BAC Information

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BAC

Clone NameB6Ng01-016P06
Chromosome15 (Build37)
Map Location 28,899,242 - 28,900,131
singlet/doubletsinglet
Overlap genenone
Upstream geneTrio, LOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016P06.bB6Ng01-016P06.g
ACCDH850773DH850774
length676904
definitionDH850773|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P06, 5' end.DH850774|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataagcctgaagtctaatacgttcagtcacatggtcagggtta
acatcaatattgtacatcatattgattttgcattttatactgtgaaaatg
cacattaccttggtggtcttcgaaaaatgaatacattcattgttaaatct
tgaataaagcatcatagaaatcttaattgaagattttaatgaaagtgatc
attgctatcctccatcccccaacactcaaaattaagcattgccaagaatt
ctgaaatgccagggttaagaagttagggtctctggaacaaatgcagatat
atacagtcaaccactggactgagatcagggactcctatggaagattttaa
ggaaggattgaaggaactgaaggggatggcaaccccatatagtgtcaact
aacctggacccctatgagctgccaaccaaccaatgagactaaaccaacaa
ccaaagagcatacatgggctggtctatggccccaggcacatgtgtatcag
aagattaccttgcctttcctcagtaggagaggatgtgcctaatcctgtag
agacttgatgccccagagaagaggtatgcagggtggggaagggggtggaa
caccctctcagagaagaagcagaaagaggatggtgtgaagaaatctgtaa
ggtgaattgggggggaaggtcatttt

gaattcacctttggatagtttttatttggaacaaaaggagaagcaatagc
attataggaaagggagggctatgagatttaattaaagcatcactttaaag
agcaacattgtaataattagcatttggctgcttagcttctttaattagga
ctgcattttattctcccttatttcagagagtaataattgagtaatccttg
agtgtgtaactttatagcatcctgtttggctagatggctagtactcatgg
tgtgtgtgccaggaaggatgtcttttctgaggacaggaacatgtgtgact
gtgtcagtctttatagttgcttccttcatttagcacaatgtttatttact
atcaaatttggcatttgagagcaattttcttttttttctcttctttaaat
ttctttttacattccatattccataccccaccccacccccatccaccctt
ggactattccacatcccacacctcctctctaccccaccccatccccacat
ggatgcccccaacccccaccctacctgacctctgaactctatggggtctt
cagtctcttgagggttaggtgcatcatttctgaatgaatacagacctgga
agtcacttaatgtatgtgtgttaggggcctcatatcagctggtatatgct
gcctgtttggtggtccagtgtttgagagatctcagggtttcaaattaatt
gagactgctggtcctcctgcaggattgcccttctcctcagcttctttcaa
ccttctctaattcaacaacaggggtcagctgcttctgtccattggttgaa
tgcaactagatagaactagaaaatattatcctgagtgaggtactcagacc
caaaatgacatgaatgtatgtacttcacttataagtggatattagcaaac
aaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28899242_28900131
seq2: B6Ng01-016P06.g_67_955

seq1  GAATTCACCTTTGGATAGTTTTTATTTGGAACAAAAGGAGAAGCAATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTGGATAGTTTTTATTTGGAACAAAAGGAGAAGCAATAGC  50

seq1  ATTATAGGAAAGGGAGGGCTATGAGATTTAATTAAAGCATCACTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGAAAGGGAGGGCTATGAGATTTAATTAAAGCATCACTTTAAAG  100

seq1  AGCAACATTGTAATAATTAGCATTTGGCTGCTTAGCTTCTTTAATTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATTGTAATAATTAGCATTTGGCTGCTTAGCTTCTTTAATTAGGA  150

seq1  CTGCATTTTATTCTCCCTTATTTCAGAGAGTAATAATTGAGTAATCCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTTATTCTCCCTTATTTCAGAGAGTAATAATTGAGTAATCCTTG  200

seq1  AGTGTGTAACTTTATAGCATCCTGTTTGGCTAGATGGCTAGTACTCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTAACTTTATAGCATCCTGTTTGGCTAGATGGCTAGTACTCATGG  250

seq1  TGTGTGTGCCAGGAAGGATGTCTTTTCTGAGGACAGGAACATGTGTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCCAGGAAGGATGTCTTTTCTGAGGACAGGAACATGTGTGACT  300

seq1  GTGTCAGTCTTTATAGTTGCTTCCTTCATTTAGCACAATGTTTATTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGTCTTTATAGTTGCTTCCTTCATTTAGCACAATGTTTATTTACT  350

seq1  ATCAAATTTGGCATTTGAGAGCAATTTTCTTTTTTTTCTCTTCTTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTGGCATTTGAGAGCAATTTTCTTTTTTTTCTCTTCTTTAAAT  400

seq1  TTCTTTTTACATTCCATATTCCATACCCCACCCCACCCCCATCCACCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTACATTCCATATTCCATACCCCACCCCACCCCCATCCACCCTT  450

seq1  GGACTATTCCACATCCCACACCTCCTCTCTACCCCACCCCATCCCCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATTCCACATCCCACACCTCCTCTCTACCCCACCCCATCCCCACAT  500

seq1  GGATGCCCCCAACCCCCACCCTACCTGACCTCTGAACTCTATGGGGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCCCAACCCCCACCCTACCTGACCTCTGAACTCTATGGGGTCTT  550

seq1  CAGTCTCTTGAGGGTTAGGTGCATCATTTCTGAATGAATACAGACCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTTGAGGGTTAGGTGCATCATTTCTGAATGAATACAGACCTGGA  600

seq1  AGTCACTTAATGTATGTGTGTTAGGGGCCTCATATCAGCTGGTATATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTAATGTATGTGTGTTAGGGGCCTCATATCAGCTGGTATATGCT  650

seq1  GCCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGGTTTCAAATTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTGGTGGTCCAGTGTTTGAGAGATCTCAGGGTTTCAAATTAATT  700

seq1  GAGACTGCTGGTCCTCCTGCAGGATTGCCCTTCTCCTCAGCTTCTTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGCTGGTCCTCCTGCAGGATTGCCCTTCTCCTCAGCTTCTTTCAA  750

seq1  CCTTCTCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGGTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTAATTCAACAACAGGGGTCAGCTGCTTCTGTCCATTGGTTGAA  800

seq1  TGCAACTAGATAGAACTAGAAAATATTATCCTGAGTGAGGTAACTCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCAACTAGATAGAACTAGAAAATATTATCCTGAGTGAGGT-ACTCAGAC  849

seq1  CCAAAATGACATGAAAGGTATGTAC-TCACTAATAAGTGGA  890
      ||||||||||||| || |||||||| ||||| |||||||||
seq2  CCAAAATGACATG-AATGTATGTACTTCACTTATAAGTGGA  889


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