BAC Information

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BAC

Clone NameB6Ng01-016P21
Chromosome15 (Build37)
Map Location 82,264,993 - 82,475,782
singlet/doubletdoublet
Overlap geneCyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13
Upstream geneXpnpep3, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10
Downstream geneLOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3, Pacsin2, LOC414359, Ttll1, Bik, Mcat, Tspo, Ttll12, Scube1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016P21.bB6Ng01-016P21.g
ACCDH850801DH850802
length1,094626
definitionDH850801|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P21, 5' end.DH850802|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,264,993 - 82,266,086)(82,475,157 - 82,475,782)
sequence
gaattccaagcttattttgtagaacttgctctgagatttctactctaatc
tagtaaacttcaatgcctgatttggttcactatctttctttcaacactgg
aagcattttgtctgaataagtaacattcttacgaaatcaaagtccaaggt
tggctcaaacgattgcctagaatattggaacactggtggaggccaggaag
caatgttcaatctaacttagctatttgttgaatcattcctttgaggcact
tataataaaacaataatgaaagaaagcatgcaaaacccttcatcagacta
tcacaatgacatatctggaccatatctgtgttatgcgatgccaaagactc
caggagaccagtttctgtgaaactttttgcctcaggacggcagccaagct
tttggacttgtcatgcagactccactggagtgggtgtggcaagagttcag
gcacgtacgaccaaagagcagacaaagaagtctcaagtaccttatgatgc
tatcaaagacaaggtcttaccatgttgcaaagtcttgtgcatcattcagt
cctgaattcagagaggagcttggatgcctgaatctctatttgctgtgtcc
tatctggcagcactgcccatgtcaaggaaccagaattttttcatgtgtga
tgaaatgctaaggggccctgggacagttttctggctcttgcaaggccaca
gctgggatgtcacatctactgtgattcctttgatgaacttaacacataag
atgccaccgtaataggcattatcaggctggggatttagcttgttaagaac
attttcccaggatatatgagaacaacactaagcaagacacacacacacac
acacacacacacacacacacacacacacacacacacacacctgcacaaac
atacatggggatgcacaagaggagccagagaaatggttcagagggtaagg
agcttgcccggcaagcatagtgtttgagttttatttctcacccatgtagt
aaggtgagaactgactctgtatgctctcctggttctgaacatcctgtgtg
gccatagcccctccctccacatcatgtatacacaaaccacacat
gaattcctgattgatagcatccttagtagttttgttgagtaatttctgta
cagttgtcctcagtgatgattgatattctctgaagaccacacaaggctct
gcaagctctgccccccggaagcccgtgtttccagggctgttttgatagaa
ccacaaagtgtggctttggcctcattgtcctaataataagtgacagtggg
cattgtttatgtgatggttggctgcttgtctgctcactttacacagatgt
atttgcaagtctttggctcatacttcctacagatatctgatacaggattt
tatttctgacttttttttttttttttgagacagggtttctctgtatagcc
ctggctgtcctggaactcactttgtagaccaggctggcctcaaacttaga
aatccacttgcctctgcctcccgggtgctgggattaaaggcatgtgtcac
cacgcccggctgactcttactatcttgtcagacctctgggttgccattac
tctcttcctcccattgtttgtatctcttcctcccttttaacagtgacctt
gttaaagaacatttggatttatttattatttagatgcgggtgtgtgtacc
acatgtttatttgggggggggggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_82264993_82266086
seq2: B6Ng01-016P21.b_46_1139

seq1  GAATTCCAAGCTTATTTTGTAGAACTTGCTCTGAGATTTCTACTCTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTTATTTTGTAGAACTTGCTCTGAGATTTCTACTCTAATC  50

seq1  TAGTAAACTTCAATGCCTGATTTGGTTCACTATCTTTCTTTCAACACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAACTTCAATGCCTGATTTGGTTCACTATCTTTCTTTCAACACTGG  100

seq1  AAGCATTTTGTCTGAATAAGTAACATTCTTACGAAATCAAAGTCCAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTGTCTGAATAAGTAACATTCTTACGAAATCAAAGTCCAAGGT  150

seq1  TGGCTCAAACGATTGCCTAGAATATTGGAACACTGGTGGAGGCCAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAAACGATTGCCTAGAATATTGGAACACTGGTGGAGGCCAGGAAG  200

seq1  CAATGTTCAATCTAACTTAGCTATTTGTTGAATCATTCCTTTGAGGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTCAATCTAACTTAGCTATTTGTTGAATCATTCCTTTGAGGCACT  250

seq1  TATAATAAAACAATAATGAAAGAAAGCATGCAAAACCCTTCATCAGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAAACAATAATGAAAGAAAGCATGCAAAACCCTTCATCAGACTA  300

seq1  TCACAATGACATATCTGGACCATATCTGTGTTATGCGATGCCAAAGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGACATATCTGGACCATATCTGTGTTATGCGATGCCAAAGACTC  350

seq1  CAGGAGACCAGTTTCTGTGAAACTTTTTGCCTCAGGACGGCAGCCAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACCAGTTTCTGTGAAACTTTTTGCCTCAGGACGGCAGCCAAGCT  400

seq1  TTTGGACTTGTCATGCAGACTCCACTGGAGTGGGTGTGGCAAGAGTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTTGTCATGCAGACTCCACTGGAGTGGGTGTGGCAAGAGTTCAG  450

seq1  GCACGTACGACCAAAGAGCAGACAAAGAAGTCTCAAGTACCTTATGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTACGACCAAAGAGCAGACAAAGAAGTCTCAAGTACCTTATGATGC  500

