BAC Information

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BAC

Clone NameB6Ng01-024M15
Chromosome15 (Build37)
Map Location 72,382,686 - 72,487,974
singlet/doubletdoublet
Overlap gene1810044A24Rik
Upstream geneLOC100040847, Col22a1, Kcnk9
Downstream geneLOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024M15.bB6Ng01-024M15.g
ACCDH856317DH856318
length1,105620
definitionDH856317|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M15, 5' end.DH856318|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,486,862 - 72,487,974)(72,382,686 - 72,383,294)
sequence
gaattcattaaccaaatggagcatttgtacagccaatttataaaataaat
taaaagcagctctagtcagccaaaagaaggcgaggaatccagaggaattg
gtcaagtaggggaaattttgaaggcggcttctacctctctgcacccttct
tttctaacaggtgctatagtccaaggctcaaggaggagaggtcacattcg
tgaccagcaaaacccaatagaaattctagtccaaaacaatgttgcccagg
tgccaaggaactctgccttttcttgctttttctgggctgtggttttatgt
cctgaaattggtatgcagggacccctcagatatgggtgagtttccctgcc
ccaggagctctggccacacctattaaaacacacctatttaaaacaacaaa
acaagaactgtccacctctaggaaactagggcaaaccaagaactttgtag
cctactgggccaagttcaggtggctacaatgattctctggtgaggcaggt
gtctttgtgcctcagctggtaagctctgagagagggctatgatgcctctt
gcctcagtcatacctttggtggagcaaatacatacacagttgtcctagag
aatgaaggagtcttagacccttcctgccgttggtccttgcagggtctccc
tgaatagcactttacagctatatggtcttctaaagtttttgccatcagaa
gactcaggggtgccaggctagcaaggatcaccagtcatatctaaagccat
tgcttggctaagtttcttaggcaggaccacgccctgtgctggtgaccagc
agcacctggcaccacttgcctgatgtcagtggtaaagagacagagataca
gaaccatgctgtcaccctcagtgggctgaagaatcctctaactttttagg
gacctcgactgagccagagtggaattcatggcttcgacacagacagaact
tcaggctaagttgatgtgacaaagcagagacgaaacttgtgaaagctatt
ttaatgtagactgtaagaaaatagctagcaccttgggagcataattgaac
cactgagatctccgaaatcaagaaatacccaagcatgttggccccctcaa
ggaaa
gaattcaatgccacatatggtgcctcaaaaaatttccttgtcccccaggc
tatagtgtcatgtctgaggggcacttgcctattgctgtagttggagaagt
cccagtgaaggccatggaaggccactattattgtccctggttagtgagga
gccaagatatctgaaattaatacaatggttggtacttgaggctatggcag
gctgggaattgtgtcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttctccttcttcttcctattcttcttcatcccctccttctcctcc
tccatcatcagcatcatcatgcaggcacaggccacaagggtgaggccatg
ttatgatgagaagacataaagattgagaaggaagatggaagcctacagac
cctaccttgtacccaacaggtttcccaagcttttttgttgttactgcatt
atattcaaaagacacttagacaagtctgccaagtttggtgcttgatgcaa
agacatgaggtaataaaaaaaaaaaaggaaggttgcttagaactttttga
gacacaagaggcaatacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72486862_72487974
seq2: B6Ng01-024M15.b_43_1147 (reverse)

seq1  TTTCCTTGAGGGG--CCACATGCTTGGGTATTTCTTGATCTCTGAGATTC  48
      |||||||||||||  | |||||||||||||||||||||| || |||| ||
seq2  TTTCCTTGAGGGGGCCAACATGCTTGGGTATTTCTTGATTTCGGAGA-TC  49

seq1  TCTGGTGTTCACTTATGCTCCCAAGTGTGCCTAGCTATTGTCCTTACAGT  98
      || |  ||||| ||||||||||||| ||| ||||||||| | ||||||||
seq2  TCAGTGGTTCAATTATGCTCCCAAG-GTG-CTAGCTATT-TTCTTACAGT  96

