AGAGGTAACTCAGTTCACTGCGATTACACTAATCTCCAAAGCCATAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAACTCAGTTCACTGCGATTACACTAATCTCCAAAGCCATAATGG  150

seq1  GATCTTACATGCCATAGACATTGTGTCATGGATCCAGAGATTTTCTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTACATGCCATAGACATTGTGTCATGGATCCAGAGATTTTCTTTCC  200

seq1  TGCTCACCACCCATACCCACCTCACCCTCACAGTTTCCAAATGCAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACCACCCATACCCACCTCACCCTCACAGTTTCCAAATGCAGATCT  250

seq1  CACGGCAAACCACTCTCGTCCCTTAGCTCCCTGCCACCAGGAAATTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCAAACCACTCTCGTCCCTTAGCTCCCTGCCACCAGGAAATTTTCC  300

seq1  TTTCCATTTATTTAGGAAAAATAAATAAAACATCAATAATCTCAGGGAA  349
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTATTTAGGAAAAATAAATAAAACATCAATAATCTCAGGGAA  349

seq1: chr15_66573286_66574345
seq2: B6Ng01-011G17.g_66_1133

seq1  GAATTCCCTGGAGACCAATGATAGAAATGGATTCTATTTAATTTAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGAGACCAATGATAGAAATGGATTCTATTTAATTTAAGAAG  50

seq1  AAAAGACATGCCTTGGAGACTGCTCATTAACTTAAAGGAAAAAAAACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATGCCTTGGAGACTGCTCATTAACTTAAAGGAAAAAAAACTTA  100

seq1  AAGGAAAGATTACCAATTAGATCTCAGGAAAGATGGAACAATATCAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGATTACCAATTAGATCTCAGGAAAGATGGAACAATATCAGGTT  150

seq1  CACAGGTATAGTTAGCTAGGGTACATAGCAGCTTCTTCAATTTGCTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTATAGTTAGCTAGGGTACATAGCAGCTTCTTCAATTTGCTACTT  200

seq1  GCACTTGCTTTAGAGGGGCTGCTCATGGTATACTTTAGAAGCCTTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGCTTTAGAGGGGCTGCTCATGGTATACTTTAGAAGCCTTTTATT  250

seq1  CAGGATCAAATTGCCCAGCATAGTCTAGAAATACCCCACTGCTGGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAAATTGCCCAGCATAGTCTAGAAATACCCCACTGCTGGAGGGA  300

seq1  GAAAGCAATAGCATTAGTGGAGGCCTCAGAAAATACAGAAGTATTAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAATAGCATTAGTGGAGGCCTCAGAAAATACAGAAGTATTAGGAG  350

seq1  AAAGAAAGCTTAACCTCCTTAGGTCCTGTTGCTGGACAAACAGCAAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCTTAACCTCCTTAGGTCCTGTTGCTGGACAAACAGCAAAGTC  400

seq1  AACAGTTGTCCACTCTGATCCCTTGGTCTCCCTGCTGTGCCAATTTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTGTCCACTCTGATCCCTTGGTCTCCCTGCTGTGCCAATTTTTAC  450

seq1  CGTCAGCCGGAATGATGTTCTATATGCAGTGTCAGGGAAGGAAGGGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGCCGGAATGATGTTCTATATGCAGTGTCAGGGAAGGAAGGGAACA  500

seq1  GCCTGCGTAGGTTTTTAAGCATTTAAGTTAGGATTTCAGGAAAGGACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCGTAGGTTTTTAAGCATTTAAGTTAGGATTTCAGGAAAGGACAGC  550

seq1  CTGTATGGGTCATGAAGGCAAATGGCTGCATTATCTAAGACTCATTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGGTCATGAAGGCAAATGGCTGCATTATCTAAGACTCATTTCCA  600

seq1  GGTCTGTTTTAGGAGAACAATCTGAAATCAATGAAGAAAGGAGTGGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTTAGGAGAACAATCTGAAATCAATGAAGAAAGGAGTGGATAT  650

seq1  TTCTGTATGTGCTTAGATAAAACTATACTCAGAATCTTCCCTCTATAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATGTGCTTAGATAAAACTATACTCAGAATCTTCCCTCTATAGGA  700

seq1  CAGGCTGGTCTTTGTAAGACTCATAGTACCCCTTAGCTTCTGTCAGTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGTCTTTGTAAGACTCATAGTACCCCTTAGCTTCTGTCAGTAGG  750

seq1  ACAAGTGACTGAGGCTCACTGGTCCCATACAC-TTAGATACTGGGTGTCT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAAGTGACTGAGGCTCACTGGTCCCATACACTTTAGATACTGGGTGTCT  800

seq1  AT-GGTATTAGTATAGACAATTGCATGGAAACT-AGAAGAGACTAGCCAT  847
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGGGTATTAGTATAGACAATTGCATGGAAACTAAGAAGAGACTAGCCAT  850

seq1  CAGATTGTGTCTCAGGAGCAAACTCATGAAGATGTCTTAG-AGACAAAAG  896
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  CAGATTGTGTCTCAGGAGCAAATTCATGAAGATGTCTTAGAAGACAAAAG  900

seq1  TATTGTCTCAGGAAGTAACAGAGAAGCAGAGCAGAGGATCGAT-CAGTGT  945
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  TATTGTCTCAGGAAGTAACAAAGAAGCAGAGCAGAGGATCGATCCAGTGT  950

seq1  CTCCAACCTGACACATAGGTCACTTCC-TTCTCAATTCATTTTCTGAGCG  994
      || |||| || |||||||||||||||| ||||||||||||||||||||||
seq2  CTTCAACTTG-CACATAGGTCACTTCCTTTCTCAATTCATTTTCTGAGCG  999

seq1  AATCTGGAGAGTACT-GGACGTTCTTGACACTTCCCTAGAAA-CTAGGGT  1042
      |  |||||||  ||| ||||||  |||||||||||||||||| |||||||
seq2  ATCCTGGAGAAGACTGGGACGTCTTTGACACTTCCCTAGAAACCTAGGGT  1049

seq1  TATGTAATTA-TTGCTGCA  1060
        |||||||| ||||||||
seq2  ATTGTAATTATTTGCTGCA  1068