BAC Information

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BAC

Clone NameB6Ng01-025P16
Chromosome15 (Build37)
Map Location 7,538,532 - 7,580,614
singlet/doubletdoublet
Overlap genenone
Upstream geneFyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
Downstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025P16.bB6Ng01-025P16.g
ACCDH857158DH857159
length1,165936
definitionDH857158|Mus musculus domesticus DNA, BAC clone: B6Ng01-025P16, 5' end.DH857159|Mus musculus domesticus DNA, BAC clone: B6Ng01-025P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,538,532 - 7,539,704)(7,579,683 - 7,580,614)
sequence
gaattcaagtatgaaagatgttttagttcaggtttctattgctgtgaaga
taccccatgaccatgacaactcttatacaggaaaacatttaattgatgct
ggtttacagttcagaggcttagttcactatcctcatggcaggaagcatgg
aagcaggtaagcaaacaccgttctagagaggtagctgggagttctacatc
tgggactgcagacagcagggagagaaagtaagcaactggacctggtttga
gcttctgagatgtccaagcccagcccctagtaacacatctctttcaacaa
aaccacgcctactccaacaaggccacacctcctattagtgccactcccta
tgggcctatgaaagccatttttattcaaaccagcacaaatgtgaatctca
attttggggcttaattagtttagaagtcattttaatatcttattgttaaa
tgagctgtcactccatatttcaacttttaagaatgaaagatacaaacttt
ttaaataacactggaaaatgacaaacctctgaaaatagttgacttgtaaa
ttaaaaataaattataaatcttttctttagcactaggtttttattgtcat
taaaattgaaaggaaaaaggaacaaaaagaaggcatcgttggtttacaac
ttggatcaacattcaatctatttttattgtatctcctttgctcaagatag
aggatagcttaggatagtatttactttataatgaatagtatttgtgtgtt
gaaagtgccagtgctgacctacactggggaactggagtaagtaaaggcat
tttaccatttaatagtttgaatgtgaagtgtccccaggaaaggctcctga
gttcaagatttggtacccaactattggtaccagtaagcagttattggatc
ttgaagaaacctacctcattcaatacgttaaggacattgatgaacttata
atttattagaagtgttagagagggtagcccagttggaagagcggcattag
aggcatgctcttgaaggatgtacacattatctccatcgctctctctgctc
caacactttgaggtcagcatcttccctcagccatgtgccctcccaccatg
atgctcttccctcccatactgcttcagaaggtacaaagccacgttttcat
cagcctctgaaccgc
gaattccaggatcgctgctaatgtagggtgaactaagctgctgtcttcag
tgatcagcatctgctgtacggagccttgagtcctggatgctctcatttct
gcttccatccgaagcctatgttcactgcgctcttagcaggacacatagtc
tacaggttctcaaccaaaggcaaagagacatagcagttgccccagtggat
ggttgctcagctcctggcacttgaatgctaatgcctaaagagtgactaca
ttgtctgagctctttaaggaatgtcactccaagaaccttcacagtctatt
catgtctgcttgagttttgtgcagcaaagttttcttttgcactgtgtttg
acaaacttcatccatgagccaaacctggactgcctgtggcctgtgcacta
ctaatggtttagtacatctttaaattgagaggaaggaattgaaaaaataa
tattttgtgacatgtgaaaattatatgaaattcacattgcagagtccatg
aataaagttttattggaacacagccatgctcgttcgtttacatgttgtct
ctggctgcagtgagaattataatgcttgcgacagagaccatatgtcttgc
aaagcataaactatttactatctggctgtttatagaaagtgtttgccaat
tcttgatctaaactattgcactaccttctatttacaatttcttcttgttc
taagaagttctttctttgcacacattaatcattttactttttgactctgg
gtgtctgaagaatggcagtgatgggttttgttgattcggaaaacaaccta
ctaacggggtttgacgtgaggtactggctatagcagtcacaaaatgacaa
cagacagctttaagcccagcttctctcatcagctaggacgctggggtctt
agccatctcacttttgggagtggggtgttttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_7538532_7539704
seq2: B6Ng01-025P16.b_46_1210

