BAC Information

Click to search

BAC

Clone NameB6Ng01-025J11
Chromosome15 (Build37)
Map Location 45,407,550 - 45,408,321
singlet/doubletsinglet
Overlap genenone
Upstream genePkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
Downstream geneLOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025J11.bB6Ng01-025J11.g
ACCDH856894DH856895
length1,1651,002
definitionDH856894|Mus musculus domesticus DNA, BAC clone: B6Ng01-025J11, 5' end.DH856895|Mus musculus domesticus DNA, BAC clone: B6Ng01-025J11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttttacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagtagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccctatttataatagccagaagctggaaagaactcagat
gccccccaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcagagtcggctaatggatggatcacagggccccca
atggagagctagagaaagtacccaaggagctaagggatcacaaccctata
gtgaccacattatgactaaccagtaccctgagctcttgacttctagctgc
atatgtatcaaagatgcctagtcgccatcacttccaaggagcccattgaa
ccgccaaattttaatgcccaatacagggaacgccatgcccaaaagggaga
tgggtgggttagaag
gaattctcaggaagacaaggctgggactggaaaccagatgatggtgtcag
aggacagtacactactcacttctattggttgtgccctgagtggacccaac
tggcagtggattcatgggggatgggtatacaatagatgttcctagccctc
tccactgccacaggaagagcactgggactaaagcgagatgtcagtggaca
gcatgcctccaaactctagacttgatgaaaatgatagcctgttatatatt
ttcaaagtcacaatagaaagaataaactagagcagcagcggtcgccatct
tggttccgggactcagcagaacttaggaaattagtctgaacaggttagag
ggtgcgccagagaaccggacagcttctgggacaggcggaagcacagagcc
gctgaggcagcacccttggagggccgcagacagccggccaccgtccggac
cagaggacaggtgtccgcctggcttgggaggcggccttagcctcaggagc
agcagtcgccatcttggttccaggactccctggaacataggaatttagtc
tgcacaggtgagagtctgcaccactgaagctgacagcttctgggaactgc
caaagcaacacagcttctgagaaaggccctgttttgggccttcttcttcg
accaggaagaggtccaaaaacaagatatctgcgcaccttcccagtaagag
agcttgccagcagagagttctctgagcactgaaactcagaggagagaatc
tgtctcccagttctgctgagagacagaaacagaatcaccagaagaacaat
ctctaaacagagtcaactataactactaactccagagattaccagatggc
gaaaggtagttggtagaaaggtagaaaggtagaaaggtagaagtgctcta
cccaactcattttatgaagccactattactctgatactaaacccagaaag
atccaacaaagatagagaacttcagacaatttctcttatgatatcgatgc
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45407550_45408321
seq2: B6Ng01-025J11.g_66_837

seq1  GAATTCTCAGGAAGACAAGGCTGGGACTGGAAACCAGATGATGGTGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGAAGACAAGGCTGGGACTGGAAACCAGATGATGGTGTCAG  50

seq1  AGGACAGTACACTACTCACTTCTATTGGTTGTGCCCTGAGTGGACCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTACACTACTCACTTCTATTGGTTGTGCCCTGAGTGGACCCAAC  100

seq1  TGGCAGTGGATTCATGGGGGATGGGTATACAATAGATGTTCCTAGCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGGATTCATGGGGGATGGGTATACAATAGATGTTCCTAGCCCTC  150

seq1  TCCACTGCCACAGGAAGAGCACTGGGACTAAAGCGAGATGTCAGTGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCCACAGGAAGAGCACTGGGACTAAAGCGAGATGTCAGTGGACA  200

seq1  GCATGCCTCCAAACTCTAGACTTGATGAAAATGATAGCCTGTTATATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCTCCAAACTCTAGACTTGATGAAAATGATAGCCTGTTATATATT  250

seq1  TTCAAAGTCACAATAGAAAGAATAAACTAGAGCAGCAGCGGTCGCCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTCACAATAGAAAGAATAAACTAGAGCAGCAGCGGTCGCCATCT  300

seq1  TGGTTCCGGGACTCAGCAGAACTTAGGAAATTAGTCTGAACAGGTTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCGGGACTCAGCAGAACTTAGGAAATTAGTCTGAACAGGTTAGAG  350

seq1  GGTGCGCCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGCCAGAGAACCGGACAGCTTCTGGGACAGGCGGAAGCACAGAGCC  400

seq1  GCTGAGGCAGCACCCTTGGAGGGCCGCAGACAGCCGGCCACCGTCCGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCAGCACCCTTGGAGGGCCGCAGACAGCCGGCCACCGTCCGGAC  450

seq1  CAGAGGACAGGTGTCCGCCTGGCTTGGGAGGCGGCCTTAGCCTCAGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACAGGTGTCCGCCTGGCTTGGGAGGCGGCCTTAGCCTCAGGAGC  500

seq1  AGCAGTCGCCATCTTGGTTCCAGGACTCCCTGGAACATAGGAATTTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCGCCATCTTGGTTCCAGGACTCCCTGGAACATAGGAATTTAGTC  550

seq1  TGCACAGGTGAGAGTCTGCACCACTGAAGCTGACAGCTTCTGGGAACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGTGAGAGTCTGCACCACTGAAGCTGACAGCTTCTGGGAACTGC  600

seq1  CAAAGCAACACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAACACAGCTTCTGAGAAAGGCCCTGTTTTGGGCCTTCTTCTTCG  650

seq1  ACCAGGAAGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCAGTAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAAGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCAGTAAGAG  700

seq1  AGCTTGCCAGCAGAGAGTTCTCTGAGCACTGAAACTCAGAGGAGAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCCAGCAGAGAGTTCTCTGAGCACTGAAACTCAGAGGAGAGAATC  750

seq1  TGTCTCCCAGTTCTGCTGAGAG  772
      ||||||||||||||||||||||
seq2  TGTCTCCCAGTTCTGCTGAGAG  772