BAC Information

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BAC

Clone NameB6Ng01-014I14
Chromosome15 (Build37)
Map Location 32,247,707 - 32,424,656
singlet/doubletdoublet
Overlap geneSema5a
Upstream gene5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231, Tas2r119, 0610007N19Rik
Downstream geneLOC100040962, Sdc2, Pgcp, 1700084J12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014I14.bB6Ng01-014I14.g
ACCDH849050DH849051
length8551,054
definitionDH849050|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I14, 5' end.DH849051|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,247,707 - 32,248,562)(32,423,593 - 32,424,656)
sequence
gaattcattttgtaagtattgagaattttttatatattcatttcagagaa
actgacagtctcctggggaaactacagtctccttccaacccacccctata
tatccaattttagttatttaggaaatgttagtcctcttaaacatgtgtcc
taccagttcctccatctctagtttgtggagcatttagataaacactgatg
ttgattatttactaatggtctttttacaattcagcagcgaattgacctag
gcccaggcatttttgtttatagacttctttgtttaaatgatttatattct
cttggtttaattgagatgggttatatgttttgtgttcttggtttaatttt
ggaagggtacttgtttctccaaaaatttcaatttctttttcttttatttt
cctctacctacctttatctgcatatttaatacaacctttataaatactag
taaatgtgtgcttgcaaaatagaaaaagagccagcaactgctcagctatc
agtcactccactgtgggatgcccgactcgccagcaagtagacgccacaac
aggatccttctgcaacacgtttattgggagagcatggactgcgtaggcga
aagaccccgagccccagaaaatggcgctgcttatataggcctaggagtga
tatgtccatacatgattggttatgctaccagtacctcattaatatgcatc
gggccaggcagtgactcggcaaaaaactcttatgcacatgcgcacaccta
gtcggccatcactggaaagagaggtccattggacaggcaaactttatatg
ccccagtacaggagaacgccagggccaaaagtgggaatgggtgggtaggg
gagtg
gaattctctgacaaacatgaatgtgagttgatactggtttctgtgataaa
ttaccattatcatggtggtataagtgaatgtaattatattctttcgcagc
tctagggaggagaaatcagtatgacagggtcatagttaaggcgctggcag
agctctactctgtcaggattcttgaatagggagcccccttcttgccttgc
cttcttaggctctagcttctgctataatgttactgtggaccaccattcca
attttcatgcaatgtctcttcaagtctctgttgcatcccccccttgtatt
agtgtgtgattcacccttgcatggttatcagaaagactactgaaatgtgc
tcaggggcatcataagtaccccaagatgccctttgaaactcaagctcttt
aacggggtcccatgtggaccacacacagacacattccaggttccagggat
tctggcacaggatctgttcgagggccattttcctgtctgctgtaatgtgt
ccttgggaatcctgccagcatcacgggaccctgcacaaactgggaagatc
agagataggcaagaacagatgcctcacacccatactagatgaagcttgtg
agtttctcagttatccctgatactgttttgtcgatgctaagagaccccta
tagatgtgacccagcacggggccaaactgcatccagcatctccctttcct
tttcagtatggccaaaaggctagtgactgaaataacacatctcattcacc
tctcatttccatgcagatatctcttctgttaatgaacctggctcattcac
ggtagtgcctagggcagctgtcatgaaccatgaagaaaactaccattgat
actgggaaacacttagacaaagaaaaaccctttataaaccaatacagaat
cagatgctataaagattagagtcttaaggtggtgcacgcctttaatccca
gcactctttatccaagatgcagaggcagcagatttctgagttgagtcagg
ctggtctacaagtgagttcaggacatcagactttacagagaactcgtctc
gaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32247707_32248562
seq2: B6Ng01-014I14.b_44_898

seq1  GAATTCATTTTGTAAGTATTGAGAATTTTTTATATATTCATTTCAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTGTAAGTATTGAGAATTTTTTATATATTCATTTCAGAGAA  50

seq1  ACTGACAGTCTCCTGGGGAAACTACAGTCTCCTTCCAACCCACCCCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGTCTCCTGGGGAAACTACAGTCTCCTTCCAACCCACCCCTATA  100

seq1  TATCCAATTTTAGTTATTTAGGAAATGTTAGTCCTCTTAAACATGTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATTTTAGTTATTTAGGAAATGTTAGTCCTCTTAAACATGTGTCC  150

