BAC Information

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BAC

Clone NameB6Ng01-019G22
Chromosome15 (Build37)
Map Location 11,484,488 - 11,670,563
singlet/doubletdoublet
Overlap geneLOC100039772
Upstream gene4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12, Tars
Downstream geneNpr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G22.bB6Ng01-019G22.g
ACCDH852518DH852519
length230972
definitionDH852518|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G22, 5' end.DH852519|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,670,334 - 11,670,563)(11,484,488 - 11,485,211)
sequence
gaattcagaaagtatttatcgagtgtgtttgcatgcaaaggaccaattaa
atagaataaagattaacaagatacgttcagattgattttttttttaaaaa
gcaattagctgattccaaagacgatacagaaaagacttacaaagtatttg
aacaattgcaagatcgttggggtaggtgtcctctccacggtgtgtgagtg
tatgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcctgatcatctccctacaactcccatgtgctggcattattggcat
gtatcactcaccagttatggctcctttttaaaaaggaactgtcttttgca
gtggttgcaggtagaaggacaggttaatttctgagacctcgtcaaagaat
aagaaatatatatgatgggtgacatgggccaacttctctcagtaaattgt
actgcctttgaattttaatctaaatgacaggaaagactttctgaacagaa
cactgatcacacaggcaccgaggctaacagttaactcatgggatctcacg
ggaaggagaagcttccccgtggcaaaagacaccgccattcggatgagtcg
ccaggctacagaatgggggaaaactgtaccaattacatacctgagagagg
gctcatatctaaaaaactggacaccaagacaacaaaccaattttaaaaat
agggtacagatctaaggggggattctcagaagaggaaactaaaataggta
agatgcagttaaagaaatgttcaacatttatcaaggaaattgtgaaacaa
tacttcattaagattatatatcatggcaatcagaagaaacaataccaata
aaataaatgacagctcatcctgacaaggatgtggaataggggaaacattt
atccattgctggtgggagggcagacttaaacaatcattatggcaatcggt
gtgatgggtcctcaggaaaatgggaattgatctacctcaagatccagtta
tatcacttttgttcatatactcaaagaatgcttcatcttaacacagagac
attttgctcaaccgtgttcatttcagatgtactttataattgccagaaac
tggaaacaagtaatgtctatcaacaaatgaatgtatccagaaaatgcggt
acttccccattgaatattactcaaccatttaaaataataataaattttgt
aactaaatagttggaagtagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_11670334_11670563
seq2: B6Ng01-019G22.b_42_271 (reverse)

seq1  CACACACACACACACACACACACACACATACACTCACACACCGTGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACATACACTCACACACCGTGGAGAG  50

seq1  GACACCTACCCCAACGATCTTGCAATTGTTCAAATACTTTGTAAGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTACCCCAACGATCTTGCAATTGTTCAAATACTTTGTAAGTCTTT  100

seq1  TCTGTATCGTCTTTGGAATCAGCTAATTGCTTTTTAAAAAAAAAATCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCGTCTTTGGAATCAGCTAATTGCTTTTTAAAAAAAAAATCAAT  150

seq1  CTGAACGTATCTTGTTAATCTTTATTCTATTTAATTGGTCCTTTGCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGTATCTTGTTAATCTTTATTCTATTTAATTGGTCCTTTGCATGC  200

seq1  AAACACACTCGATAAATACTTTCTGAATTC  230
      ||||||||||||||||||||||||||||||
seq2  AAACACACTCGATAAATACTTTCTGAATTC  230

seq1: chr15_11484488_11485211
seq2: B6Ng01-019G22.g_67_790

seq1  GAATTCCTGATCATCTCCCTACAACTCCCATGTGCTGGCATTATTGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCATCTCCCTACAACTCCCATGTGCTGGCATTATTGGCAT  50

seq1  GTATCACTCACCAGTTATGGCTCCTTTTTAAAAAGGAACTGTCTTTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACTCACCAGTTATGGCTCCTTTTTAAAAAGGAACTGTCTTTTGCA  100

seq1  GTGGTTGCAGGTAGAAGGACAGGTTAATTTCTGAGACCTCGTCAAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCAGGTAGAAGGACAGGTTAATTTCTGAGACCTCGTCAAAGAAT  150

seq1  AAGAAATATATATGATGGGTGACATGGGCCAACTTCTCTCAGTAAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATATATGATGGGTGACATGGGCCAACTTCTCTCAGTAAATTGT  200

seq1  ACTGCCTTTGAATTTTAATCTAAATGACAGGAAAGACTTTCTGAACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTTGAATTTTAATCTAAATGACAGGAAAGACTTTCTGAACAGAA  250

seq1  CACTGATCACACAGGCACCGAGGCTAACAGTTAACTCATGGGATCTCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATCACACAGGCACCGAGGCTAACAGTTAACTCATGGGATCTCACG  300

seq1  GGAAGGAGAAGCTTCCCCGTGGCAAAAGACACCGCCATTCGGATGAGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGAAGCTTCCCCGTGGCAAAAGACACCGCCATTCGGATGAGTCG  350

seq1  CCAGGCTACAGAATGGGGGAAAACTGTACCAATTACATACCTGAGAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTACAGAATGGGGGAAAACTGTACCAATTACATACCTGAGAGAGG  400

seq1  GCTCATATCTAAAAAACTGGACACCAAGACAACAAACCAATTTTAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATCTAAAAAACTGGACACCAAGACAACAAACCAATTTTAAAAAT  450

seq1  AGGGTACAGATCTAAGGGGGGATTCTCAGAAGAGGAAACTAAAATAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACAGATCTAAGGGGGGATTCTCAGAAGAGGAAACTAAAATAGGTA  500

seq1  AGATGCAGTTAAAGAAATGTTCAACATTTATCAAGGAAATTGTGAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGTTAAAGAAATGTTCAACATTTATCAAGGAAATTGTGAAACAA  550

seq1  TACTTCATTAAGATTATATATCATGGCAATCAGAAGAAACAATACCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATTAAGATTATATATCATGGCAATCAGAAGAAACAATACCAATA  600

seq1  AAATAAATGACAGCTCATCCTGACAAGGATGTGGAATAGGGGAAACATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGACAGCTCATCCTGACAAGGATGTGGAATAGGGGAAACATTT  650

seq1  ATCCATTGCTGGTGGGAGGGCAGACTTAAACAATCATTATGGCAATCGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGCTGGTGGGAGGGCAGACTTAAACAATCATTATGGCAATCGGT  700

seq1  GTGATGGGTCCTCAGGAAAATGGG  724
      ||||||||||||||||||||||||
seq2  GTGATGGGTCCTCAGGAAAATGGG  724