seq1  CTACATTAAAAATAGCTTTCACAAAGTTTTCGTCTCTGCTTTGTCACATC  148
      ||||||| ||||||||||||||||   |||||||||||||||||||||||
seq2  CTACATT-AAAATAGCTTTCACAA--GTTTCGTCTCTGCTTTGTCACATC  143

seq1  AACTTAGCCTGAAGTTCTTGTCTGTGTCGAAGCCATGAATTCCACTCTGG  198
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACTTAGCCTGAAGTTC-TGTCTGTGTCGAAGCCATGAATTCCACTCTGG  192

seq1  CTTCAGTCGAGGTCCCTAAAAAGTTAGAGGAATTCTTCAGCCCACTGAGG  248
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  C-TCAGTCGAGGTCCCTAAAAAGTTAGAGG-ATTCTTCAGCCCACTGAGG  240

seq1  GTGACAGCATGGTTCTGTATCTCTGTCTCTTTACCACTGACATCAGGCAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCATGGTTCTGTATCTCTGTCTCTTTACCACTGACATCAGGCAA  290

seq1  GTGGTGCCAGGTGCTGCTGGTCACCAGCACAGGGCGTGGTCCTGCCTAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCCAGGTGCTGCTGGTCACCAGCACAGGGCGTGGTCCTGCCTAAG  340

seq1  AAACTTAGCCAAGCAATGGCTTTAGATATGACTGGTGATCCTTGCTAGCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGCCAAGCAATGGCTTTAGATATGACTGGTGATCCTTGCTAGCC  390

seq1  TGGCACCCCTGAGTCTTCTGATGGCAAAAACTTTAGAAGACCATATAGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCCCTGAGTCTTCTGATGGCAAAAACTTTAGAAGACCATATAGCT  440

seq1  GTAAAGTGCTATTCAGGGAGACCCTGCAAGGACCAACGGCAGGAAGGGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTGCTATTCAGGGAGACCCTGCAAGGACCAACGGCAGGAAGGGTC  490

seq1  TAAGACTCCTTCATTCTCTAGGACAACTGTGTATGTATTTGCTCCACCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTCCTTCATTCTCTAGGACAACTGTGTATGTATTTGCTCCACCAA  540

seq1  AGGTATGACTGAGGCAAGAGGCATCATAGCCCTCTCTCAGAGCTTACCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGACTGAGGCAAGAGGCATCATAGCCCTCTCTCAGAGCTTACCAG  590

seq1  CTGAGGCACAAAGACACCTGCCTCACCAGAGAATCATTGTAGCCACCTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCACAAAGACACCTGCCTCACCAGAGAATCATTGTAGCCACCTGA  640

seq1  ACTTGGCCCAGTAGGCTACAAAGTTCTTGGTTTGCCCTAGTTTCCTAGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCCAGTAGGCTACAAAGTTCTTGGTTTGCCCTAGTTTCCTAGAG  690

seq1  GTGGACAGTTCTTGTTTTGTTGTTTTAAATAGGTGTGTTTTAATAGGTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGTTCTTGTTTTGTTGTTTTAAATAGGTGTGTTTTAATAGGTGT  740

seq1  GGCCAGAGCTCCTGGGGCAGGGAAACTCACCCATATCTGAGGGGTCCCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGCTCCTGGGGCAGGGAAACTCACCCATATCTGAGGGGTCCCTG  790

seq1  CATACCAATTTCAGGACATAAAACCACAGCCCAGAAAAAGCAAGAAAAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAATTTCAGGACATAAAACCACAGCCCAGAAAAAGCAAGAAAAGG  840

seq1  CAGAGTTCCTTGGCACCTGGGCAACATTGTTTTGGACTAGAATTTCTATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCCTTGGCACCTGGGCAACATTGTTTTGGACTAGAATTTCTATT  890

