BAC Information

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BAC

Clone NameB6Ng01-024K08
Chromosome15 (Build37)
Map Location 17,118,282 - 17,119,362
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC624183, LOC100040119, Cdh9
Downstream geneLOC100040162, LOC666835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024K08.bB6Ng01-024K08.g
ACCDH856218DH856219
length1,1721,068
definitionDH856218|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K08, 5' end.DH856219|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtttgatgtcaaattctttacaaaataaaataaaa
tttttgctagaataggatgccccgttatctgtctggcaatcccatggcat
taaaggcttgtaggcaatgatcaattacatttttggaggcttctccagta
tgcagagaagcaaaaagcaatcctgaacaagtgtcaatacaaacatgtat
atattttaattttccaaattctgcatactgagttacatccacttgccaaa
tatgattaggcataagacctcatgggttgactcctaaatgtggcactgga
gaaaatgtaatacatttaggacattgttttacaatcattcttgcctgctc
cttaatgatcttatttcagagacttaaggtatggctagagagatgaaatt
tttcatgatcacgtttggccaaagcaacaggatctgaaattaaggcttct
cctattagagctctgtcgatacaatcattgccttcagctaaaggtccagg
aagaccagaatgcgatcatatgtggccaatatagaaggagtgttttcagg
caagaatgatgttttgcaattgtgaaaacagggatccttctggtgtatta
aggttaaatgtaccacaggtctccaataagggtaccaattgtgcaacata
taaactatcagtaataatatcaaaagcctcattcacagactgaaagaaat
tcagtactgctgttcattctgctaattgagctgagaggccaggagtcttt
atgattacctgttcattatttataagaaatccagctagtcctttagagga
gccatcagtaaacaccagaactgcattgtgtaagggttgtaaagagatca
tattagaaatatcacctcatgtacattcaaaaattttatcaacctatctt
gaagggtagtgggctgttatattcctttaaaccctatttgagcaagcaac
catctttactgtggctgtttcagccaagcgtcttacttatgctgtaaggc
tgacataatactgggctctttgccaaatatttactgcctgcttccttcca
ggaaaacacctagcttctgcttctaataggcagaattcattaagaaaaac
ctcatgtatcccattaaagaatttttgctttacgtccctagtatatagat
cgattaaaattaccgggagtca
gaattctctggtagagatattgcagttttatattaaaatgttgaaaataa
aaaaaagtttgggtatattacttgtagtgagtgaaaagaattagttcctt
catatagacttttaactcaagctactaggtcagttatcccataaggacac
agagttggctatgactcttgacattcattagtgagttgtgaagcaaagct
ataacaataaacaaaaatatattatttaaatagtggataatctttattaa
tgaaatatttctgctgaggtttgcaatgtgaattatattcctcagaatgt
aaataaatttgtttcatacgtatgtatatgtaatataaactactaaaacc
aatattttttctaaataatcaatgagaaaaatcttaatttataatgttca
taatatgtatttttgacaaaatcttaatttctatacaaaatattatggtt
aactatgacgtaggtcataaaataattatgattatggttattatagagac
ctgtaagatactggtgatcattctttcccattaaaaaacatatttttctg
ttcaaaaggactgatcagtcttttacttctgaggtctttgttataattta
tttttatttaggtattttcttcatttacatttcaaaagctatcccaaaag
tcgcccataccctcctccccactcccctacacacccactcccacttcttg
ggcatggcgttcccctgtactgaggcagataaagtttgcaagaccaaggg
aacactcttcccaatgatggcccactaggccatcttctgatacatatgca
gctaaagacatgagctccaggggtactggttagttcatattgttgttcca
cctatagagttgcagaccccttagctccttgagtactttctctagctcct
tcattgagggccctgtgttccatccaatagctgactgtgagcatccattc
tctgtttgacaggccctgcataggctcacagagacagctatatcaggtcc
tttcaacaaatctgctggcatatgtatgtgatgtgtctgctttggagctg
atataggatggtccctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_17118282_17119362
seq2: B6Ng01-024K08.g_68_1135 (reverse)

seq1  CCAGGGGAACCATCCTATAATCAGCCTCCAAACGCAGACACCATCACATA  50
      ||||||  |||||||||| ||||| ||||||| ||||||| |||||||||
seq2  CCAGGG--ACCATCCTAT-ATCAG-CTCCAAA-GCAGACA-CATCACATA  44

