BAC Information

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BAC

Clone NameB6Ng01-014M05
Chromosome15 (Build37)
Map Location 65,923,494 - 66,071,011
singlet/doubletdoublet
Overlap geneKcnq3
Upstream geneLOC100040790, LOC665836, C920006C10Rik, Oc90, F930104E18Rik, LOC100040835
Downstream geneLrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014M05.bB6Ng01-014M05.g
ACCDH849213DH849214
length1,038494
definitionDH849213|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M05, 5' end.DH849214|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,069,972 - 66,071,011)(65,923,494 - 65,923,993)
sequence
gaattcatctgtcatgggtgggcgtgtgtgcaggcagatgggattcccca
gtcacgtgtgcctgcagacagcgggacacacagacacacgaggaagccct
gcttcttggaggagacaggagggagcctcagcttctgcagtcggaggcag
tggatctgctgtctgtaccatatggggcaaacgctttgttctgttctgga
agaaaaagggtattttccatcttgcagtatccttgacaacgcctgcttgg
caacgagttaaccgttggggaacacccgtctcctgggaatcatagaatca
gcttattaattctttctgcaattgttccattcctactgtgttccagagtt
aggtgtgggagagaagatagagataaatggagatctgtataaaatctttt
agaagcacaagggttgggttactgacagtgggaattttctaagtaattgc
tagttgacagctacttcacctagtctgaggcagtcagggaaggcttcttg
gagaaggtaataatttaattgccatctacaagatcacttgataaggaaga
ggggagatttttatttttgagaattggaacattaagtatgtttgccattg
ttgtgactaaacacccgacacagagtgtcctgaaggaaggcttgttttgt
tcacaagtttgaggacactgggcatcacagtgaggttgtcaacttcttgg
ctgtgaggacaggacttgggggccccttgctcacatgtgagaagacaggg
aaacaggtattggataggaaatggggttggactataagcaacctacttct
agctaagtcctacttcccaaagtacctggaaaaccatacccaaacacaag
agcctatgtgtgttggggcccgggtaacacaataatgactttcttgcagt
tgtgacaaacactatcagaagcagcttgtgctagcaggagtagaggaagg
atttattttagtcatagtttgcaggcacagtcatcaggatatgactatga
caagatgccatgtgactgaagcattcaagctgagtatg
acatacataaatggaattcttaggaattgttaatttttccttctcaaatc
cctagtaggaaacttgggcacattgctacatccagtatggccagggccct
gaggctaatgcaaagaaactgcttccagcaaataaactagctaccttgct
ctctaattcttgtgcaaatggccagaaccctgtgggctaggcaaagggga
cttaaatcaacccaggaaataaataaataagtgcctcaaaataacaagat
gagagatttccaataaacggcttctgcccaggcccttgagagaagagtca
tgtggagagaaaatgccaaccactgcagatttacaaagcgactgtagcaa
aacggaaataggtttgcagagacacgtgctgtctccacagcacagcttca
gggtttcttttatgagccattctggaacagaaacatccctttaagtcatt
atttggtaaaaggggaagtgtggggttgttttgttttgttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66069972_66071011
seq2: B6Ng01-014M05.b_41_1069 (reverse)

seq1  CTTGAAATGCTTCAGTCCCCATGCCATCTTGTCATATGTCATATATCATG  50
      |||| ||||||||||| | |||| |||||||||||| |||  ||||| ||
seq2  CTTG-AATGCTTCAGT-CACATGGCATCTTGTCATA-GTC--ATATCCTG  45

seq1  ATGGACTGTGCCTGCAAACTATGAACTAAAATAAATCCTTCCTCTACTCC  100
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AT-GACTGTGCCTGCAAACTATG-ACTAAAATAAATCCTTCCTCTACTCC  93

seq1  TGCTAGCACCAAGCTGCTTCTTGATAGTGTTTTGTCACAACTGCAAGAAA  150
      |||||||| ||||||||||| |||||||| ||||||||||||||||| ||
seq2  TGCTAGCA-CAAGCTGCTTC-TGATAGTG-TTTGTCACAACTGCAAG-AA  139

seq1  AGTCATTATTGTGTTACCCCGGCCCCAACACACATAGGCTCTTGTGTTTG  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTCATTATTGTGTTACCCGGGCCCCAACACACATAGGCTCTTGTGTTTG  189

seq1  GGTATGGTTTTCCAGGTACTTTGGGAAGTAGGACTTAGCTAGAAGTAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGTTTTCCAGGTACTTTGGGAAGTAGGACTTAGCTAGAAGTAGGT  239

seq1  TGCTTATAGTCCAACCCCATTTCCTATCCAATACCTGTTTCCCTGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATAGTCCAACCCCATTTCCTATCCAATACCTGTTTCCCTGTCTTC  289

seq1  TCACATGTGAGCAAGGGGCCCCCAAGTCCTGTCCTCACAGCCAAGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTGAGCAAGGGGCCCCCAAGTCCTGTCCTCACAGCCAAGAAGTT  339

seq1  GACAACCTCACTGTGATGCCCAGTGTCCTCAAACTTGTGAACAAAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCTCACTGTGATGCCCAGTGTCCTCAAACTTGTGAACAAAACAAG  389