seq1  GGGTTTTGCTGGTCACGAATGTGACCTCTCCTCCTTGAGCCTTGGACTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGCTGGTCACGAATGTGACCTCTCCTCCTTGAGCCTTGGACTAT  940

seq1  AGCACCTGTTAGAAAAGAAGGGTGCAGAGAGGTAGAAGCCGCCTTCAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGTTAGAAAAGAAGGGTGCAGAGAGGTAGAAGCCGCCTTCAAAA  990

seq1  TTTCCCCTACTTGACCAATTCCTCTGGATTCCTCGCCTTCTTTTGGCTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTACTTGACCAATTCCTCTGGATTCCTCGCCTTCTTTTGGCTGA  1040

seq1  CTAGAGCTGCTTTTAATTTATTTTATAAATTGGCTGTACAAATGCTCCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCTGCTTTTAATTTATTTTATAAATTGGCTGTACAAATGCTCCAT  1090

seq1  TTGGTTAATGAATTC  1113
      |||||||||||||||
seq2  TTGGTTAATGAATTC  1105

seq1: chr15_72382686_72383294
seq2: B6Ng01-024M15.g_69_688

seq1  GAATTCAATGCCACATATGGTGCCTCAAAAAATTTCCTTGTCCCCCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCACATATGGTGCCTCAAAAAATTTCCTTGTCCCCCAGGC  50

seq1  TATAGTGTCATGTCTGAGGGGCACTTGCCTATTGCTGTAGTTGGAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGTCATGTCTGAGGGGCACTTGCCTATTGCTGTAGTTGGAGAAGT  100

seq1  CCCAGTGAAGGCCATGGAAGGCCACTATTATTGTCCCTGGTTAGTGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGAAGGCCATGGAAGGCCACTATTATTGTCCCTGGTTAGTGAGGA  150

seq1  GCCAAGATATCTGAAATTAATACAATGGTTGGTACTTGAGGCTATGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGATATCTGAAATTAATACAATGGTTGGTACTTGAGGCTATGGCAG  200

seq1  GCTGGGAATTGTG---------TCTTCTTCTTCTTCTTCTTCTTCTTCTT  241
      |||||||||||||         ||||||||||||||||||||||||||||
seq2  GCTGGGAATTGTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  250

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  300

seq1  TCTTCTTCTCCTTCTTCTTCCTATTCTTCTTCATCCCCTCCTTCTCCTCC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTCCTTCTTCTTCCTATTCTTCTTCATCCCCTCCTTCTCCTCC  350

seq1  TCCATCATCAGCATCATCATGCAGGCACAGGCCACAAGGGTGAGGCCATG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATCAGCATCATCATGCAGGCACAGGCCACAAGGGTGAGGCCATG  400

seq1  TTATGATGAGAAGACATAAAGATTGAGAAGGAAGATGGAAGCCTACAGAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGAGAAGACATAAAGATTGAGAAGGAAGATGGAAGCCTACAGAC  450

seq1  CCTACCTTGTACCCAACAGGTTTCCCAAGCTTTTTTGTTGTTACTGCATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTTGTACCCAACAGGTTTCCCAAGCTTTTTTGTTGTTACTGCATT  500

seq1  AAATTCAAAAGACACTTAGACAAGTCTGCCAAGTTTGGTGC-TGATGCAA  540
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATTCAAAAGACACTTAGACAAGTCTGCCAAGTTTGGTGCTTGATGCAA  550

seq1  AGACATGAGGTAATAAAAAAAAAAAAGGAAGGTTGCTTAGAAC-TTTTGA  589
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGACATGAGGTAATAAAAAAAAAAAAGGAAGGTTGCTTAGAACTTTTTGA  600

seq1  GACACAAGAGGCAAGACAGT  609
      |||||||||||||| |||||
seq2  GACACAAGAGGCAATACAGT  620