BAC Information

Click to search

BAC

Clone NameB6Ng01-012I07
Chromosome15 (Build37)
Map Location 21,982,748 - 22,135,880
singlet/doubletdoublet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012I07.bB6Ng01-012I07.g
ACCDH847589DH847590
length1,1051,009
definitionDH847589|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I07, 5' end.DH847590|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,134,876 - 22,135,880)(21,982,748 - 21,983,738)
sequence
gaattctctgtttagttctgtgccccatgttttaattaggttatttggat
tgttggagactaccttcttgagttctttatatattttgtatattagcagt
gtatcaaatataggtttagtgaagatccctccccaatctgtaggctgctg
ttttgttgtattgacagtgtccttttccttactggagcttttctgtttca
caaagttacaatttatcaattggtgatcttagagcctgagccactggtgt
tctgttcaggaaattgttgcctgtaccaatgagtctctatatctgctccc
aaaaggtgctcaatgaatcctcttagattacaattggactgatacacact
gatctgagtatagtagaacatcattaagaatcatttcattgattttttgt
ttgattttttaatttttaatatttatttatttatttatttatttatttat
ttattaccagtcttatttgcttctttcataggtctctgattcctggctat
ccaggcactgtaaggcagtgtatgatggtacatgatcccctgcacctgta
gcaccagggtatatcatgatatatttcaggcagtgtaagcatccacacac
acacagtttaacacacacacacacacacacacacacacacacacacacag
aaatctttaaagaaaaattacagtatgttgactggatgacatgtctattg
gtgagaggatggtattgatgtcttctactctcactgtttgagggtcaata
tgcaatttaagctgtaatagtggttattttataaacttgagtatccttgt
gtttggggcataggtggtaagaactgaaatgtcatcttggtagatttttc
ctttgatgagtatatagttttctttccaaactcttttgattagttttagt
ttgaagtctattttggtgggtattattatggctatatcagctggtttttt
aggtccatttgcttgaaaaatttttatcagcccttttctcccagttaatg
gctatctttgatactgagttatgtttgcacatgcacaagaaaggtgatcc
gtctttgctttgtattgctttattattattattataataattatttataa
cacaa
gaattccatagcactctgtcttctgcttgtcatatatcaaaccactgtta
gttcaacatgacatagacactctggaatttaaaaaggcaatttattaaga
acttcacacctaaaagtcaaataattggccactaattttttttcctacca
tgactgttaccaaatgactaaaaaatggaggaacaggacagaaaggaggt
gagagatgcttggaagccctcataaccatagccgtggaaggccaagtgaa
ggagagctggcgacgctggacaagttgtcataatgaggaatgtacaaaga
taggtaaactaattaaagcccaaccactgtaattaatcacccaaactgag
aagtggtacaggaataagagcctcttaaaaaatttcacgtcaatccttgt
cacagttttgaaaatataatgcataaaaccagcctgaatgttcaacctta
ggtgtaggaacctttactgaagagttctaaagagatggaataagctttct
ttttattgaaaatagattcttttctcactcttctctcatagaatacctcc
caaccatagtttatcctacccatccccaagctcctcacttccaacccact
ccccttccatttctcttcagaaaagaacagacttccaagagaccaccaca
gaatagaacaacaacaacacaatgatataataagacaaagcaaacccgct
cttactgaggctagacagggcacccaaaagaaggaaaatattcccaaggg
cagacaaaatagagatacacttgatctcactgttaggagttccacaaaaa
tcccaagctaacaaccataacaaataagaggagggccttctggagaagcc
tgcctgccccatgcttgctgctattgtctctgcaagccaatgtgagccat
gcttagttgattcagtgggccatgttctcatgggtgtcctcattctctca
gactcagataacctttctctgtctcgtctatggggttctatctgcaggtg
gagggactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22134876_22135880
seq2: B6Ng01-012I07.b_151_1145 (reverse)

seq1  TTGTGTTATAAATAAATTTAATTAATAATAATAATAATAAAAGCAGATAC  50
      |||||||||||||||  |||  | |||||||||||||| |||||| ||||
seq2  TTGTGTTATAAATAA--TTA--TTATAATAATAATAAT-AAAGCA-ATAC  44