seq1  CCTTCCTTCAGGACACTCTGTGTCGGGTGTTTAGTCACAACAATGGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCAGGACACTCTGTGTCGGGTGTTTAGTCACAACAATGGCAAA  439

seq1  CATACTTAATGTTCCAATTCTCAAAAATAAAAATCTCCCCTCTTCCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAATGTTCCAATTCTCAAAAATAAAAATCTCCCCTCTTCCTTAT  489

seq1  CAAGTGATCTTGTAGATGGCAATTAAATTATTACCTTCTCCAAGAAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATCTTGTAGATGGCAATTAAATTATTACCTTCTCCAAGAAGCCT  539

seq1  TCCCTGACTGCCTCAGACTAGGTGAAGTAGCTGTCAACTAGCAATTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGACTGCCTCAGACTAGGTGAAGTAGCTGTCAACTAGCAATTACTT  589

seq1  AGAAAATTCCCACTGTCAGTAACCCAACCCTTGTGCTTCTAAAAGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCCCACTGTCAGTAACCCAACCCTTGTGCTTCTAAAAGATTTT  639

seq1  ATACAGATCTCCATTTATCTCTATCTTCTCTCCCACACCTAACTCTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATCTCCATTTATCTCTATCTTCTCTCCCACACCTAACTCTGGAA  689

seq1  CACAGTAGGAATGGAACAATTGCAGAAAGAATTAATAAGCTGATTCTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGGAATGGAACAATTGCAGAAAGAATTAATAAGCTGATTCTATG  739

seq1  ATTCCCAGGAGACGGGTGTTCCCCAACGGTTAACTCGTTGCCAAGCAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGGAGACGGGTGTTCCCCAACGGTTAACTCGTTGCCAAGCAGGC  789

seq1  GTTGTCAAGGATACTGCAAGATGGAAAATACCCTTTTTCTTCCAGAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAAGGATACTGCAAGATGGAAAATACCCTTTTTCTTCCAGAACAG  839

seq1  AACAAAGCGTTTGCCCCATATGGTACAGACAGCAGATCCACTGCCTCCGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCGTTTGCCCCATATGGTACAGACAGCAGATCCACTGCCTCCGA  889

seq1  CTGCAGAAGCTGAGGCTCCCTCCTGTCTCCTCCAAGAAGCAGGGCTTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAAGCTGAGGCTCCCTCCTGTCTCCTCCAAGAAGCAGGGCTTCCT  939

seq1  CGTGTGTCTGTGTGTCCCGCTGTCTGCAGGCACACGTGACTGGGGAATCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTCTGTGTGTCCCGCTGTCTGCAGGCACACGTGACTGGGGAATCC  989

seq1  CATCTGCCTGCACACACGCCCACCCATGACAGATGAATTC  1040
      ||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCCTGCACACACGCCCACCCATGACAGATGAATTC  1029

seq1: chr15_65923494_65923993
seq2: B6Ng01-014M05.g_66_565

seq1  GAATTCACATACATAAATGGAATTCTTAGGAATTGTTAATTTTTCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATACATAAATGGAATTCTTAGGAATTGTTAATTTTTCCTTCT  50

seq1  CAAATCCCTAGTAGGAAACTTGGGCACATTGCTACATCCAGTATGGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCTAGTAGGAAACTTGGGCACATTGCTACATCCAGTATGGCCAG  100

seq1  GGCCCTGAGGCTAATGCAAAGAAACTGCTTCCAGCAAATAAACTAGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGAGGCTAATGCAAAGAAACTGCTTCCAGCAAATAAACTAGCTAC  150

seq1  CTTGCTCTCTAATTCTTGTGCAAATGGCCAGAACCCTGTGGGCTAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTCTAATTCTTGTGCAAATGGCCAGAACCCTGTGGGCTAGGCAA  200

seq1  AGGGGACTTAAATCAACCCAGGAAATAAATAAATAAGTGCCTCAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACTTAAATCAACCCAGGAAATAAATAAATAAGTGCCTCAAAATAA  250

seq1  CAAGATGAGAGATTTCCAATAAACGGCTTCTGCCCAGGCCCTTGAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAGAGATTTCCAATAAACGGCTTCTGCCCAGGCCCTTGAGAGAA  300

seq1  GAGTCATGTGGAGAGAAAATGCCAACCACTGCAGATTTACAAAGCGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGTGGAGAGAAAATGCCAACCACTGCAGATTTACAAAGCGACTG  350

seq1  TAGCAAAACGGAAATAGGTTTGCAGAGACACGTGCTGTCTCCACAGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAACGGAAATAGGTTTGCAGAGACACGTGCTGTCTCCACAGCACA  400

seq1  GCTTCAGGGTTTCTTTTATGAGCCATTCTGGAACAGAAACATCCCTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGGGTTTCTTTTATGAGCCATTCTGGAACAGAAACATCCCTTTAA  450

seq1  GTCATTATTTGGTAAAAGGGGAAGTGTGGGGTTGTTTTGTTTTGTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTATTTGGTAAAAGGGGAAGTGTGGGGTTGTTTTGTTTTGTTTTGT  500