seq1  GAATTCAAGTATGAAAGATGTTTTAGTTCAGGTTTCTATTGCTGTGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTATGAAAGATGTTTTAGTTCAGGTTTCTATTGCTGTGAAGA  50

seq1  TACCCCATGACCATGACAACTCTTATACAGGAAAACATTTAATTGATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATGACCATGACAACTCTTATACAGGAAAACATTTAATTGATGCT  100

seq1  GGTTTACAGTTCAGAGGCTTAGTTCACTATCCTCATGGCAGGAAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACAGTTCAGAGGCTTAGTTCACTATCCTCATGGCAGGAAGCATGG  150

seq1  AAGCAGGTAAGCAAACACCGTTCTAGAGAGGTAGCTGGGAGTTCTACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTAAGCAAACACCGTTCTAGAGAGGTAGCTGGGAGTTCTACATC  200

seq1  TGGGACTGCAGACAGCAGGGAGAGAAAGTAAGCAACTGGACCTGGTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTGCAGACAGCAGGGAGAGAAAGTAAGCAACTGGACCTGGTTTGA  250

seq1  GCTTCTGAGATGTCCAAGCCCAGCCCCTAGTAACACATCTCTTTCAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGAGATGTCCAAGCCCAGCCCCTAGTAACACATCTCTTTCAACAA  300

seq1  AACCACGCCTACTCCAACAAGGCCACACCTCCTATTAGTGCCACTCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACGCCTACTCCAACAAGGCCACACCTCCTATTAGTGCCACTCCCTA  350

seq1  TGGGCCTATGAAAGCCATTTTTATTCAAACCAGCACAAATGTGAATCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTATGAAAGCCATTTTTATTCAAACCAGCACAAATGTGAATCTCA  400

seq1  ATTTTGGGGCTTAATTAGTTTAGAAGTCATTTTAATATCTTATTGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGGCTTAATTAGTTTAGAAGTCATTTTAATATCTTATTGTTAAA  450

seq1  TGAGCTGTCACTCCATATTTCAACTTTTAAGAATGAAAGATACAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTCACTCCATATTTCAACTTTTAAGAATGAAAGATACAAACTTT  500

seq1  TTAAATAACACTGGAAAATGACAAACCTCTGAAAATAGTTGACTTGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAACACTGGAAAATGACAAACCTCTGAAAATAGTTGACTTGTAAA  550

seq1  TTAAAAATAAATTATAAATCTTTTCTTTAGCACTAGGTTTTTATTGTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAAATTATAAATCTTTTCTTTAGCACTAGGTTTTTATTGTCAT  600

seq1  TAAAATTGAAAGGAAAAAGGAACAAAAAGAAGGCATCGTTGGTTTACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGAAAGGAAAAAGGAACAAAAAGAAGGCATCGTTGGTTTACAAC  650

seq1  TTGGATCAACATTCAATCTATTTTTATTGTATCTCCTTTGCTCAAGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCAACATTCAATCTATTTTTATTGTATCTCCTTTGCTCAAGATAG  700

seq1  AGGATAGCTTAGGATAGTATTTACTTTATAATGAATAGTATTTGTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCTTAGGATAGTATTTACTTTATAATGAATAGTATTTGTGTGTT  750

seq1  GAAAGTGCCAGTGCTGACCTACACTGGGGAACTGGAGTAAGTAAAGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCCAGTGCTGACCTACACTGGGGAACTGGAGTAAGTAAAGGCAT  800

seq1  TTTACCATTTAATAGTTTGAATGTGAAGTGTCCCCAGGAAAGGCTCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATTTAATAGTTTGAATGTGAAGTGTCCCCAGGAAAGGCTCCTGA  850