seq1  TATCAAAGACAAGGTCTTACCATGTTGCAAAGTCTTGTGCATCATTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGACAAGGTCTTACCATGTTGCAAAGTCTTGTGCATCATTCAGT  550

seq1  CCTGAATTCAGAGAGGAGCTTGGATGCCTGAATCTCTATTTGCTGTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTCAGAGAGGAGCTTGGATGCCTGAATCTCTATTTGCTGTGTCC  600

seq1  TATCTGGCAGCACTGCCCATGTCAAGGAACCAGAATTTTTTCATGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCAGCACTGCCCATGTCAAGGAACCAGAATTTTTTCATGTGTGA  650

seq1  TGAAATGCTAAGGGGCCCTGGGACAGTTTTCTGGCTCTTGCAAGGCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCTAAGGGGCCCTGGGACAGTTTTCTGGCTCTTGCAAGGCCACA  700

seq1  GCTGGGATGTCACATCTACTGTGATTCCTTTGATGAACTTAACACATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATGTCACATCTACTGTGATTCCTTTGATGAACTTAACACATAAG  750

seq1  ATGCCACCGTAATAGGCATTATCAGGCTGGGGATTTAGCTTGTTAAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACCGTAATAGGCATTATCAGGCTGGGGATTTAGCTTGTTAAGAAC  800

seq1  ATTTTCCCAGGATATATGAGAACAACACTAAGCAAGACACACACACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCAGGATATATGAGAACAACACTAAGCAAGACACACACACACAC  850

seq1  ACACACACACACACACACACACACACACACACACACACACCTGCACAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACCTGCACAAAC  900

seq1  ATACATGGGGATGCACAAGAGGAGCCAGAGAAATGG-TCAGAGGGTAAGG  949
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  ATACATGGGGATGCACAAGAGGAGCCAGAGAAATGGTTCAGAGGGTAA-G  949

seq1  GAGCTTGCCCGGCAAGCATAGTGTTTGAGTTTTATTTCTCAACCCATGTA  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGCTTGCCCGGCAAGCATAGTGTTTGAGTTTTATTTCTC-ACCCATGTA  998

seq1  GTAAGGTGAGAACTGACTCTGTATGCTTCTCCTGGTTCTGAACATCCTTG  1049
      |||||||||||||||||||||||||| |||||||||||||||||||||  
seq2  GTAAGGTGAGAACTGACTCTGTATGC-TCTCCTGGTTCTGAACATCCT--  1045

seq1  TTGTGGCCATAG---CTCTCCTCACATCATGTATACACAAA-CACACAT  1094
       |||||||||||   ||| |  ||||||||||||||||||| |||||||
seq2  GTGTGGCCATAGCCCCTCCCTCCACATCATGTATACACAAACCACACAT  1094

seq1: chr15_82475157_82475782
seq2: B6Ng01-016P21.g_68_693 (reverse)

seq1  TTACCCCCCCCCCCAAATAAACATGTGGTACACACACCCGCATCTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCCCCCCCCAAATAAACATGTGGTACACACACCCGCATCTAAATA  50

seq1  ATAAATAAATCCAAATGTTCTTTAACAAGGTCACTGTTAAAAGGGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATCCAAATGTTCTTTAACAAGGTCACTGTTAAAAGGGAGGAA  100

seq1  GAGATACAAACAATGGGAGGAAGAGAGTAATGGCAACCCAGAGGTCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAAACAATGGGAGGAAGAGAGTAATGGCAACCCAGAGGTCTGAC  150

seq1  AAGATAGTAAGAGTCAGCCGGGCGTGGTGACACATGCCTTTAATCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGTAAGAGTCAGCCGGGCGTGGTGACACATGCCTTTAATCCCAGC  200

seq1  ACCCGGGAGGCAGAGGCAAGTGGATTTCTAAGTTTGAGGCCAGCCTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGGGAGGCAGAGGCAAGTGGATTTCTAAGTTTGAGGCCAGCCTGGTC  250

seq1  TACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC  300

seq1  AAAAAAAAAAAAAAAAGTCAGAAATAAAATCCTGTATCAGATATCTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGTCAGAAATAAAATCCTGTATCAGATATCTGTAG  350

seq1  GAAGTATGAGCCAAAGACTTGCAAATACATCTGTGTAAAGTGAGCAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGAGCCAAAGACTTGCAAATACATCTGTGTAAAGTGAGCAGACA  400

seq1  AGCAGCCAACCATCACATAAACAATGCCCACTGTCACTTATTATTAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAACCATCACATAAACAATGCCCACTGTCACTTATTATTAGGAC  450

seq1  AATGAGGCCAAAGCCACACTTTGTGGTTCTATCAAAACAGCCCTGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCCAAAGCCACACTTTGTGGTTCTATCAAAACAGCCCTGGAAAC  500

seq1  ACGGGCTTCCGGGGGGCAGAGCTTGCAGAGCCTTGTGTGGTCTTCAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCTTCCGGGGGGCAGAGCTTGCAGAGCCTTGTGTGGTCTTCAGAGA  550

seq1  ATATCAATCATCACTGAGGACAACTGTACAGAAATTACTCAACAAAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATCATCACTGAGGACAACTGTACAGAAATTACTCAACAAAACTA  600

seq1  CTAAGGATGCTATCAATCAGGAATTC  626
      ||||||||||||||||||||||||||
seq2  CTAAGGATGCTATCAATCAGGAATTC  626