BAC Information

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BAC

Clone NameB6Ng01-012F14
Chromosome15 (Build37)
Map Location 20,896,089 - 20,996,498
singlet/doubletdoublet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12, LOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012F14.bB6Ng01-012F14.g
ACCDH847467DH847468
length1,105373
definitionDH847467|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F14, 5' end.DH847468|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,995,412 - 20,996,498)(20,896,089 - 20,896,467)
sequence
gaattcatagaatagctctgaacgtcagagccagagggcttttcctcaga
ccaatgtgagttacctgtcacagtagtagcacgcatcatggtttgccaca
gttatccttagaatgtataagctcacaggagagagggagagcaaagtaga
atggccatgtgaaagcttgattcaaggcagctatgtggaatgaggagata
aagcaagagaaaagtggactccagaaagacagtaatgaaaggacaagttg
gaagagaagaactttgcatatatgaggtttatgaagccagatgtggaacc
ttaattcaaatttttgagaataacatttctatatatccaagagccttaag
gaaatgtgaaacaaaatgttggttaaatttttggtatatcataaaatata
attataactcttgaatagaattatagagaaatatttccccaaggcatgac
aagtatgcatgtaaaactaaaaatatttcattcattattgacatcttaca
taaaagcttggaaattaataggaactatgaaaactgcctttgcccctcct
cttactgggaaagtattcttttcatccattgcattttcatgacttttttt
tttatacattgactgttaaattgaacctacaataattctcaatttctgta
tcatctaattagagctagacttaatgttagggtactgacaaatgaactgc
atttacaaaaggggttatccaccaaagaagagagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagaaaa
ggagggtcacttgagataccattttctaaaaaaagactgaataaattttc
ataatttttacctataaaattcaaatatctctgtgtaaatttaaccaact
gaatgcaaaatgagatggttatgcactatattgctcaagataagacaaaa
tataatggaagaaatttatcttattggttatgaaatactagaaaatactc
accaacttaaactgaggaaatttattacgatactttctactgaaaagggt
ggtagaacagtatcctctcgttccctaagtctggcattcattaaatgttc
actaa
catactaagagaatgctgtgctatgaagccacatgaatccacgtgagatt
aaaattatgtatagtaatcatactgtctaattgttatgaaatataatggg
gtgagggggtacttagtgggcccatgccaaggaatgctcctgagtaataa
atgccatgcgacacctctagcataaaagaggtttattgaggcaaggaaga
ggagtgaggacctgaagaaggggtgaagacagatgaatgaacatgtaaac
aggcagacagatgggagcagagccatgagggcagagaaggaggttgggac
agcaaaagatatatagaggaaaagagagaactttggaatagagagagagg
ggcgaagagggagagggagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20995412_20996498
seq2: B6Ng01-012F14.b_50_1154 (reverse)

seq1  ---------------------------TTAGTGAACAGAGA-GATACTGT  22
                                 |||| |||| |||| ||||||||
seq2  TTAGTGAACATTTAATGAATGCCAGACTTAGGGAAC-GAGAGGATACTGT  49

seq1  TCCTACCACACATTTTTCATGTAGAAAGTATCTGTTAAATAAATTTTCTC  72
      | ||||||| |  |||||| |||||||||||| ||  ||||||||| |||
seq2  T-CTACCACCC--TTTTCA-GTAGAAAGTATC-GT--AATAAATTTCCTC  92

seq1  ATGTTTTAAGTCGGTGAGTATTTTTCTTGTATTTTCATAACC-ATAAGAT  121
      |   ||||||| |||||||| |||||| ||| |||||||||| |||||||
seq2  A--GTTTAAGTTGGTGAGTA-TTTTCTAGTA-TTTCATAACCAATAAGAT  138

seq1  AAATTTTCTTCATTATATTTTGTCTTATCTTGAGCAATATAGTGCATAGC  171
      ||||||  | |||||||||||||||||||||||||||||||||||||| |
seq2  AAATTTCTTCCATTATATTTTGTCTTATCTTGAGCAATATAGTGCATAAC  188

seq1  CATCTCATTTTGCATTCAGTTGTTAAAATTTACACAGAGATATTTGGATT  221
      |||||||||||||||||||||| | ||||||||||||||||||||| |||
seq2  CATCTCATTTTGCATTCAGTTGGTTAAATTTACACAGAGATATTTGAATT  238

seq1  TTATAGGTAAAAATTATGAAAATTTATTCAGTCTTTTTTTTAGAAAATGG  271
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATAGGTAAAAATTATGAAAATTTATTCAGTC-TTTTTTTAGAAAATGG  287

seq1  TATCTCAAGTGACCCTCCTTT--TCTCTCTCTCTCTCTCTCTCTCTCTCT  319
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TATCTCAAGTGACCCTCCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  337

