BAC Information

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BAC

Clone NameB6Ng01-018D10
Chromosome15 (Build37)
Map Location 51,051,657 - 51,159,237
singlet/doubletdoublet
Overlap genenone
Upstream geneTrps1, LOC100039644
Downstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D10.bB6Ng01-018D10.g
ACCDH851679DH851680
length5261,082
definitionDH851679|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D10, 5' end.DH851680|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,158,706 - 51,159,237)(51,051,657 - 51,052,744)
sequence
actctctgaacctgaagacaacacagagaagaaattatagtaggagggga
agggaaacctgagtaatttcttgggaatttaccaccaggaccacgtgaac
aatcctatgggcagaacaaagccgacgagtccccttgggaaaagggcata
agtacaggggtctccacaagaaatttctggaaaaggaaaactaggatatc
atctagtggatgcagttttcttccttatcatattgatagtattgagcagc
aaattaatgatgacttaaaagattattctcctttcaaaactaaaattctg
agaagaagggcaaccctgtaggaggtcttaattaatctgaacccccgaga
tctttcagacactggatcaccaaacacacagcatacaccagctgatacga
ggcccccatcacacatacagtagaggatttctgggtctgtgttcattcag
agatggtgcacctaaccctcaagggactggaggtcccatggagtttagag
gtcaggtgaggtggtgggtggggtat
gaattcagtttagagctgactgtcaactgtcatttaattagtaggagaga
ccttatgaagcacaattggcacaattatgttacttttaaaaataaaaatt
gcttcaacctttctaatgctttgtagcatgccatccccacatcgcctggc
acatttatgatttctataagaacaaatgcagaaactgtcttgaggattga
cacagcccatctgcttcaaatagctgctattgcaaaaatgccatattttc
tcctaacattcttttacacaaaagcagactgaaaagagcaggtattatta
agaaatgatcagtttgaaatatttacctatgtaagataatgagtttttaa
gaaaaatctaaattagtttgataatagtttttccccctaatgcatgattc
ttagaatttacctgatgaagcatacttattttcttttcagtaatgaatct
aaatgtaatctacaatagcacataacaaaaacaaaaatacccaaaaatcc
caaaaacagaatttctgttttgtgagaataggatttctgttccaaaattt
aaaaatgaaattaaggacagaggcaattagaggaaaatatgagagttttc
taaatattagcagatcatggatgaaaaactgcttccaagtgcacagaatc
ctgttgtttgaaatttgccaacaagtgtgttcatgtcttaggtaaagcag
tctcatgacttctgtgcagaggagcctctcgcatttcaatttaaagtaat
ggtgtgagcaatttcactccattacttctgtctccaatagggttcacagc
atccatgctaatgtctaccgacaaaacatgagaagaacaatggcttctca
tttgtataatgggcttgagtgagatggtggttgttctcatggatgaatac
actaagtgattaaaataattgctagtacccagatatataggtagaatagc
aatgtaacaaagcatttttgtatcatggtgacgatctcttgcaggcacat
ggaaagcctcatcttgttgcacatttacctcaccacacgtctcacattat
tgatcataagtctgggctattttttaatctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51158706_51159237
seq2: B6Ng01-018D10.b_46_577 (reverse)

seq1  ATACCCCACCCACCACCTCACCTGACCTCTAAACTCCATGGGACCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCACCCACCACCTCACCTGACCTCTAAACTCCATGGGACCTCCAG  50

seq1  TCCCTTGAGGGTTAGGTGCACCATCTCTGAATGAACACAGACCCAGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGAGGGTTAGGTGCACCATCTCTGAATGAACACAGACCCAGAAAT  100

seq1  CCTCTACTGTATGTGTGATGGGGGCCTCGTATCAGCTGGTGTATGCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTGTATGTGTGATGGGGGCCTCGTATCAGCTGGTGTATGCTGTG  150

seq1  TGTTTGGTGATCCAGTGTCTGAAAGATCTCGGGGGTTCAGATTAATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTGATCCAGTGTCTGAAAGATCTCGGGGGTTCAGATTAATTAAG  200

seq1  ACCTCCTACAGGGTTGCCCTTCTTCTCAGAATTTTAGTTTTGAAAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTACAGGGTTGCCCTTCTTCTCAGAATTTTAGTTTTGAAAGGAGA  250

seq1  ATAATCTTTTAAGTCATCATTAATTTGCTGCTCAATACTATCAATATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTTAAGTCATCATTAATTTGCTGCTCAATACTATCAATATGAT  300

seq1  AAGGAAGAAAACTGCATCCACTAGATGATATCCTAGTTTTCCTTTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAAACTGCATCCACTAGATGATATCCTAGTTTTCCTTTTCCAG  350

seq1  AAATTTCTTGTGGAGACCCCTGTACTTATGCCCTTTTCCCAAGGGGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTGTGGAGACCCCTGTACTTATGCCCTTTTCCCAAGGGGACTC  400

seq1  GTCGGCTTTGTTCTGCCCATAGGATTGTTCACGTGGTCCTGGTGGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGCTTTGTTCTGCCCATAGGATTGTTCACGTGGTCCTGGTGGTAAAT  450

seq1  TCCCAAGAAATTACTCAGGTTTCCCTTCCCCTCCTACTATAATTTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGAAATTACTCAGGTTTCCCTTCCCCTCCTACTATAATTTCTTCT  500