seq1  AAAAGCAAAGACAGAATCCACCCTTCTGGTGCATTGTGCAAACATAACTC  100
       ||||||||||| ||   |||| |||| ||||| ||||||||||||||||
seq2  -AAAGCAAAGACGGA--TCACCTTTCTTGTGCA-TGTGCAAACATAACTC  90

seq1  AGTATCAAAGATAGCCATTAACTGGGAGAAAAGGGCTGATAAAAATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAAAGATAGCCATTAACTGGGAGAAAAGGGCTGATAAAAATTTTT  140

seq1  CAAGCAAATGGACCTAAAAAACCAGCTGATATAGCCATAATAATACCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAATGGACCTAAAAAACCAGCTGATATAGCCATAATAATACCCAC  190

seq1  CAAAATAGACTTCAAACTAAAACTAATCAAAAGAGTTTGGAAAGAAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGACTTCAAACTAAAACTAATCAAAAGAGTTTGGAAAGAAAACT  240

seq1  ATATACTCATCAAAGGAAAAATCTACCAAGATGACATTTCAGTTCTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTCATCAAAGGAAAAATCTACCAAGATGACATTTCAGTTCTTACC  290

seq1  ACCTATGCCCCAAACACAAGGATACTCAAGTTTATAAAATAACCACTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGCCCCAAACACAAGGATACTCAAGTTTATAAAATAACCACTATT  340

seq1  ACAGCTTAAATTGCATATTGACCCTCAAACAGTGAGAGTAGAAGACATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTAAATTGCATATTGACCCTCAAACAGTGAGAGTAGAAGACATCA  390

seq1  ATACCATCCTCTCACCAATAGACATGTCATCCAGTCAACATACTGTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATCCTCTCACCAATAGACATGTCATCCAGTCAACATACTGTAATT  440

seq1  TTTCTTTAAAGATTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAAGATTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  490

seq1  TGTGTTAAACTGTGTGTGTGTGGATGCTTACACTGCCTGAAATATATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAACTGTGTGTGTGTGGATGCTTACACTGCCTGAAATATATCAT  540

seq1  GATATACCCTGGTGCTACAGGTGCAGGGGATCATGTACCATCATACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCCTGGTGCTACAGGTGCAGGGGATCATGTACCATCATACACTG  590

seq1  CCTTACAGTGCCTGGATAGCCAGGAATCAGAGACCTATGAAAGAAGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACAGTGCCTGGATAGCCAGGAATCAGAGACCTATGAAAGAAGCAAA  640

seq1  TAAGACTGGTAATAAATAAATAAATAAATAAATAAATAAATAAATATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGGTAATAAATAAATAAATAAATAAATAAATAAATAAATATTAA  690

seq1  AAATTAAAAAATCAAACAAAAAATCAATGAAATGATTCTTAATGATGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAAATCAAACAAAAAATCAATGAAATGATTCTTAATGATGTTC  740

seq1  TACTATACTCAGATCAGTGTGTATCAGTCCAATTGTAATCTAAGAGGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATACTCAGATCAGTGTGTATCAGTCCAATTGTAATCTAAGAGGATT  790

seq1  CATTGAGCACCTTTTGGGAGCAGATATAGAGACTCATTGGTACAGGCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCACCTTTTGGGAGCAGATATAGAGACTCATTGGTACAGGCAAC  840

seq1  AATTTCCTGAACAGAACACCAGTGGCTCAGGCTCTAAGATCACCAATTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTGAACAGAACACCAGTGGCTCAGGCTCTAAGATCACCAATTGA  890

seq1  TAAATTGTAACTTTGTGAAACAGAAAAGCTCCAGTAAGGAAAAGGACACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTAACTTTGTGAAACAGAAAAGCTCCAGTAAGGAAAAGGACACT  940

seq1  GTCAATACAACAAAACAGCAGCCTACAGATTGGGGAGGGATCTTCACTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATACAACAAAACAGCAGCCTACAGATTGGGGAGGGATCTTCACTAA  990

seq1  ACCTA  1005
      |||||
seq2  ACCTA  995

seq1: chr15_21982748_21983738
seq2: B6Ng01-012I07.g_67_1053

seq1  GAATTCCATAGCACTCTGTCTTCTGCTTGTCATATATCAAACCACTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGCACTCTGTCTTCTGCTTGTCATATATCAAACCACTGTTA  50

