BAC Information

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BAC

Clone NameB6Ng01-025H10
Chromosome15 (Build37)
Map Location 40,651,844 - 40,759,878
singlet/doubletdoublet
Overlap geneZfpm2
Upstream geneDpys, Lrp12, LOC100039130, LOC670013, LOC664872, Ppia-ps25
Downstream geneOxr1, Abra, EG432946
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025H10.bB6Ng01-025H10.g
ACCDH856806DH856807
length767565
definitionDH856806|Mus musculus domesticus DNA, BAC clone: B6Ng01-025H10, 5' end.DH856807|Mus musculus domesticus DNA, BAC clone: B6Ng01-025H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,651,844 - 40,652,610)(40,759,308 - 40,759,878)
sequence
gaattcaaagggaaagtgttgatcagccatatacctctaatcgcagaaga
gagtccagtttctgggaagtattgagaaatatcctggctcctctcagttt
atctcaaaagtgacagttttgaaaaaattagcaggttataggcaaaggaa
tgtttctgcctctctaattattattcatgcaaatcttctaagtagagaca
ggtagtgttaatattgtaatagactcctgagaaaatattttctcttcctc
ctcccttctccctcctcttcctgctttctccctctccttccttcattttc
tctcctccaatgcacttcattgtccttctccttttcctcctcctcctctt
ctttctcctcctcctccttccttttgtttccctcctttcttaagttgcat
cttgttatttagcaaagtctagccttgaacttgtaattctcccatttcag
cttccttagtgctggacttacaagtatgtgtcattgagcttggctatttt
tgctgtgtagaaaaaagttcaaagagaaaaataagatgaaggtataagag
agctttaataaatttttggaagaaatgttgataaagaatgatccagaaat
aactgaatagaacacctttatcctgacccagatcatagatctgagaacat
ttagtttacagatcatatgatggcaagcaataataaaattcttaacttgc
agataagaaaaaattccaaacaattttgacattttgggaaaatagtctat
ggaaaaatacaagataa
cagactagtagacatgcagtgtatctagcacagtgaactgtgctctgaaa
atagagaaaaatggtccccggggacaggacaatggactgagtggaaggag
gctttcataagcctggcaaagaagccaacatagaaccatattcgcatcta
cttttatttacttgttatttcttatcttatgagaaatctgtttttacaga
tttttacacagttcacaaggtacacagctgggttttgcaaaaggtctcaa
ggcccatgtttttaagagtgtgagcttatacagaaatacatgttactgca
gaacactctaagtgaaaactttggtgtggacagtcattcatgcttggagc
tcatctattagaaaaagacattttctaatctggtaaaaaagaaaagcatc
attgacactccctttgttgttgttgttgttgttgttgttgttttgttctg
ttatgttttgggagaattacaatttccaaagatgctctccccatgccccc
ctcaacacagttgatgtgcattgctattttttgggggtgtgtgtatttgt
cactgtcaatcaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40651844_40652610
seq2: B6Ng01-025H10.b_46_812

seq1  GAATTCAAAGGGAAAGTGTTGATCAGCCATATACCTCTAATCGCAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGGAAAGTGTTGATCAGCCATATACCTCTAATCGCAGAAGA  50

seq1  GAGTCCAGTTTCTGGGAAGTATTGAGAAATATCCTGGCTCCTCTCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCAGTTTCTGGGAAGTATTGAGAAATATCCTGGCTCCTCTCAGTTT  100

seq1  ATCTCAAAAGTGACAGTTTTGAAAAAATTAGCAGGTTATAGGCAAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAAGTGACAGTTTTGAAAAAATTAGCAGGTTATAGGCAAAGGAA  150

seq1  TGTTTCTGCCTCTCTAATTATTATTCATGCAAATCTTCTAAGTAGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGCCTCTCTAATTATTATTCATGCAAATCTTCTAAGTAGAGACA  200

seq1  GGTAGTGTTAATATTGTAATAGACTCCTGAGAAAATATTTTCTCTTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGTTAATATTGTAATAGACTCCTGAGAAAATATTTTCTCTTCCTC  250

seq1  CTCCCTTCTCCCTCCTCTTCCTGCTTTCTCCCTCTCCTTCCTTCATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCTCCCTCCTCTTCCTGCTTTCTCCCTCTCCTTCCTTCATTTTC  300

seq1  TCTCCTCCAATGCACTTCATTGTCCTTCTCCTTTTCCTCCTCCTCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCAATGCACTTCATTGTCCTTCTCCTTTTCCTCCTCCTCCTCTT  350

