BAC Information

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BAC

Clone NameB6Ng01-011P12
Chromosome15 (Build37)
Map Location 71,573,119 - 71,573,845
singlet/doubletsinglet
Overlap geneLOC100040847
Upstream geneLOC383051, 1700010C24Rik
Downstream geneCol22a1, Kcnk9, 1810044A24Rik, LOC665621
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011P12.bB6Ng01-011P12.g
ACCDH847198DH847199
length7271,172
definitionDH847198|Mus musculus domesticus DNA, BAC clone: B6Ng01-011P12, 5' end.DH847199|Mus musculus domesticus DNA, BAC clone: B6Ng01-011P12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtcttttttatctcagcatggagtgggaggcaaaccatccca
ttctagccatttaccctacagaaatcagaaagaagctgtatggaagagaa
gtatggttggactttggataaaggaaagaggatgttcctggcaaacagca
gaggaaatgagatatgctcagagattattattatgattgtcaatcatggt
taaccagcctccagacatagctgtaaaggacttcctggactggattaatt
gaagtaggaagacttatcccaaatatgggcagcaccattctatgggctga
ggaccaggattgaacaaaatggaggaagtgagctagggagtaacatccat
ggctctctacttcccagatgtaggcgtagtatgaatacttctttaactgt
cctacagtctttcctgccatgaaggactgcaggccaacctctagacgaaa
agaaagcctgccttttgtcagcaacaaaatagttacttagaaaagatatt
ttagcttcccctctctcctccttgccttcctctcacccctccctttattt
attattatttatttatttattatttatttatttattatggacatgattgg
atagggaacaggtcatggccctatgtctagagtagtataaaatacacagg
gggctatatctcccttctggactcttccacttacagagatatatgtagct
agaacaaatcctcttagatctttgggc
gaattcagaactcttcagctggggaacaggagtaccagtgagtacagctt
tacaaggtaagtctggtcttgaactttctaaggaaagtcaagacagtcta
tcagaagtaaagtgggaaatagctttacaaggtatgtttggccttgaact
ttttctagtgttaggagcccttttgttctttttcacatgttatcaagtga
ttaagatagggctgaaaattctagatgaaattcaggacaatctatcagaa
gtaaagcggggagagagagtaggagcaaagagaacatatggtacacaaac
taagtatacaggcctttccaagggtcttgaacccaaggaaaagtttaggt
caggtaagaatacctggggagagattagaaggaaggaaaagaaaaaagaa
aagaaaaaagatcaattagcggaggtctctaggagatactcgtcactaga
tgagctcaggaagccagctcttagtagctctgaagcagacgaagaattct
cctctgaagaaacagactgggaggaagaagcagctcattaccagccagat
aaagtgctagctaatcggtcaagaaaaaagccaaaagcggctggcgaagg
ccagcatgctgttcagcctccgggcagtcggcttcaaggtccgccctatg
cggagcccccgccctgcgtagtgcgtcagccctgcggagagagacaatgc
gcagagagacaatgcgcagagagacaatgcgcagagagacaatgcgcaga
gaggcaatgcgcagactcattcattctcagagaggaacaaaggaaaatac
aacaggcattttctggtctttgaagggagccgagggtgggcgtgtccacg
ctctggtagaatatggtgcagatttaagaacttgctcgagtcgggtctcg
taaatacggaaaccaatgctaattttacctttggtgcagttagacagggt
ttgcgggcatgggcactaacttcctgccgactggcaacgatttgtaaagc
cgctctttcctaggtattgggcaaattatatgaatgaggagctctttggg
catgaaagctgtcacagcgctagggccgagccaactgctagctgcctttg
aacttcaagacagagagaatggaactttgactgtgtaaccgcgtcaaggg
cagcttattttgtgctcgatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71573119_71573845
seq2: B6Ng01-011P12.b_47_773 (reverse)

seq1  GCCCAGAGATC-AAGA-GATTTG-TCTAGCTACATATATCTTCTGTAAGT  47
      ||||| ||||| |||| |||||| |||||||||||||||| |||||||||
seq2  GCCCAAAGATCTAAGAGGATTTGTTCTAGCTACATATATC-TCTGTAAGT  49

seq1  -GAAGAGTACAGAAAGGGAGATATAGCCCACTGTGTATTTTATACTACTC  96
       ||||||| ||| |||||||||||||||| ||||||||||||||||||||
seq2  GGAAGAGTCCAG-AAGGGAGATATAGCCCCCTGTGTATTTTATACTACTC  98

seq1  TAGACATAGGGCCATGACCTGTTCCCTATCCAAATCATGTCCATAAATAA  146
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TAGACATAGGGCCATGACCTGTTCCCTATCC-AATCATGTCCAT-AATAA  146

seq1  ATAAATAAATAAATAAATAAATAAATA--AATAAATAAAGGGAGGGGTGA  194
      |||||||||| ||||||||||||||||  |||||||||||||||||||||
seq2  ATAAATAAAT-AATAAATAAATAAATAATAATAAATAAAGGGAGGGGTGA  195

seq1  GAGGAAGGCAAGGAGGGAGAGAGGGGAAGCTAAAATATCTTTTCTAAGTA  244
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGCAAGGA-GGAGAGAGGGGAAGCTAAAATATCTTTTCTAAGTA  244

seq1  ACTATTTTGTTGCTGACAAAAGGCAGGCTTTCTTTTCGTCTAGAGGTTGG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTGTTGCTGACAAAAGGCAGGCTTTCTTTTCGTCTAGAGGTTGG  294

seq1  CCTGCAGTCCTTCATGGCAGGAAAGACTGTAGGACAGTTAAAGAAGTATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGTCCTTCATGGCAGGAAAGACTGTAGGACAGTTAAAGAAGTATT  344

seq1  CATACTACGCCTACATCTGGGAAGTAGAGAGCCATGGATGTTACTCCCTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTACGCCTACATCTGGGAAGTAGAGAGCCATGGATGTTACTCCCTA  394

seq1  GCTCACTTCCTCCATTTTGTTCAATCCTGGTCCTCAGCCCATAGAATGGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTCCTCCATTTTGTTCAATCCTGGTCCTCAGCCCATAGAATGGT  444

seq1  GCTGCCCATATTTGGGATAAGTCTTCCTACTTCAATTAATCCAGTCCAGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCATATTTGGGATAAGTCTTCCTACTTCAATTAATCCAGTCCAGG  494

seq1  AAGTCCTTTACAGCTATGTCTGGAGGCTGGTTAACCATGATTGACAATCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTTTACAGCTATGTCTGGAGGCTGGTTAACCATGATTGACAATCA  544

seq1  TAATAATAATCTCTGAGCATATCTCATTTCCTCTGCTGTTTGCCAGGAAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATCTCTGAGCATATCTCATTTCCTCTGCTGTTTGCCAGGAAC  594

seq1  ATCCTCTTTCCTTTATCCAAAGTCCAACCATACTTCTCTTCCATACAGCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTTCCTTTATCCAAAGTCCAACCATACTTCTCTTCCATACAGCT  644

seq1  TCTTTCTGATTTCTGTAGGGTAAATGGCTAGAATGGGATGGTTTGCCTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGATTTCTGTAGGGTAAATGGCTAGAATGGGATGGTTTGCCTCC  694

seq1  CACTCCATGCTGAGATAAAAAAGACTGGAATTC  727
      |||||||||||||||||||||||||||||||||
seq2  CACTCCATGCTGAGATAAAAAAGACTGGAATTC  727