BAC Information

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BAC

Clone NameB6Ng01-011J19
Chromosome15 (Build37)
Map Location 10,992,807 - 11,037,797
singlet/doubletdoublet
Overlap geneAdamts12
Upstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3
Downstream geneTars, LOC100039772, Npr3, LOC381002, Sub1, LOC100040027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011J19.bB6Ng01-011J19.g
ACCDH846947DH846948
length1,065333
definitionDH846947|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J19, 5' end.DH846948|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,036,741 - 11,037,797)(10,992,807 - 10,993,139)
sequence
gaattcccagaaggatcatcacgttgagtctaacttcttggtagtcaagc
ttctaacagcttggtagtaaacttcttttcttcagctcatggagtaaatc
catttccaaagggtctactttgtaaaagctgagagatgggcagatggaac
acttgcttgaccattctagatggtagagtggggggaaaacgttaacatct
caggcagtatctatcttcctcacagctaggtgtctgcatcattgactgtg
agctaagtacaacaccagtacagcttgatgcagaaaaaaaaaatgggtgc
cctgacattcagaaaaacatctctgggctaatagcactgggaaaatgcag
ataaacagataacccttaaagccagtgatgaagaacatcaaccccatcct
gcaaaaaaactaatgcacctgctattcttggcaggctgtggggaatgaat
gaggtggccggacagagtcaagacacccacaagaacatgctgtttttctg
tcgtgtttggaacactggcttcagctagataagcctaaattgcttcctct
gtagctcaagaattgcctgttgctcattatacccatgccggtgtcaggct
tgtcgtgatgcatgcgatgttctagttactcacagaccaagtcaagatgt
aaaagggttatgatgtctctgcgaggaaggagtttttacaggagcacaat
gaatcaaaatgtttgattctccttcctataacttgtggacactgagagag
aaaattattttttccataaggtagtatagtaggcaaagcttcttataagt
ttcccaaattttttaccctgatttaggggcatctgctctcttattcatgg
gaactctattctgggtgataatgtgaaggaatttgtacatatctgaagtt
ccaaagcagatagccttaaaagttgtgtgcttatcagggaaggtcatgac
ctattaatgtgtatctttttttttttccaaatttttattaggtatttttc
gtctattacatttcaatcctatcccgaaggtcccctaaatccaccccccc
tgctcccctattcac
tgttgcagatcttcagaacttaagacaataaatctgtgttgttttaagac
agtaagtttgtaaatttccactagcaaaacacaggagccagtgtccctca
gaaagtcttgatagctatgtttcccagtgtggagtcctttgggctttcca
tctagggccttgcattttgggtccctggggatggtgtggctgccctgacc
caatgcaagatcacctagtagccagacatcttgctgaaggtgtgtgattg
gctgtcagccaaagagccctccatacatgaggccaaattccttctgaatg
gaataagggcggcgggggggctggggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11036741_11037797
seq2: B6Ng01-011J19.b_48_1112 (reverse)

seq1  GTGAATAGGGGAGCAGGGGGGGTG--TATAGGGGACTTTCGGGATAGGAT  48
      ||||||||||||||||||||||||  | |||||||| |||||||||||| 
seq2  GTGAATAGGGGAGCAGGGGGGGTGGATTTAGGGGACCTTCGGGATAGGA-  49

seq1  TTGAAATGTAAATGAAG-AAAATACCTAATAAAAA-TTGGAAAAAAAAAA  96
      |||||||||||  || | ||||||||||||||||| ||||||||||||||
seq2  TTGAAATGTAATAGACGAAAAATACCTAATAAAAATTTGGAAAAAAAAAA  99

seq1  GGATACACATTAATAGGTCATGACC-TCCCTGATAAGCACAC-ACTTTT-  143
       |||||||||||||||||||||||| |||||||||||||||| |||||| 
seq2  AGATACACATTAATAGGTCATGACCTTCCCTGATAAGCACACAACTTTTA  149

seq1  AGGCTATCTGCTTTGGAACTTCAGATATGTAC-AATTCCTTCACATTATC  192
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGCTATCTGCTTTGGAACTTCAGATATGTACAAATTCCTTCACATTATC  199

seq1  ACCCAGAATAGAGTTCCCATGAATAAGAGAGCAGATGCCCCTAAATCAGG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAATAGAGTTCCCATGAATAAGAGAGCAGATGCCCCTAAATCAGG  249

seq1  GTAAAAAATTTGGGAAACTTATAAGAAGC-TTGCCTACTATACTACCTTA  291
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTAAAAAATTTGGGAAACTTATAAGAAGCTTTGCCTACTATACTACCTTA  299

seq1  TGGAAAAAATAATTTTCTCTCTCAGTGTCCACAAGTTATAGGAAGGAGAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAATAATTTTCTCTCTCAGTGTCCACAAGTTATAGGAAGGAGAA  349

