BAC Information

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BAC

Clone NameB6Ng01-013B19
Chromosome15 (Build37)
Map Location 30,882,094 - 30,883,187
singlet/doubletsinglet
Overlap geneCtnnd2
Upstream geneLOC382975
Downstream gene9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013B19.bB6Ng01-013B19.g
ACCDH848012DH848013
length1,2371,083
definitionDH848012|Mus musculus domesticus DNA, BAC clone: B6Ng01-013B19, 5' end.DH848013|Mus musculus domesticus DNA, BAC clone: B6Ng01-013B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggagaattcccagataaatcagtgaactagaaaaggcaggtc
tgttctcatccaaaggcagcaggcaccatcttagccaagggcctagagag
cataacacagagaaagggcaaaatccctccctcttctgatgctgggtcac
ccatccttctctgccctgggtattatagctccaggttctttatccgctgg
ctcctgaaacttgtatttctaagctctaaggtcttcagccttgggctaag
gtttacaccattagcttctctgtttccgaggtcctgaacttggtcagagt
tgaaccatagtttttctcaggtctctaggttgtaaacagtatgcgggggt
attttttagtctccaaaatcttgtgagccagttcacctaataaattcttt
ctcatatctatctatctatctatctatctatctatctatctatctatcat
ctatctacctaccatctaatgtataatctatctcatctatttatctgtca
tcaatctgtcatctatatctgcctacctatcatctctatgtatctatctc
atctatttatctaacatcaatctatcatctattatctgctataatatata
tctatgtatcaacctatcatttaatatatcatctatctcatctaattatc
tatcatcaatctatctgtcatctataatctgcctacttatcatatctatc
tatctatctatctatctaccatctatcttatcactgtagtcacaggttct
ataccaccagatttaattcactatgaattggtgatatttgtaaacttgtg
tacaagttaagacatcttttttatcttattattcttttctaataatgtac
accttctgtactgtctcgttttgtgggtcaattgacacaactggagttat
cacagaggaaggagcctcccttgaggaaatatctccatgagatccagctg
taaggcattttctcattagtgatcaagggtgggagagcccatcccatgtg
gggtggtgcatccctgggctgttgatctggttctatatcaagatccagca
ggttgaagcaaggcaggggaagcaagtcagttagcagccacctccatggg
cccctgcatcaatccgctctgcttcaagttcctggcccagtttgagatca
gtctgacttcacttgtggattgaacgcatggaagttaagctacaactttc
tccacttgactgttctggatgcgtagttttctgctca
gaattccagggcagtgtgcagcacacacttagtgtccgtactactttagg
caataacattgctagacagtcattcttaccaacctcaagaacagccaaga
aaataaagaagggcagagacagctctcccctgtttccagaataaccccta
gaagatctaagaccagtgccctttgagccagttagctcccagacttctgt
gaatggcagtgtcaccaccccttgcttgggctccacagcgaacaagacaa
atagacacttggagatttcaaaagctgactgcatagatgagaaggctaaa
acaccacacgtttgcttggctttggaacaattgaaccacagatgcccagt
gcctaatatttttctgcttttttaatcttccacgcaatctctcccattca
tcatgtcttcctcctttgcagcaagcgaaatcccaccacaataaagaaat
tgccaaaggactgcccagcgccttttcttcccctagaatctcgcagtgtt
aaatattgcttgtaataagtgggctatcagatgggctcagatctcatatg
tagccgttttgattgagagggattaggagaagtaaaccttgatctattct
ttgtcctctgagctcatttttttgcttccgtaatatgtacttggcctctc
ctttattcttttcctttatgtctccttcaaggtagtttatgtaattattg
tgtttcctactgtaccacaaacacacacaaaaaagaactttcaaactcat
caaatataactccaataagttttaattttatgcacacatcataggcctgc
agtatatgagctggcagattaataatgctggcagtgccatttagaatgtc
cattgtggttaattcacagagaagcactcaatattatggtggcccaggac
atttttacagttcataggaccctttttttcacaggctagggattgggaga
aaatattctaagacataggccaactgttattaaaatattttcaatatctt
tgggtctaatgtcttctctcaatccacgtattgcaaaatatgaagatgcc
agtatctctcatggaagaaaagcacatatacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_30882094_30883187
seq2: B6Ng01-013B19.g_64_1146

seq1  GAATTCCAGGGCAGTGTGCAGCACACACTTAGTGTCCGTACTACTTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCAGTGTGCAGCACACACTTAGTGTCCGTACTACTTTAGG  50

seq1  CAATAACATTGCTAGACAGTCATTCTTACCAACCTCAAGAACAGCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACATTGCTAGACAGTCATTCTTACCAACCTCAAGAACAGCCAAGA  100