seq1  CATATGCCAGCAAGATTTTGTTGAAAGGACCCTGATATAGCTGTCTCTTG  100
      ||||||||||| ||| ||||||||||||| ||||||||||||||||| ||
seq2  CATATGCCAGC-AGA-TTTGTTGAAAGGA-CCTGATATAGCTGTCTC-TG  90

seq1  TGAGGCTATGCCAGGGCTTGTCAAACAGAGAATTGGATGCTCACAGTCAG  150
      |||| ||||| |||||| |||||||||||||| |||||||||||||||||
seq2  TGAGCCTATG-CAGGGCCTGTCAAACAGAGAA-TGGATGCTCACAGTCAG  138

seq1  CTATTGGATGGAACACAGGGCCCTCAATGAAGGAGCTAGAGAAAGTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGATGGAACACAGGGCCCTCAATGAAGGAGCTAGAGAAAGTACTC  188

seq1  AAGGAGCTAAAGGGGTCTGCAACTCTATAGGTGGAACAACAATATGAACT  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCT-AAGGGGTCTGCAACTCTATAGGTGGAACAACAATATGAACT  237

seq1  AACCAGTACCCCTGGAGCTCATGTCTTTAGCTGCATATGTATCAGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTACCCCTGGAGCTCATGTCTTTAGCTGCATATGTATCAGAAGAT  287

seq1  GGCCTAGTGGGCCATCATTGGGAAGAGTGTTCCCTTGGTCTTGCAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGTGGGCCATCATTGGGAAGAGTGTTCCCTTGGTCTTGCAAACTT  337

seq1  TATCTGCCTCAGTACAGGGGAACGCCATGCCCAAGAAGTGGGAGTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCCTCAGTACAGGGGAACGCCATGCCCAAGAAGTGGGAGTGGGTG  387

seq1  TGTAGGGGAGTGGGGAGGAGGGTATGGGCGACTTTTGGGATAGCTTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGAGTGGGGAGGAGGGTATGGGCGACTTTTGGGATAGCTTTTGA  437

seq1  AATGTAAATGAAGAAAATACCTAAATAAAAATAAATTATAACAAAGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATGAAGAAAATACCTAAATAAAAATAAATTATAACAAAGACCT  487

seq1  CAGAAGTAAAAGACTGATCAGTCCTTTTGAACAGAAAAATATGTTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTAAAAGACTGATCAGTCCTTTTGAACAGAAAAATATGTTTTTTA  537

seq1  ATGGGAAAGAATGATCACCAGTATCTTACAGGTCTCTATAATAACCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAGAATGATCACCAGTATCTTACAGGTCTCTATAATAACCATAA  587

seq1  TCATAATTATTTTATGACCTACGTCATAGTTAACCATAATATTTTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTATTTTATGACCTACGTCATAGTTAACCATAATATTTTGTATA  637

seq1  GAAATTAAGATTTTGTCAAAAATACATATTATGAACATTATAAATTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAGATTTTGTCAAAAATACATATTATGAACATTATAAATTAAGA  687

seq1  TTTTTCTCATTGATTATTTAGAAAAAATATTGGTTTTAGTAGTTTATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCATTGATTATTTAGAAAAAATATTGGTTTTAGTAGTTTATATT  737

seq1  ACATATACATACGTATGAAACAAATTTATTTACATTCTGAGGAATATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACATACGTATGAAACAAATTTATTTACATTCTGAGGAATATAAT  787

seq1  TCACATTGCAAACCTCAGCAGAAATATTTCATTAATAAAGATTATCCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGCAAACCTCAGCAGAAATATTTCATTAATAAAGATTATCCACT  837

seq1  ATTTAAATAATATATTTTTGTTTATTGTTATAGCTTTGCTTCACAACTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAATATATTTTTGTTTATTGTTATAGCTTTGCTTCACAACTCA  887

seq1  CTAATGAATGTCAAGAGTCATAGCCAACTCTGTGTCCTTATGGGATAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAATGTCAAGAGTCATAGCCAACTCTGTGTCCTTATGGGATAACT  937

seq1  GACCTAGTAGCTTGAGTTAAAAGTCTATATGAAGGAACTAATTCTTTTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGTAGCTTGAGTTAAAAGTCTATATGAAGGAACTAATTCTTTTCA  987

seq1  CTCACTACAAGTAATATACCCAAACTTTTTTTTATTTTCAACATTTTAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTACAAGTAATATACCCAAACTTTTTTTTATTTTCAACATTTTAAT  1037

seq1  ATAAAACTGCAATATCTCTACCAGAGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  ATAAAACTGCAATATCTCTACCAGAGAATTC  1068