BAC Information

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BAC

Clone NameB6Ng01-020F01
Chromosome15 (Build37)
Map Location 4,745,961 - 4,746,682
singlet/doubletsinglet
Overlap geneC6
Upstream geneFbxo4, AW549877, LOC100039196, Oxct1, Plcxd3
Downstream geneLOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F01.bB6Ng01-020F01.g
ACCDH853149DH853150
length1,188933
definitionDH853149|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F01, 5' end.DH853150|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcatatattggatattagccctttatcggatgtaggattag
taaagatcttttcccaacctgttggttgccttttaatcctattgacagtg
tcctttgccttacagaagctttgcaattttatgaggtcccatttctctct
tgatcttagagcataagctgttggtgttctgttcaggaacatttccccgg
tgcccatgtgctcgaggctcttccccactttcttttctatttgtttcagt
gtatctggttttatgtggaggtccttgatccatttggacttgagttttgt
ataaggagataagaatagatttgtttcattcttctacatgctatccacca
gttgaactagcaccatttgttgaaaatgctgtcttttttccccttggatg
gttttagctcctttgtcaaagatcaagtgaccataggtgtgtgggttcat
ttctgtgtcttcaattctattccattgatcttcctgcatgtcactgtatg
aataccatgcacgattttatcataattgttctataatacagcttgaggtc
agggatggtgattccccctgaagttcttttattgttgagaatagtttcac
tatccaggtatcaaaatacccatggaaggatatgcagtcacaaagcttcg
agcagaacctgaaggaaggccatccagtgactgtcccaccaggatataca
tcctatatgcagttcacaaacccagacactattgtgaatgcgaacaagtg
cttgctgacaggagcctgatatggctgtctcctgagaggctctgccagta
cctgacaaatacagaattggaggctcacagccattcattggactgagcac
agggtcctcaatggagaagctagagaaagtacccaaggaggtgaaaggat
ttgcagtcccatagaggaacacaatatgaccaccagtaccccgtagttcc
cagactaaaccaccaatcaagagataaggaggattcaagcacatactatg
tgtgcttcagctgccatgtagcaaggattgcttggtggacatcaatgaaa
gagaggcctgaacttctgaagctggatactcaccgtatggaatgcagcca
gatgggagtagatatgttagtagctcagaggggaaataaataatgtttca
acgtaatatgacagagaaaggaatagttgatgcatata
gaattcatttttctgccttaaactaattatactttttgtactggaatttc
cttctgcttttgagtatgatagtacatgcctttaatcacagtattttgga
ggcagaggtagtagaactctatgtgtttaaatccagccaagactacacaa
tgggactagtatgccttacacgttacagacaggttgcactttctacccga
gctttttgtgcttctggggtctgtggagagctgagcaagccttcttgggc
tcttgcacccatggacaaaaccaaaaccaaacagatggcaaaacttcctc
cttagggcttgctgtgtaagcacatcgacctgattttcaatcttccccag
caatgtaaaatccagatgtggtgacaacatctgtaacttgagcattggtg
gtgggcagagacaggagaatttctggggctttctgggcactcagtctagc
cactgagtctagtctagtctagtctagtctagtctagtctagtctagtct
agtctagtctcagtcctggttgagtgagagatcttgtctcaaaaacaatg
aagaagaaagcaacagaagagggcatttaaagttgtcgtcaggcccccat
gcacacctgtatatacacatgcacaaatgtgcacatagatataaaataca
caaacacacacacacacacacacacacacacacacacacactcaaccaaa
caaaaccctatgtgatgatgcctcctgttatgggttgactgtgagacatt
ccttgcaggtttatgtgtttgaacacttgtttcctatacagtggtactgg
gatgggaggttcagaaaccttaaagaaatggagtgtagtgggaggaagtg
tgctcctggggttcagccttagaccttatagccggttcacactttccacc
tgggctctgtgtgcttcctagtctgtgagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_4745961_4746682
seq2: B6Ng01-020F01.g_64_785 (reverse)

seq1  GGCATCATCACATAGGGTTTTGTTTGGTTGAGTGTGTGTGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCATCACATAGGGTTTTGTTTGGTTGAGTGTGTGTGTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGTGTGTTTGTGTATTTTATATCTATGTGCACATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTTTGTGTATTTTATATCTATGTGCACATTTGT  100

seq1  GCATGTGTATATACAGGTGTGCATGGGGGCCTGACGACAACTTTAAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTATATACAGGTGTGCATGGGGGCCTGACGACAACTTTAAATGC  150

seq1  CCTCTTCTGTTGCTTTCTTCTTCATTGTTTTTGAGACAAGATCTCTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTGTTGCTTTCTTCTTCATTGTTTTTGAGACAAGATCTCTCACT  200

seq1  CAACCAGGACTGAGACTAGACTAGACTAGACTAGACTAGACTAGACTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGACTGAGACTAGACTAGACTAGACTAGACTAGACTAGACTAGA  250

seq1  CTAGACTAGACTAGACTCAGTGGCTAGACTGAGTGCCCAGAAAGCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTAGACTAGACTCAGTGGCTAGACTGAGTGCCCAGAAAGCCCCAG  300

seq1  AAATTCTCCTGTCTCTGCCCACCACCAATGCTCAAGTTACAGATGTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCCTGTCTCTGCCCACCACCAATGCTCAAGTTACAGATGTTGTC  350

seq1  ACCACATCTGGATTTTACATTGCTGGGGAAGATTGAAAATCAGGTCGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATCTGGATTTTACATTGCTGGGGAAGATTGAAAATCAGGTCGATG  400

seq1  TGCTTACACAGCAAGCCCTAAGGAGGAAGTTTTGCCATCTGTTTGGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACACAGCAAGCCCTAAGGAGGAAGTTTTGCCATCTGTTTGGTTTT  450

seq1  GGTTTTGTCCATGGGTGCAAGAGCCCAAGAAGGCTTGCTCAGCTCTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTCCATGGGTGCAAGAGCCCAAGAAGGCTTGCTCAGCTCTCCAC  500

seq1  AGACCCCAGAAGCACAAAAAGCTCGGGTAGAAAGTGCAACCTGTCTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCAGAAGCACAAAAAGCTCGGGTAGAAAGTGCAACCTGTCTGTAA  550

seq1  CGTGTAAGGCATACTAGTCCCATTGTGTAGTCTTGGCTGGATTTAAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAGGCATACTAGTCCCATTGTGTAGTCTTGGCTGGATTTAAACAC  600

seq1  ATAGAGTTCTACTACCTCTGCCTCCAAAATACTGTGATTAAAGGCATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTCTACTACCTCTGCCTCCAAAATACTGTGATTAAAGGCATGTA  650

seq1  CTATCATACTCAAAAGCAGAAGGAAATTCCAGTACAAAAAGTATAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATACTCAAAAGCAGAAGGAAATTCCAGTACAAAAAGTATAATTAG  700

seq1  TTTAAGGCAGAAAAATGAATTC  722
      ||||||||||||||||||||||
seq2  TTTAAGGCAGAAAAATGAATTC  722