seq1  AAATAAAGAAGGGCAGAGACAGCTCTCCCCTGTTTCCAGAATAACCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAAGGGCAGAGACAGCTCTCCCCTGTTTCCAGAATAACCCCTA  150

seq1  GAAGATCTAAGACCAGTGCCCTTTGAGCCAGTTAGCTCCCAGACTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTAAGACCAGTGCCCTTTGAGCCAGTTAGCTCCCAGACTTCTGT  200

seq1  GAATGGCAGTGTCACCACCCCTTGCTTGGGCTCCACAGCGAACAAGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCAGTGTCACCACCCCTTGCTTGGGCTCCACAGCGAACAAGACAA  250

seq1  ATAGACACTTGGAGATTTCAAAAGCTGACTGCATAGATGAGAAGGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACACTTGGAGATTTCAAAAGCTGACTGCATAGATGAGAAGGCTAAA  300

seq1  ACACCACACGTTTGCTTGGCTTTGGAACAATTGAACCACAGATGCCCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACACGTTTGCTTGGCTTTGGAACAATTGAACCACAGATGCCCAGT  350

seq1  GCCTAATATTTTTCTGCTTTTTTAATCTTCCACGCAATCTCTCCCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATATTTTTCTGCTTTTTTAATCTTCCACGCAATCTCTCCCATTCA  400

seq1  TCATGTCTTCCTCCTTTGCAGCAAGCGAAATCCCACCACAATAAAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTTCCTCCTTTGCAGCAAGCGAAATCCCACCACAATAAAGAAAT  450

seq1  TGCCAAAGGACTGCCCAGCGCCTTTTCTTCCCCTAGAATCTCGCAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGGACTGCCCAGCGCCTTTTCTTCCCCTAGAATCTCGCAGTGTT  500

seq1  AAATATTGCTTGTAATAAGTGGGCTATCAGATGGGCTCAGATCTCATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGCTTGTAATAAGTGGGCTATCAGATGGGCTCAGATCTCATATG  550

seq1  TAGCCGTTTTGATTGAGAGGGATTAGGAGAAGTAAACCTTGATCTATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGTTTTGATTGAGAGGGATTAGGAGAAGTAAACCTTGATCTATTCT  600

seq1  TTGTCCTCTGAGCTCATTTTTTTGCTTCCGTAATATGTACTTGGCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTGAGCTCATTTTTTTGCTTCCGTAATATGTACTTGGCCTCTC  650

seq1  CTTTATTCTTTTCCTTTATGTCTCCTTCAAGGTAGTTTATGTAATTATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCTTTTCCTTTATGTCTCCTTCAAGGTAGTTTATGTAATTATTG  700

seq1  TGTTTCCTACTGTACCACAAACACACACAAAAAAGAACTTTCAAACTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTACTGTACCACAAACACACACAAAAAAGAACTTTCAAACTCAT  750

seq1  CAAATATAACTCCAATAAGTTTTAATTTTATGCACACATCATAGGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAACTCCAATAAGTTTTAATTTTATGCACACATCATAGGCCTGC  800

seq1  AGTATATGAGCTGGCAGATTAATAATGCTGGCAGTGCCATTTAGAATGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATGAGCTGGCAGATTAATAATGCTGGCAGTGCCATTTAGAATGTC  850

seq1  CATTGTGGTTAATTCACAGAGAAGCACTCAATATTAT-GTGGCCCAAGAC  899
      ||||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  CATTGTGGTTAATTCACAGAGAAGCACTCAATATTATGGTGGCCCAGGAC  900

seq1  ATTTTTACAGTTCATAGGAACACTATTTTCACAAGCTAGGGAATTGGGAG  949
      ||||||||||||||||||| |  | |||||||| ||||||| ||||||||
seq2  ATTTTTACAGTTCATAGGACCCTTTTTTTCACAGGCTAGGG-ATTGGGAG  949

seq1  -AAATA-TCTAAGACATAAGCCAACTGTTATTAAAATAATTTTTCAATAT  997
       ||||| ||||||||||| |||||||||||||||||||  ||||||||||
seq2  AAAATATTCTAAGACATAGGCCAACTGTTATTAAAATA--TTTTCAATAT  997

seq1  CTTTGGGTTCTAATGTTCTTTCTCTCAAATTCCACGTATTGCAAAAATAT  1047
      ||||||| ||||||||   |||||||||  |||||||||||| |||||||
seq2  CTTTGGG-TCTAATGT--CTTCTCTCAA--TCCACGTATTGC-AAAATAT  1041

seq1  GAAAGATGCCAAGTATTTTTCTCATGAAGAAAAAGCACAAAATACAT  1094
      | |||||||| ||||  | ||||||| |  |||||||| | ||||||
seq2  G-AAGATGCC-AGTA--TCTCTCATGGAAGAAAAGCAC-ATATACAT  1083