seq1  CTGTGTTGTCTTCAGGTTCAGAGAGTGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  CTGTGTTGTCTTCAGGTTCAGAGAGTGAATTC  532

seq1: chr15_51051657_51052744
seq2: B6Ng01-018D10.g_69_1150

seq1  GAATTCAGTTTAGAGCTGACTGTCAACTGTCATTTAATTAGTAGGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTAGAGCTGACTGTCAACTGTCATTTAATTAGTAGGAGAGA  50

seq1  CCTTATGAAGCACAATTGGCACAATTATGTTACTTTTAAAAATAAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAGCACAATTGGCACAATTATGTTACTTTTAAAAATAAAAATT  100

seq1  GCTTCAACCTTTCTAATGCTTTGTAGCATGCCATCCCCACATCGCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACCTTTCTAATGCTTTGTAGCATGCCATCCCCACATCGCCTGGC  150

seq1  ACATTTATGATTTCTATAAGAACAAATGCAGAAACTGTCTTGAGGATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATGATTTCTATAAGAACAAATGCAGAAACTGTCTTGAGGATTGA  200

seq1  CACAGCCCATCTGCTTCAAATAGCTGCTATTGCAAAAATGCCATATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCATCTGCTTCAAATAGCTGCTATTGCAAAAATGCCATATTTTC  250

seq1  TCCTAACATTCTTTTACACAAAAGCAGACTGAAAAGAGCAGGTATTATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACATTCTTTTACACAAAAGCAGACTGAAAAGAGCAGGTATTATTA  300

seq1  AGAAATGATCAGTTTGAAATATTTACCTATGTAAGATAATGAGTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGATCAGTTTGAAATATTTACCTATGTAAGATAATGAGTTTTTAA  350

seq1  GAAAAATCTAAATTAGTTTGATAATAGTTTTTCCCCCTAATGCATGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCTAAATTAGTTTGATAATAGTTTTTCCCCCTAATGCATGATTC  400

seq1  TTAGAATTTACCTGATGAAGCATACTTATTTTCTTTTCAGTAATGAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTACCTGATGAAGCATACTTATTTTCTTTTCAGTAATGAATCT  450

seq1  AAATGTAATCTACAATAGCACATAACAAAAACAAAAATACCCAAAAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATCTACAATAGCACATAACAAAAACAAAAATACCCAAAAATCC  500

seq1  CAAAAACAGAATTTCTGTTTTGTGAGAATAGGATTTCTGTTCCAAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAGAATTTCTGTTTTGTGAGAATAGGATTTCTGTTCCAAAATTT  550

seq1  AAAAATGAAATTAAGGACAGAGGCAATTAGAGGAAAATATGAGAGTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAATTAAGGACAGAGGCAATTAGAGGAAAATATGAGAGTTTTC  600

seq1  TAAATATTAGCAGATCATGGATGAAAAACTGCTTCCAAGTGCACAGAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTAGCAGATCATGGATGAAAAACTGCTTCCAAGTGCACAGAATC  650

seq1  CTGTTGTTTGAAATTTGCCAACAAGTGTGTTCATGTCTTAGGTAAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTTGAAATTTGCCAACAAGTGTGTTCATGTCTTAGGTAAAGCAG  700

seq1  TCTCATGACTTCTGTGCAGAGGAGCCTCTCGCATTTCAATTTAAAGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGACTTCTGTGCAGAGGAGCCTCTCGCATTTCAATTTAAAGTAAT  750

seq1  GGTGTGAGCAATTTCACTCCATTACTTCTGTCTCCAATAGGGTTCACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAGCAATTTCACTCCATTACTTCTGTCTCCAATAGGGTTCACAGC  800

seq1  ATCCATGCTAATGTCTACCGACAAAACATGAGAAGAACAATGGCTTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCTAATGTCTACCGACAAAACATGAGAAGAACAATGGCTTCTCA  850

seq1  TTTGTATAATGGGCTTGAGTGAGATGGTGGTTGTTCTCATGGATGAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAATGGGCTTGAGTGAGATGGTGGTTGTTCTCATGGATGAATAC  900

seq1  ACTAAGTGATTAAAATAATTGCTAGTACCCAGATATATAAGGTAGAATAG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTAAGTGATTAAAATAATTGCTAGTACCCAGATATAT-AGGTAGAATAG  949

seq1  CAAATGTAACAAAAGCAATTTTGTATCATGTGGACGATCTCTTGCCAGGG  1000
      | |||||||| |||||| ||||||||||||  |||||||||||||   ||
seq2  C-AATGTAAC-AAAGCATTTTTGTATCATGGTGACGATCTCTTGC--AGG  995

seq1  CACATGGAAAG-CTCATTCTTGTTGCACATTTACCTCACCACACGTCTCA  1049
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  CACATGGAAAGCCTCA-TCTTGTTGCACATTTACCTCACCACACGTCTCA  1044

seq1  CATATCTGAATCACTAAGTCTGGGCTA-TTTTTAATCTAA  1088
      ||| | |  |||| ||||||||||||| ||||||||||||
seq2  CAT-TATTGATCA-TAAGTCTGGGCTATTTTTTAATCTAA  1082