seq1  TACCAGTTCCTCCATCTCTAGTTTGTGGAGCATTTAGATAAACACTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTTCCTCCATCTCTAGTTTGTGGAGCATTTAGATAAACACTGATG  200

seq1  TTGATTATTTACTAATGGTCTTTTTACAATTCAGCAGCGAATTGACCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATTTACTAATGGTCTTTTTACAATTCAGCAGCGAATTGACCTAG  250

seq1  GCCCAGGCATTTTTGTTTATAGACTTCTTTGTTTAAATGATTTATATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGCATTTTTGTTTATAGACTTCTTTGTTTAAATGATTTATATTCT  300

seq1  CTTGGTTTAATTGAGATGGGTTATATGTTTTGTGTTCTTGGTTTAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTAATTGAGATGGGTTATATGTTTTGTGTTCTTGGTTTAATTTT  350

seq1  GGAAGGGTACTTGTTTCTCCAAAAATTTCAATTTCTTTTTCTTTTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGTACTTGTTTCTCCAAAAATTTCAATTTCTTTTTCTTTTATTTT  400

seq1  CCTCTACCTACCTTTATCTGCATATTTAATACAACCTTTATAAATACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTACCTTTATCTGCATATTTAATACAACCTTTATAAATACTAG  450

seq1  TAAATGTGTGCTTGCAAAATAGAAAAAGAGCCAGCAACTGCTCAGCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGTGCTTGCAAAATAGAAAAAGAGCCAGCAACTGCTCAGCTATC  500

seq1  AGTCACTCCACTGTGGGATGCCCGACTCGCCAGCAAGTAGACGCCACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCCACTGTGGGATGCCCGACTCGCCAGCAAGTAGACGCCACAAC  550

seq1  AGGATCCTTCTGCAACACGTTTATTGGGAGAGCATGGACTGCGTAGGCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTTCTGCAACACGTTTATTGGGAGAGCATGGACTGCGTAGGCGA  600

seq1  AAGACCCCGAGCCCCAGAAAATGGCGCTGCTTATATAGGCCTAGGAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCCGAGCCCCAGAAAATGGCGCTGCTTATATAGGCCTAGGAGTGA  650

seq1  TATGTCCATACATGATTGGTTATGCTACCAGTACCTCATTAATATGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCATACATGATTGGTTATGCTACCAGTACCTCATTAATATGCATC  700

seq1  GGGCCAGGCAGTGACTCGGCAAAAAACTCTTATGCACATGCGCACACCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGGCAGTGACTCGGCAAAAAACTCTTATGCACATGCGCACACCTA  750

seq1  GTCGGCCATCACTGGAAAGAGAGGTCCATTGGACAGGCAAACTTTATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGCCATCACTGGAAAGAGAGGTCCATTGGACAGGCAAACTTTATATG  800

seq1  CCCCAGTACAGGAGAACGCCAGGGCCAAAAAGTGGGAATGGGTGGGTAGG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCCAGTACAGGAGAACGCCAGGGCC-AAAAGTGGGAATGGGTGGGTAGG  849

seq1  GGAGTG  856
      ||||||
seq2  GGAGTG  855

seq1: chr15_32423593_32424656
seq2: B6Ng01-014I14.g_68_1121 (reverse)

seq1  TTTCGAGACAGGGTTTCTCTGTATAGTCTTGGATGTCCTGGAACTCACTT  50
      |||||||||  |  ||||||||| |||||  |||||||| |||||||| |
seq2  TTTCGAGAC--GAGTTCTCTGTAAAGTCT--GATGTCCT-GAACTCAC-T  44

seq1  TGTAGACCAGGCTGACCTCAAACTCAGAAATCTGCCTGCCTCTGCATCCT  100
      |||||||||| |||| ||| |||||||||||||| ||||||||||||| |
seq2  TGTAGACCAGCCTGA-CTC-AACTCAGAAATCTG-CTGCCTCTGCATCTT  91

seq1  GGGATTAAAGAGTGCTGGGATTAAAGGCGTGCACCACC-TGAGACTTCTA  149
      ||   ||||||||||||||||||||||||||||||||| | |||| ||||
seq2  GG--ATAAAGAGTGCTGGGATTAAAGGCGTGCACCACCTTAAGAC-TCTA  138