seq1  CTTTCTCCTCCTCCTCCTTCCTTTTGTTTCCCTCCTTTCTTAAGTTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTCCTCCTCCTTCCTTTTGTTTCCCTCCTTTCTTAAGTTGCAT  400

seq1  CTTGTTATTTAGCAAAGTCTAGCCTTGAACTTGTAATTCTCCCATTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATTTAGCAAAGTCTAGCCTTGAACTTGTAATTCTCCCATTTCAG  450

seq1  CTTCCTTAGTGCTGGACTTACAAGTATGTGTCATTGAGCTTGGCTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTAGTGCTGGACTTACAAGTATGTGTCATTGAGCTTGGCTATTTT  500

seq1  TGCTGTGTAGAAAAAAGTTCAAAGAGAAAAATAAGATGAAGGTATAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTAGAAAAAAGTTCAAAGAGAAAAATAAGATGAAGGTATAAGAG  550

seq1  AGCTTTAATAAATTTTTGGAAGAAATGTTGATAAAGAATGATCCAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAATAAATTTTTGGAAGAAATGTTGATAAAGAATGATCCAGAAAT  600

seq1  AACTGAATAGAACACCTTTATCCTGACCCAGATCATAGATCTGAGAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATAGAACACCTTTATCCTGACCCAGATCATAGATCTGAGAACAT  650

seq1  TTAGTTTACAGATCATATGATGGCAAGCAATAATAAAATTCTTAACTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTACAGATCATATGATGGCAAGCAATAATAAAATTCTTAACTTGC  700

seq1  AGATAAGAAAAAATTCCAAACAATTTTGACATTTTGGGAAAATAGTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGAAAAAATTCCAAACAATTTTGACATTTTGGGAAAATAGTCTAT  750

seq1  GGAAAAATACAAGATAA  767
      |||||||||||||||||
seq2  GGAAAAATACAAGATAA  767

seq1: chr15_40759308_40759878
seq2: B6Ng01-025H10.g_67_637 (reverse)

seq1  TATTGATTGACAGTGACAAATACACACACCCCCAAAAAATAGCAATGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATTGACAGTGACAAATACACACACCCCCAAAAAATAGCAATGCAC  50

seq1  ATCAACTGTGTTGAGGGGGGCATGGGGAGAGCATCTTTGGAAATTGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTGTGTTGAGGGGGGCATGGGGAGAGCATCTTTGGAAATTGTAAT  100

seq1  TCTCCCAAAACATAACAGAACAAAACAACAACAACAACAACAACAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAAACATAACAGAACAAAACAACAACAACAACAACAACAACAAC  150

seq1  AAAGGGAGTGTCAATGATGCTTTTCTTTTTTACCAGATTAGAAAATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGTGTCAATGATGCTTTTCTTTTTTACCAGATTAGAAAATGTCT  200

seq1  TTTTCTAATAGATGAGCTCCAAGCATGAATGACTGTCCACACCAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATAGATGAGCTCCAAGCATGAATGACTGTCCACACCAAAGTTT  250

seq1  TCACTTAGAGTGTTCTGCAGTAACATGTATTTCTGTATAAGCTCACACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAGAGTGTTCTGCAGTAACATGTATTTCTGTATAAGCTCACACTC  300

seq1  TTAAAAACATGGGCCTTGAGACCTTTTGCAAAACCCAGCTGTGTACCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACATGGGCCTTGAGACCTTTTGCAAAACCCAGCTGTGTACCTTG  350

seq1  TGAACTGTGTAAAAATCTGTAAAAACAGATTTCTCATAAGATAAGAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTGTAAAAATCTGTAAAAACAGATTTCTCATAAGATAAGAAATA  400

seq1  ACAAGTAAATAAAAGTAGATGCGAATATGGTTCTATGTTGGCTTCTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAATAAAAGTAGATGCGAATATGGTTCTATGTTGGCTTCTTTGC  450

seq1  CAGGCTTATGAAAGCCTCCTTCCACTCAGTCCATTGTCCTGTCCCCGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTATGAAAGCCTCCTTCCACTCAGTCCATTGTCCTGTCCCCGGGG  500

seq1  ACCATTTTTCTCTATTTTCAGAGCACAGTTCACTGTGCTAGATACACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTTCTCTATTTTCAGAGCACAGTTCACTGTGCTAGATACACTGC  550

seq1  ATGTCTACTTGTCTGGAATTC  571
      ||||||||| |||||||||||
seq2  ATGTCTACTAGTCTGGAATTC  571