BAC Information

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BAC

Clone NameB6Ng01-012I24
Chromosome15 (Build37)
Map Location 63,009,312 - 63,147,398
singlet/doubletdoublet
Overlap genenone
Upstream genePvt1, LOC100040584, H2afy3, LOC100040430, Tsg101-ps
Downstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012I24.bB6Ng01-012I24.g
ACCDH847623DH847624
length316786
definitionDH847623|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I24, 5' end.DH847624|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,147,083 - 63,147,398)(63,009,312 - 63,009,836)
sequence
acttggaatcctttgtctcataatatctgcaattgggcaacatgataatg
tcttccctttccttgcttacctgttcactagattttgaggtagggcctgg
tatactctaaatgcctgtataaaaaataaaataaaatataaaataaaata
aaataaaatagaacaaaataaaataaaataaaataaaataaaggaaagta
tgcttttagaagtggaatgtccctccctccctatttgtgattgcctggga
gggaaaatggatggggtgggggagttgggggaaccccataaagaattggg
tgagggaaaaggactg
gaattccttgctggcttgcagactctttgctattgaagaatagtcttagt
ctatggtgatctgataggatgtgtgagattatttcaaccttcttgtatct
gttgaggcctcttttgtgactgattatatggtcaattttggagtaccatg
aggtgctgagaagaaggtatattcttttgctttaggatggaatgttctat
atttgttagatccatttgattcataacttctcttagttcattgtgtcttg
gtttagtttgtgtttccatgatctgtccattgatgagagtggggtgttga
agtgtcccactattattgtgtgagatgcaatgtgtgctttgagctttact
aaagtttcttttatggatgtgggtgcccttgcatttggagcatagatgtt
cagaattgagagttcatattggtagattatttttcctttgatgagtatga
agtatccgttcttatcctttttgataacttttggttgcaagtcgatttta
tttgatattagaatggctactccagcttgtttcttgggatcatttgcttg
gaaatttgttttccagccttttactgtgaggtagtgtttgctttgacact
caggtgtgttttctgtatgcatcaaaatgctgggtcctgttatatatcca
gtctgttagtctatgtctttttattggggaattgagttcattaatgttaa
gagatatttaaggaatagtggttgttgctgccctgttattttttgatgtt
atttttatgtttgtgtgtacccttcttttggggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63147083_63147398
seq2: B6Ng01-012I24.b_53_368 (reverse)

seq1  CAGTCCTTTTCCCTCACCCAATACTATATCTGGTTCCCCCAACTCCCCCA  50
      |||||||||||||||||||||| || |||  |||||||||||||||||||
seq2  CAGTCCTTTTCCCTCACCCAATTCTTTATGGGGTTCCCCCAACTCCCCCA  50

seq1  CCCCATCCATTTTCCCTCCCAGGCAATCACAAATAGGGAGGGAGGGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCATTTTCCCTCCCAGGCAATCACAAATAGGGAGGGAGGGACAT  100

seq1  TCCACTTCTAAAAGCATACTTTCCTTTATTTTATTTTATTTTATTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTAAAAGCATACTTTCCTTTATTTTATTTTATTTTATTTTATT  150

seq1  TTGTTCTATTTTATTTTATTTTATTTTATATTTTATTTTATTTTTTATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTATTTTATTTTATTTTATTTTATATTTTATTTTATTTTTTATAC  200

seq1  AGGCATTTAGAGTATACCAGGCCCTACCTCAAAATCTAGTGAACAGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTAGAGTATACCAGGCCCTACCTCAAAATCTAGTGAACAGGTAA  250

seq1  GCAAGGAAAGGGAAGACATTATCATGTTGCCCAATTGCAGATATTATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAAAGGGAAGACATTATCATGTTGCCCAATTGCAGATATTATGAG  300

seq1  ACAAAGGATTCCAAGT  316
      ||||||||||||||||
seq2  ACAAAGGATTCCAAGT  316

seq1: chr15_63009312_63009836
seq2: B6Ng01-012I24.g_66_590

seq1  GAATTCCTTGCTGGCTTGCAGACTCTTTGCTATTGAAGAATAGTCTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTGGCTTGCAGACTCTTTGCTATTGAAGAATAGTCTTAGT  50

seq1  CTATGGTGATCTGATAGGATGTGTGAGATTATTTCAACCTTCTTGTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGATCTGATAGGATGTGTGAGATTATTTCAACCTTCTTGTATCT  100

seq1  GTTGAGGCCTCTTTTGTGACTGATTATATGGTCAATTTTGGAGTACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCCTCTTTTGTGACTGATTATATGGTCAATTTTGGAGTACCATG  150

seq1  AGGTGCTGAGAAGAAGGTATATTCTTTTGCTTTAGGATGGAATGTTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTGAGAAGAAGGTATATTCTTTTGCTTTAGGATGGAATGTTCTAT  200

seq1  ATTTGTTAGATCCATTTGATTCATAACTTCTCTTAGTTCATTGTGTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAGATCCATTTGATTCATAACTTCTCTTAGTTCATTGTGTCTTG  250

seq1  GTTTAGTTTGTGTTTCCATGATCTGTCCATTGATGAGAGTGGGGTGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTTTGTGTTTCCATGATCTGTCCATTGATGAGAGTGGGGTGTTGA  300

seq1  AGTGTCCCACTATTATTGTGTGAGATGCAATGTGTGCTTTGAGCTTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCACTATTATTGTGTGAGATGCAATGTGTGCTTTGAGCTTTACT  350

seq1  AAAGTTTCTTTTATGGATGTGGGTGCCCTTGCATTTGGAGCATAGATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTTTTATGGATGTGGGTGCCCTTGCATTTGGAGCATAGATGTT  400

seq1  CAGAATTGAGAGTTCATATTGGTAGATTATTTTTCCTTTGATGAGTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGAGAGTTCATATTGGTAGATTATTTTTCCTTTGATGAGTATGA  450

seq1  AGTATCCGTTCTTATCCTTTTTGATAACTTTTGGTTGCAAGTCGATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCGTTCTTATCCTTTTTGATAACTTTTGGTTGCAAGTCGATTTTA  500

seq1  TTTGATATTAGAATGGCTACTCCAG  525
      |||||||||||||||||||||||||
seq2  TTTGATATTAGAATGGCTACTCCAG  525