seq1  ATCTTTATAGCATCTGATTCTGTATTGGTTTATAAA-GGTTTTTCTTTGT  198
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATCTTTATAGCATCTGATTCTGTATTGGTTTATAAAGGGTTTTTCTTTGT  188

seq1  CTAAGTGTTT-CCAGTATCAATGGTAGTTTTTCTTCATGGTTCATGACAG  247
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  CTAAGTGTTTCCCAGTATCAATGGTAG-TTTTCTTCATGGTTCATGACAG  237

seq1  CTGCCCTAGGCACTACCGTGAATGAGCCAGGTTCATTAACAGAAGAGATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTAGGCACTACCGTGAATGAGCCAGGTTCATTAACAGAAGAGATA  287

seq1  TCTGCATGGAAATGAGAGGTGAATGAGATGTGTTATTTCAGTCACTAGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGGAAATGAGAGGTGAATGAGATGTGTTATTTCAGTCACTAGCC  337

seq1  TTTTGGCCATACTGAAAAGGAAAGGGAGATGCTGGATGCAGTTTGGCCCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCCATACTGAAAAGGAAAGGGAGATGCTGGATGCAGTTTGGCCCC  387

seq1  GTGCTGGGTCACATCTATAGGGGTCTCTTAGCATCGACAAAACAGTATCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGTCACATCTATAGGGGTCTCTTAGCATCGACAAAACAGTATCA  437

seq1  GGGATAACTGAGAAACTCACAAGCTTCATCTAGTATGGGTGTGAGGCATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAACTGAGAAACTCACAAGCTTCATCTAGTATGGGTGTGAGGCATC  487

seq1  TGTTCTTGCCTATCTCTGATCTTCCCAGTTTGTGCAGGGTCCCGTGATGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGCCTATCTCTGATCTTCCCAGTTTGTGCAGGGTCCCGTGATGC  537

seq1  TGGCAGGATTCCCAAGGACACATTACAGCAGACAGGAAAATGGCCCTCGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGATTCCCAAGGACACATTACAGCAGACAGGAAAATGGCCCTCGA  587

seq1  ACAGATCCTGTGCCAGAATCCCTGGAACCTGGAATGTGTCTGTGTGTGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTGTGCCAGAATCCCTGGAACCTGGAATGTGTCTGTGTGTGGT  637

seq1  CCACATGGGACCCCGTTAAAGAGCTTGAGTTTCAAAGGGCATCTTGGGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGGACCCCGTTAAAGAGCTTGAGTTTCAAAGGGCATCTTGGGGT  687

seq1  ACTTATGATGCCCCTGAGCACATTTCAGTAGTCTTTCTGATAACCATGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGATGCCCCTGAGCACATTTCAGTAGTCTTTCTGATAACCATGCA  737

seq1  AGGGTGAATCACACACTAATACAAGGGGGGGATGCAACAGAGACTTGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAATCACACACTAATACAAGGGGGGGATGCAACAGAGACTTGAAG  787

seq1  AGACATTGCATGAAAATTGGAATGGTGGTCCACAGTAACATTATAGCAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGCATGAAAATTGGAATGGTGGTCCACAGTAACATTATAGCAGA  837

seq1  AGCTAGAGCCTAAGAAGGCAAGGCAAGAAGGGGGCTCCCTATTCAAGAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGCCTAAGAAGGCAAGGCAAGAAGGGGGCTCCCTATTCAAGAAT  887

seq1  CCTGACAGAGTAGAGCTCTGCCAGCGCCTTAACTATGACCCTGTCATACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAGAGTAGAGCTCTGCCAGCGCCTTAACTATGACCCTGTCATACT  937

seq1  GATTTCTCCTCCCTAGAGCTGCGAAAGAATATAATTACATTCACTTATAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCCTCCCTAGAGCTGCGAAAGAATATAATTACATTCACTTATAC  987

seq1  CACCATGATAATGGTAATTTATCACAGAAACCAGTATCAACTCACATTCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGATAATGGTAATTTATCACAGAAACCAGTATCAACTCACATTCA  1037

seq1  TGTTTGTCAGAGAATTC  1064
      |||||||||||||||||
seq2  TGTTTGTCAGAGAATTC  1054