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTGGTGG  369
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTGGTGG  387

seq1  ATAACCCCTTTTGTAAATGCAGTTCATTTGTCAGTACCCTAACATTAAGT  419
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCTTTTGTAAATGCAGTTCATTTGTCAGTACCCTAACATTAAGT  437

seq1  CTAGCTCTAATTAGATGATACAGAAATTGAGAATTATTGTAGGTTCAATT  469
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCTAATTAGATGATACAGAAATTGAGAATTATTGTAGGTTCAATT  487

seq1  TAACAGTCAATGTATAAAAAAAAAAGTCATGAAAATGCAATGGATGAAAA  519
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCAATGTATAAAAAAAAAAGTCATGAAAATGCAATGGATGAAAA  537

seq1  GAATACTTTCCCAGTAAGAGGAGGGGCAAAGGCAGTTTTCATAGTTCCTA  569
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTTTCCCAGTAAGAGGAGGGGCAAAGGCAGTTTTCATAGTTCCTA  587

seq1  TTAATTTCCAAGCTTTTATGTAAGATGTCAATAATGAATGAAATATTTTT  619
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCCAAGCTTTTATGTAAGATGTCAATAATGAATGAAATATTTTT  637

seq1  AGTTTTACATGCATACTTGTCATGCCTTGGGGAAATATTTCTCTATAATT  669
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACATGCATACTTGTCATGCCTTGGGGAAATATTTCTCTATAATT  687

seq1  CTATTCAAGAGTTATAATTATATTTTATGATATACCAAAAATTTAACCAA  719
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAAGAGTTATAATTATATTTTATGATATACCAAAAATTTAACCAA  737

seq1  CATTTTGTTTCACATTTCCTTAAGGCTCTTGGATATATAGAAATGTTATT  769
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTTCACATTTCCTTAAGGCTCTTGGATATATAGAAATGTTATT  787

seq1  CTCAAAAATTTGAATTAAGGTTCCACATCTGGCTTCATAAACCTCATATA  819
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAATTTGAATTAAGGTTCCACATCTGGCTTCATAAACCTCATATA  837

seq1  TGCAAAGTTCTTCTCTTCCAACTTGTCCTTTCATTACTGTCTTTCTGGAG  869
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTTCTTCTCTTCCAACTTGTCCTTTCATTACTGTCTTTCTGGAG  887

seq1  TCCACTTTTCTCTTGCTTTATCTCCTCATTCCACATAGCTGCCTTGAATC  919
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTTCTCTTGCTTTATCTCCTCATTCCACATAGCTGCCTTGAATC  937

seq1  AAGCTTTCACATGGCCATTCTACTTTGCTCTCCCTCTCTCCTGTGAGCTT  969
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCACATGGCCATTCTACTTTGCTCTCCCTCTCTCCTGTGAGCTT  987

seq1  ATACATTCTAAGGATAACTGTGGCAAACCATGATGCGTGCTACTACTGTG  1019
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCTAAGGATAACTGTGGCAAACCATGATGCGTGCTACTACTGTG  1037

seq1  ACAGGTAACTCACATTGGTCTGAGGAAAAGCCCTCTGGCTCTGACGTTCA  1069
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAACTCACATTGGTCTGAGGAAAAGCCCTCTGGCTCTGACGTTCA  1087

seq1  GAGCTATTCTATGAATTC  1087
      ||||||||||||||||||
seq2  GAGCTATTCTATGAATTC  1105

seq1: chr15_20896089_20896467
seq2: B6Ng01-012F14.g_68_446

seq1  GAATTCCATACTAAGAGAATGCTGTGCTATGAAGCCACATGAATCCACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACTAAGAGAATGCTGTGCTATGAAGCCACATGAATCCACGT  50

seq1  GAGATTAAAATTATGTATAGTAATCATACTGTCTAATTGTTATGAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAAAATTATGTATAGTAATCATACTGTCTAATTGTTATGAAATAT  100

seq1  AATGGGGTGAGGGGGTACTTAGTGGGCCCATGCCAAGGAATGCTCCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTGAGGGGGTACTTAGTGGGCCCATGCCAAGGAATGCTCCTGAG  150

seq1  TAATAAATGCCATGCGACACCTCTAGCATAAAAGAGGTTTATTGAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATGCCATGCGACACCTCTAGCATAAAAGAGGTTTATTGAGGCAA  200

seq1  GGAAGAGGAGTGAGGACCTGAAGAAGGGGTGAAGACAGATGAATGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGAGTGAGGACCTGAAGAAGGGGTGAAGACAGATGAATGAACAT  250

seq1  GTAAACAGGCAGACAGATGGGAGCAGAGCCATGAGGGCAGAGAAGGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGGCAGACAGATGGGAGCAGAGCCATGAGGGCAGAGAAGGAGGT  300

seq1  TGGGACAGCAAAAGATATATAGAGGAAAAGAGAGAACTTTGGAATAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGCAAAAGATATATAGAGGAAAAGAGAGAACTTTGGAATAGAGA  350

seq1  GAGAGGGGCGAAGAGGGAGAGGGAGAAGG  379
      |||||||||||||||||||||||||||||
seq2  GAGAGGGGCGAAGAGGGAGAGGGAGAAGG  379