BAC Information

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BAC

Clone NameB6Ng01-023P15
Chromosome15 (Build37)
Map Location 51,931,528 - 51,932,466
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720
Downstream geneLOC665219, Slc30a8, LOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023P15.bB6Ng01-023P15.g
ACCDH855748DH855749
length1,160938
definitionDH855748|Mus musculus domesticus DNA, BAC clone: B6Ng01-023P15, 5' end.DH855749|Mus musculus domesticus DNA, BAC clone: B6Ng01-023P15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtcccatacctaaacatgataaaagcaatctacaggaaacca
atagccagcatcaaagtaaatggtgagaagctagaagcaatcccactaaa
atcagggactacacaaggctgtccactctctccctacctatttaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaagtc
tgataaacagcttcaatcaagtaactggatataaaattaactcaaacaag
tcaatggcctttctgtgcacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaatattataaaataccttggcg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagttt
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacaaattagaaagggcaatcggtagattcatctggaataacaaaaatcc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctgtactacagagcaatttgtgataaaaactgc
atggtgctggtatagtgacagacaagtagaccaatggaacagaattaaag
acccagagatgacccacacacctatgggtcactttgatctttcgacaggg
agctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgct
ggcacactggtggttatctgaaaaatgcgaatcgatcatactttactcct
tgtctaagtcaatctagtggatcaaggaccttcccttaacctgagaacct
gaactttatagggaaaggtgggaaagcccttaaatttgtgctcatggaca
attcctgataaaacgcaggcttgtgctgtaatcgaaaatgcaaaagggac
tctatgtact
gaattcttgtctaactttttcttatctagctattgatctttatctaattg
aaatgtcaggtgctttggtgtttttttttttgttgttgttgttttgtttt
ttgttttgttttgttttgttttagggcctctcttgctttggccatattta
tttcatatatgtgggcacactgcagaagatggcatcagatgcgcattaca
gatggttgtgagccaccacgtggttgctgggaattgaactcagggcctct
ggaagagcagtcaatgctcttaactgctgagccatctctccagccctcta
caaacttctaatgcttctgcttatactgcccccaccacttttctttatgc
atgtctttatctatttgaccttctttccaaacttgtccagacagtgcatt
ctttttaagaaatgaagatttttttcccccacatcccctgcaggtcccag
gctaccacgagttctctcttgaccaacccatatgtattacacaatgacat
gtgaccttctgaggtatgttgtttgctctgtgtttatctggtagccgtga
ccccttgagagtttgatactatgcatggatctgtggctccaacccagtaa
caccaagtttagaaatgtgtctagatttttcttttatcagaataagaatg
cgaaaggagaactcctaaacctgataaacagcttcggtgaagtagctgga
tataaaataaactcaaacaagtcaatggcctttctctatacaaagaataa
acagggctgagaaagaaaattagggaaacacacccttctcaatagtcaca
aataatataaaatatcttggcgtactctaactaggaggtgaaagatctgt
atgaaaaaaactttcaatctctgaagaaagaattgaagtagatctcagaa
atatgcaaagactccatgctcttggattggcaggatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51931528_51932466
seq2: B6Ng01-023P15.g_71_1008

seq1  GAATTCTTGTCTAACTTTTTCTTATCTAGCTATTGATCTTTATCTAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTAACTTTTTCTTATCTAGCTATTGATCTTTATCTAATTG  50

seq1  AAATGTCAGGTGCTTTGGTGTTTTTTTTTTTGTTGTTGTTGTTTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAGGTGCTTTGGTGTTTTTTTTTTTGTTGTTGTTGTTTTGTTTT  100

seq1  TTGTTTTGTTTTGTTTTGTTTTAGGGCCTCTCTTGCTTTGGCCATATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTGTTTTAGGGCCTCTCTTGCTTTGGCCATATTTA  150

seq1  TTTCATATATGTGGGCACACTGCAGAAGATGGCATCAGATGCGCATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATATGTGGGCACACTGCAGAAGATGGCATCAGATGCGCATTACA  200

seq1  GATGGTTGTGAGCCACCACGTGGTTGCTGGGAATTGAACTCAGGGCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTGAGCCACCACGTGGTTGCTGGGAATTGAACTCAGGGCCTCT  250

seq1  GGAAGAGCAGTCAATGCTCTTAACTGCTGAGCCATCTCTCCAGCCCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCAATGCTCTTAACTGCTGAGCCATCTCTCCAGCCCTCTA  300

seq1  CAAACTTCTAATGCTTCTGCTTATACTGCCCCCACCACTTTTCTTTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCTAATGCTTCTGCTTATACTGCCCCCACCACTTTTCTTTATGC  350

seq1  ATGTCTTTATCTATTTGACCTTCTTTCCAAACTTGTCCAGACAGTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTATCTATTTGACCTTCTTTCCAAACTTGTCCAGACAGTGCATT  400

seq1  CTTTTTAAGAAATGAAGATTTTTTTCCCCCACATCCCCTGCAGGTCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAGAAATGAAGATTTTTTTCCCCCACATCCCCTGCAGGTCCCAG  450

seq1  GCTACCACGAGTTCTCTCTTGACCAACCCATATGTATTACACAATGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCACGAGTTCTCTCTTGACCAACCCATATGTATTACACAATGACAT  500

seq1  GTGACCTTCTGAGGTATGTTGTTTGCTCTGTGTTTACCTGGTAGCCGTGA  550
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTGACCTTCTGAGGTATGTTGTTTGCTCTGTGTTTATCTGGTAGCCGTGA  550

seq1  CCCCTTGAGAGTTTGATACTATGCATGGATCTGTGGCTCCAACCCAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGAGAGTTTGATACTATGCATGGATCTGTGGCTCCAACCCAGTAA  600

seq1  CACCAAGTTTAGAAATGTGTCTAGA-TTTTCTTTTATCAGAATAAGAATG  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CACCAAGTTTAGAAATGTGTCTAGATTTTTCTTTTATCAGAATAAGAATG  650

seq1  CGAAAGGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGA  700

seq1  TATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAA  750

seq1  ACA-GGCTGAGAAAG-AAATTAGGGAAACAACACCCTTCTCAATAGTCAC  797
      ||| ||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  ACAGGGCTGAGAAAGAAAATTAGGGAAAC-ACACCCTTCTCAATAGTCAC  799

seq1  AAATAATATAAAATATCTTGGCGTGACTCTAACTAAGGAGGTGAAAGATC  847
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  AAATAATATAAAATATCTTGGCGT-ACTCTAACT-AGGAGGTGAAAGATC  847

seq1  TGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATTGAAGAAGATCTC  897
      ||||||| ||||||||  ||||||||||||||| |||||||| |||||||
seq2  TGTATGAAAAAAACTTTCAATCTCTGAAGAAAG-AATTGAAGTAGATCTC  896

seq1  AG-AAGATGGAAAGACTCCCATGCTCATGGATTGGCAGGATCA  939
      || || ||| ||||||| |||||||| ||||||||||||||||
seq2  AGAAATATGCAAAGACT-CCATGCTCTTGGATTGGCAGGATCA  938