BAC Information

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BAC

Clone NameB6Ng01-019M10
Chromosome15 (Build37)Y (Build37)
Map Location 63,972,482 - 63,973,6661,870,346 - 1,870,556
singlet/doubletsingletsinglet
Overlap geneDdef1
Upstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik
Downstream geneAdcy8, LOC268812
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M10.bB6Ng01-019M10.g
ACCDH852766DH852767
length1,171494
definitionDH852766|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M10, 5' end.DH852767|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(63,972,482 - 63,973,666)(1,870,346 - 1,870,556)
sequence
gaattcagtattagctgcgcatagacaagtcagccagcgtcctctcttct
cattgctaagtactcactggcttcaaagtatctgctggacagcttcacat
aagggctgaacccgtttactccactagcaataatacttgggtgatattta
tcctacagaatggtcaggctgcggcgtcaacacgaacctcaagtgacagg
gacacatcctgcctataccacacatattctcccccaggctgaactgcaat
aggtgtagcaaacaaagcagctgctacccaatgctgagcagagggacatg
agaaaaaggcttagggacggacgggcctggggaatgttctactcaagtcc
gaagagctttagcagaagcacagaaattagcaataatggtaattctagct
gtttgtttaagttacgaaatttcaaaaccactcttgacatttagactaaa
ttataggtatattgatgaaagacgacaatctttccacagattaaaatgag
agcaaaactaaacaacttggcccagctgcatcgtggtggggcagtccagg
aagtaaagtatgtatatactgtccccttcccactcgaacccctccacatc
tttctttccggtgtctagaggccgtggttcctgagccagcagccttcctc
tcacacaagccgcccatctctatggctgttttcctttcaaacaatggtgt
gcttcgtgcttactaaactatgccatgtatacagcaagcactcaaatatc
aatcaaagtcctaccttccaagaacacagtaaatacttcctgtacattcg
aagaaatgcttttagtttcctttactagacaacatgagggagagagatgc
taatgaccttccccagcatgctgagtaagccagtggctgaggggaccaga
gcccccactcttccctacaccaccgtgcagccagcagggaaaggcagaaa
tagcggcagcctcaggagtggctgcgtatctgattccacccaaattccta
agtcagctggatgaagaaaaatttcagaaggtgaatagtttctccattca
tttggtactaaagttcttccacggtctttatgctccgaaagcacccgcgc
accagctctagaaaactgaattatctggagcgctctgccggcgttccgaa
tgtgttggctttaagcttgag
tttaccctttcttagaaatgggaacaaaacacccatagaaggagttacag
agacaaaatttggagctgtgacgaaaggatggaccatctagtgattgcca
tatgcagggatccatcccataatcagcttccaaatgctgacaccattgca
tacactagcaagattttgctgaaaggacccagatatagctctctcttgtg
agactatgccggggcctagcaaacacagaagtggatgatcacagtcagct
attggatgggtcacacggccccttatggaggagctagagaaattacccaa
ggagctatagggaactgcaaccctataggtggaacaacaatatgaactaa
ccagtacccgggagctcttgtctttagctgcatatgtatcaaaagatggc
ctagtcggtcatcactgcaaagagaggcccattggacttgcaaactttat
atggaccagtacaggggaacgccagggccaaaaaggggcagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63972482_63973666
seq2: B6Ng01-019M10.b_45_1215

seq1  GAATTCAGTATTAGCTGCGCATAGACAAGTCAGCCAGCGTCCTCTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTAGCTGCGCATAGACAAGTCAGCCAGCGTCCTCTCTTCT  50

seq1  CATTGCTAAGTACTCACTGGCTTCAAAGTATCTGCTGGACAGCTTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTAAGTACTCACTGGCTTCAAAGTATCTGCTGGACAGCTTCACAT  100

seq1  AAGGGCTGAACCCGTTTACTCCACTAGCAATAATACTTGGGTGATATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTGAACCCGTTTACTCCACTAGCAATAATACTTGGGTGATATTTA  150

seq1  TCCTACAGAATGGTCAGGCTGCGGCGTCAACACGAACCTCAAGTGACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAGAATGGTCAGGCTGCGGCGTCAACACGAACCTCAAGTGACAGG  200

seq1  GACACATCCTGCCTATACCACACATATTCTCCCCCAGGCTGAACTGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATCCTGCCTATACCACACATATTCTCCCCCAGGCTGAACTGCAAT  250

seq1  AGGTGTAGCAAACAAAGCAGCTGCTACCCAATGCTGAGCAGAGGGACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAGCAAACAAAGCAGCTGCTACCCAATGCTGAGCAGAGGGACATG  300

seq1  AGAAAAAGGCTTAGGGACGGACGGGCCTGGGGAATGTTCTACTCAAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGGCTTAGGGACGGACGGGCCTGGGGAATGTTCTACTCAAGTCC  350