seq1  TCAAACATTTTGATTCATTGTGCTCCTGTAAAAACTCCTTCCTCGCAGAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATTTTGATTCATTGTGCTCCTGTAAAAACTCCTTCCTCGCAGAG  399

seq1  ACATCATAACCCTTTTACATCTTGACTTGGTCTGTGAGTAACTAGAACAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATAACCCTTTTACATCTTGACTTGGTCTGTGAGTAACTAGAACAT  449

seq1  CGCATGCATCACGACAAGCCTGACACCGGCATGGGTATAATGAGCAACAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGCATCACGACAAGCCTGACACCGGCATGGGTATAATGAGCAACAG  499

seq1  GCAATTCTTGAGCTACAGAGGAAGCAATTTAGGCTTATCTAGCTGAAGCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCTTGAGCTACAGAGGAAGCAATTTAGGCTTATCTAGCTGAAGCC  549

seq1  AGTGTTCCAAACACGACAGAAAAACAGCATGTTCTTGTGGGTGTCTTGAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCAAACACGACAGAAAAACAGCATGTTCTTGTGGGTGTCTTGAC  599

seq1  TCTGTCCGGCCACCTCATTCATTCCCCACAGCCTGCCAAGAATAGCAGGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCGGCCACCTCATTCATTCCCCACAGCCTGCCAAGAATAGCAGGT  649

seq1  GCATTAGTTTTTTTGCAGGATGGGGTTGATGTTCTTCATCACTGGCTTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTTTTTTTGCAGGATGGGGTTGATGTTCTTCATCACTGGCTTTA  699

seq1  AGGGTTATCTGTTTATCTGCATTTTCCCAGTGCTATTAGCCCAGAGATGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTATCTGTTTATCTGCATTTTCCCAGTGCTATTAGCCCAGAGATGT  749

seq1  TTTTCTGAATGTCAGGGCACCCATTTTTTTTTTCTGCATCAAGCTGTACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAATGTCAGGGCACCCATTTTTTTTTTCTGCATCAAGCTGTACT  799

seq1  GGTGTTGTACTTAGCTCACAGTCAATGATGCAGACACCTAGCTGTGAGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGTACTTAGCTCACAGTCAATGATGCAGACACCTAGCTGTGAGGA  849

seq1  AGATAGATACTGCCTGAGATGTTAACGTTTTCCCCCCACTCTACCATCTA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATACTGCCTGAGATGTTAACGTTTTCCCCCCACTCTACCATCTA  899

seq1  GAATGGTCAAGCAAGTGTTCCATCTGCCCATCTCTCAGCTTTTACAAAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTCAAGCAAGTGTTCCATCTGCCCATCTCTCAGCTTTTACAAAGT  949

seq1  AGACCCTTTGGAAATGGATTTACTCCATGAGCTGAAGAAAAGAAGTTTAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTTGGAAATGGATTTACTCCATGAGCTGAAGAAAAGAAGTTTAC  999

seq1  TACCAAGCTGTTAGAAGCTTGACTACCAAGAAGTTAGACTCAACGTGATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGCTGTTAGAAGCTTGACTACCAAGAAGTTAGACTCAACGTGATG  1049

seq1  ATCCTTCTGGGAATTC  1057
      ||||||||||||||||
seq2  ATCCTTCTGGGAATTC  1065

seq1: chr15_10992807_10993139
seq2: B6Ng01-011J19.g_72_404

seq1  TGTTGCAGATCTTCAGAACTTAAGACAATAAATCTGTGTTGTTTTAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAGATCTTCAGAACTTAAGACAATAAATCTGTGTTGTTTTAAGAC  50

seq1  AGTAAGTTTGTAAATTTCCACTAGCAAAACACAGGAGCCAGTGTCCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTTGTAAATTTCCACTAGCAAAACACAGGAGCCAGTGTCCCTCA  100

seq1  GAAAGTCTTGATAGCTATGTTTCCCAGTGTGGAGTCCTTTGGGCTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTTGATAGCTATGTTTCCCAGTGTGGAGTCCTTTGGGCTTTCCA  150

seq1  TCTAGGGCCTTGCATTTTGGGTCCCTGGGGATGGTGTGGCTGCCCTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGCCTTGCATTTTGGGTCCCTGGGGATGGTGTGGCTGCCCTGACC  200

seq1  CAATGCAAGATCACCTAGTAGCCAGACATCTTGCTGAAGGTGTGTGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAAGATCACCTAGTAGCCAGACATCTTGCTGAAGGTGTGTGATTG  250

seq1  GCTGTCAGCCAAAGAGCCCTCCATACATGAGGCCAAATTCCTTCTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGCCAAAGAGCCCTCCATACATGAGGCCAAATTCCTTCTGAATG  300

seq1  GAATAAGGGCGGCGGGGGGGCTGGGGGGTGGGG  333
      |||||||||||||||||||||||||||||||||
seq2  GAATAAGGGCGGCGGGGGGGCTGGGGGGTGGGG  333