seq1  GTTCAACATGACATAGACACTCTGGAATTTAAAAAGGCAATTTATTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATGACATAGACACTCTGGAATTTAAAAAGGCAATTTATTAAGA  100

seq1  ACTTCACACCTAAAAGTCAAATAATTGGCCACTAATTTTTTTTCCTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACACCTAAAAGTCAAATAATTGGCCACTAATTTTTTTTCCTACCA  150

seq1  TGACTGTTACCAAATGACTAAAAAATGGAGGAACAGGACAGAAAGGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTACCAAATGACTAAAAAATGGAGGAACAGGACAGAAAGGAGGT  200

seq1  GAGAGATGCTTGGAAGCCCTCATAACCATAGCCGTGGAAGGCCAAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGCTTGGAAGCCCTCATAACCATAGCCGTGGAAGGCCAAGTGAA  250

seq1  GGAGAGCTGGCGACGCTGGACAAGTTGTCATAATGAGGAATGTACAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTGGCGACGCTGGACAAGTTGTCATAATGAGGAATGTACAAAGA  300

seq1  TAGGTAAACTAATTAAAGCCCAACCACTGTAATTAATCACCCAAACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAACTAATTAAAGCCCAACCACTGTAATTAATCACCCAAACTGAG  350

seq1  AAGTGGTACAGGAATAAGAGCCTCTTAAAAAATTTCACGTCAATCCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTACAGGAATAAGAGCCTCTTAAAAAATTTCACGTCAATCCTTGT  400

seq1  CACAGTTTTGAAAATATAATGCATAAAACCAGCCTGAATGTTCAACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTTGAAAATATAATGCATAAAACCAGCCTGAATGTTCAACCTTA  450

seq1  GGTGTAGGAACCTTTACTGAAGAGTTCTAAAGAGATGGAATAAGCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGGAACCTTTACTGAAGAGTTCTAAAGAGATGGAATAAGCTTTCT  500

seq1  TTTTATTGAAAATAGATTCTTTTCTCACTCTTCTCTCATAGAATACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAAAATAGATTCTTTTCTCACTCTTCTCTCATAGAATACCTCC  550

seq1  CAACCATAGTTTATCCTACCCATCCCCAAGCTCCTCACTTCCAACCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATAGTTTATCCTACCCATCCCCAAGCTCCTCACTTCCAACCCACT  600

seq1  CCCCTTCCATTTCTCTTCAGAAAAGAACAGACTTCCAAGAGACCACCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCATTTCTCTTCAGAAAAGAACAGACTTCCAAGAGACCACCACA  650

seq1  GAATAGAACAACAACAACACAATGATATAATAAGACAAAGCAAACCCGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAACAACAACAACACAATGATATAATAAGACAAAGCAAACCCGCT  700

seq1  CTTACTGAGGCTAGACAGGGCACCCAAAAGAAGGAAAATATTCCCAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGAGGCTAGACAGGGCACCCAAAAGAAGGAAAATATTCCCAAGGG  750

seq1  CAGACAAAATAGAGATACACTTGATCTCACTGTTAGGAGTTCCACAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAATAGAGATACACTTGATCTCACTGTTAGGAGTTCCACAAAAA  800

seq1  TCCCAAGCTAACAACCATAACAAATAAGAGGAGGGCCTTCTGGAGAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTAACAACCATAACAAATAAGAGGAGGGCCTTCTGGAGAAGCC  850

seq1  TGCCTGCCCCATGCTTGCTGCTATTGTCTCTGCAAGCCAATGTGAGCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCCCATGCTTGCTGCTATTGTCTCTGCAAGCCAATGTGAGCCAT  900

seq1  GCTTAGTTGATTCAGTGGGCCATGTTCTCATGGGTGTCCTCCATTCTCTC  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTTAGTTGATTCAGTGGGCCATGTTCTCATGGGTGTCCT-CATTCTCTC  949

seq1  AGACTCAGATAACCTTTTTCTCTGTCTCCTTCTATGGGGTT  991
      ||||||||||||||  ||||||||||| | |||||||||||
seq2  AGACTCAGATAACC--TTTCTCTGTCT-CGTCTATGGGGTT  987