seq1  GAAGAGCTTTAGCAGAAGCACAGAAATTAGCAATAATGGTAATTCTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTTTAGCAGAAGCACAGAAATTAGCAATAATGGTAATTCTAGCT  400

seq1  GTTTGTTTAAGTTACGAAATTTCAAAACCACTCTTGACATTTAGACTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTAAGTTACGAAATTTCAAAACCACTCTTGACATTTAGACTAAA  450

seq1  TTATAGGTATATTGATGAAAGACGACAATCTTTCCACAGATTAAAATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGTATATTGATGAAAGACGACAATCTTTCCACAGATTAAAATGAG  500

seq1  AGCAAAACTAAACAACTTGGCCCAGCTGCATCGTGGTGGGGCAGTCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACTAAACAACTTGGCCCAGCTGCATCGTGGTGGGGCAGTCCAGG  550

seq1  AAGTAAAGTATGTATATACTGTCCCCTTCCCACTCGAACCCCTCCACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGTATGTATATACTGTCCCCTTCCCACTCGAACCCCTCCACATC  600

seq1  TTTCTTTCCGGTGTCTAGAGGCCGTGGTTCCTGAGCCAGCAGCCTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCGGTGTCTAGAGGCCGTGGTTCCTGAGCCAGCAGCCTTCCTC  650

seq1  TCACACAAGCCGCCCATCTCTATGGCTGTTTTCCTTTCAAACAATGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAGCCGCCCATCTCTATGGCTGTTTTCCTTTCAAACAATGGTGT  700

seq1  GCTTCGTGCTTACTAAACTATGCCATGTATACAGCAAGCACTCAAATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGTGCTTACTAAACTATGCCATGTATACAGCAAGCACTCAAATATC  750

seq1  AATCAAAGTCCTACCTTCCAAGAACACAGTAAATACTTCCTGTACATTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGTCCTACCTTCCAAGAACACAGTAAATACTTCCTGTACATTCG  800

seq1  AAGAAATGCTTTTAGTTTCCTTTACTAGACAACATGAGGGAGAGAGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGCTTTTAGTTTCCTTTACTAGACAACATGAGGGAGAGAGATGC  850

seq1  TAATGACCTTCCCCAGCATGCTGAGTAAGCCAGTGGCTGAGGGGACCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACCTTCCCCAGCATGCTGAGTAAGCCAGTGGCTGAGGGGACCAGA  900

seq1  GCCCCCACTCTTCCCTACACCACCGTGCAGGCCAGCAGGGAAAGGCAGAA  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCCCCACTCTTCCCTACACCACCGTGCA-GCCAGCAGGGAAAGGCAGAA  949

seq1  ATAGCGGCAGCCCTCAGGGAGTGGCTGCGTATCTGATTCCCACCCAAATT  1000
      |||||||||| ||||| ||||||||||||||||||||| |||||||||||
seq2  ATAGCGGCAG-CCTCA-GGAGTGGCTGCGTATCTGATT-CCACCCAAATT  996

seq1  CCTAAGTCAGCTGGATGAAGAGACATTTCAGAAGGTGAAATAGTTTCT-C  1049
      ||||||||||||||||||||| | ||||||||||||| |||||||||| |
seq2  CCTAAGTCAGCTGGATGAAGAAAAATTTCAGAAGGTG-AATAGTTTCTCC  1045

seq1  ATTCATTTGGTTACTAAAGGTTCTTCCAC-GTCTTTAAGTGCTCGTGAAA  1098
      |||||||||| ||||||| |||||||||| |||||||  |||||    ||
seq2  ATTCATTTGG-TACTAAA-GTTCTTCCACGGTCTTTA--TGCTC--CGAA  1089

seq1  AGCACCGCTGTCACCAGCTCTAGGAAAAGCTG-ATTATCTGAGAGCCCGT  1147
      |||||| |   ||||||||||||  ||| ||| |||||||| |||| | |
seq2  AGCACC-CGCGCACCAGCTCTAG--AAAACTGAATTATCTG-GAGCGC-T  1134

seq1  CTGCCGGCTGTTCAGGA-GTGTTGGGTCTGAGGCTTGAG  1185
      |||||||| |||| | | ||||||| | | | |||||||
seq2  CTGCCGGC-GTTCCGAATGTGTTGGCT-TTAAGCTTGAG  1171

seq1: chrY_1870346_1870556
seq2: B6Ng01-019M10.g_359_569

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||| |||||||||||||| ||||| |||||||||||||||||||
seq2  CTAGAGAAATTACCCAAGGAGCTATAGGGAACTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| ||||||||||||| |||||  ||||||||| || | |||||||
seq2  ACAACAATATGAACTAACCAGTACCCGGGAGCTCTTGTCTTTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGTCATCACTGCAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      |||| |||||||||||||||  ||||||||||||||||||||||||||||
seq2  GGACTTGCAAACTTTATATGGACCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGG  211
      |||||||||||
seq2  AGGGGCAGTGG  211