BAC Information

Click to search

BAC

Clone NameB6Ng01-018B22
Chromosome15 (Build37)
Map Location 56,720,039 - 56,720,591
singlet/doubletsinglet
Overlap geneLOC100040067
Upstream geneSntb1, LOC665348, LOC100039908, Hba-ps3, Has2, EG594843, LOC435442
Downstream geneLOC100039984, BC026439, Zhx2, Derl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018B22.bB6Ng01-018B22.g
ACCDH851610DH851611
length1,1381,005
definitionDH851610|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B22, 5' end.DH851611|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aattttgcaaattgctccttctaattcgttgaagaattgagttggaattt
taatgggggattgcattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttggtcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagggacttgaagtttttaatc
atacagatctttcactccttcgttagagtcacgccgagatatttttatat
tatttgtggctattgagaagggtggtgtttccctaatttctttctcagcc
tgttaatctttggtgagagaaaggtctatgacttggttgagttaatttat
attccagctacttcacccgaagcggtctaatcaggctaagagtcctcggt
gggtatttaaggggtccatctatataattccacctatc
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctaaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgatttttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttgggttgattcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgtgtcaagctgctagtatgtgcttgctcccgtttcttc
ttgaagcactcatagctatgatttcctcttaaaatgctttcatggtgtcc
taaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56720039_56720591
seq2: B6Ng01-018B22.g_522_1070 (reverse)

seq1  CTTTGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCTATGAG  50
      |||| |||||| |||||||||||| |||||||  || |||||||||||||
seq2  CTTTAGGACACCATGAAAGCATTT-TAAGAGG--AAATCATAGCTATGAG  47

seq1  TGCCTTCAAGAAAAAACGGGAGAGAGCACATACTAGCAGCTTGACAACAC  100
      || ||||||||| |||||||||  ||||||||||||||||||||| ||||
seq2  TG-CTTCAAGAAGAAACGGGAGCAAGCACATACTAGCAGCTTGAC-ACAC  95

seq1  ATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGA  145

seq1  CGGCAGGAAATAATCAAACTCAGGGGTGAAATCAA-CCAAGTGGAAACAA  199
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CGGCAGGAAATAATCAAACTCAGGGGTG-AATCAACCCAAGTGGAAACAA  194

seq1  GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAA  244

seq1  ATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGA  294

seq1  CAAAATCCTAATTAAC-AAAATCAGAAATGAAAAGGGAGACATAACAACA  348
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAAATCCTAATTAACAAAAATCAGAAATGAAAAGGGAGACATAACAACA  344

seq1  GATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATA  394

seq1  CTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGAT  444

seq1  ACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCC  494

seq1  ATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAA  544

seq1  AAGCC  553
      |||||
seq2  AAGCC  549