seq1  GTTCAAGATTTGGTACCCAACTATTGGTACCAGTAAGCAGTTATTGGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGATTTGGTACCCAACTATTGGTACCAGTAAGCAGTTATTGGATC  900

seq1  TTGAAGAAACCTACCTCATTCAATACGTT-AGGACATTGATGAACTTATA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGAAGAAACCTACCTCATTCAATACGTTAAGGACATTGATGAACTTATA  950

seq1  ATTTATTAAGAAGTGGTAGAGAGGGTAGCCCAGTTGGAAGAAGGCGGGCA  999
      ||||||| ||||||| |||||||||||||||||||||||||  || ||||
seq2  ATTTATT-AGAAGTGTTAGAGAGGGTAGCCCAGTTGGAAGA--GC-GGCA  996

seq1  TTAGAGGCATGCTCTTGAAGGATGTACACATTATCTTCCATCGCCTCCTC  1049
      ||||||||||||||||||||||||||||||||||| ||||||||   |||
seq2  TTAGAGGCATGCTCTTGAAGGATGTACACATTATC-TCCATCGC--TCTC  1043

seq1  TCTGCTTCCCAACCACTTTGAAGTCAGCATCTTCCCTCAGCCATGTGCCT  1099
      ||||||  |||| |||||||| ||||||||||||||||||||||||||| 
seq2  TCTGCT--CCAA-CACTTTGAGGTCAGCATCTTCCCTCAGCCATGTGCCC  1090

seq1  CCCCACCATGATGCTCTTCCTCACATATACTGGCTCAGAAGGGACAAAGC  1149
       ||||||||||||||||||| | |  ||||||  |||||||| |||||||
seq2  TCCCACCATGATGCTCTTCC-CTCCCATACTGCTTCAGAAGGTACAAAGC  1139

seq1  CACGTGTTCATCAG-CTCTG-ACCGC  1173
      ||||| |||||||| ||||| |||||
seq2  CACGTTTTCATCAGCCTCTGAACCGC  1165

seq1: chr15_7579683_7580614
seq2: B6Ng01-025P16.g_69_1004 (reverse)

seq1  CCCCCAAAACACCCCACTCCC-AAAGTGAGATGGCTAAGACCCAAGCGTC  49
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CCCCCAAAACACCCCACTCCCAAAAGTGAGATGGCTAAGACCCCAGCGTC  50

seq1  CTAGCTGATGAGAG-AGCTGGGCCTAAAGCTGTCTGTTGTCATTTTGTTG  98
      |||||||||||||| |||||||| ||||||||||||||||||||||| ||
seq2  CTAGCTGATGAGAGAAGCTGGGCTTAAAGCTGTCTGTTGTCATTTTG-TG  99

seq1  ACTGCTATAGCCAGTACCTCACGTCAAACCCCGTTAGTAGGTTGTTTTCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATAGCCAGTACCTCACGTCAAACCCCGTTAGTAGGTTGTTTTCC  149

seq1  GAATCAAC-AAACCCATCACTGCCATTCTTCAGACA-CCAGAGTCAAAAA  196
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  GAATCAACAAAACCCATCACTGCCATTCTTCAGACACCCAGAGTCAAAAA  199

seq1  GTAAAATGATTAATGTGTGC-AAGAAAGAACTTCTTAGAACAAGAAGAAA  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTAAAATGATTAATGTGTGCAAAGAAAGAACTTCTTAGAACAAGAAGAAA  249

seq1  TTGTAAATAGAAGGTAGTGCAATAGTTTAGATCAAGAATTGGCAAACACT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATAGAAGGTAGTGCAATAGTTTAGATCAAGAATTGGCAAACACT  299

seq1  TTCTATAAACAGCCAGATAGTAAATAGTTTATGCTTTGCAAGACATATGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAACAGCCAGATAGTAAATAGTTTATGCTTTGCAAGACATATGG  349

seq1  TCTCTGTCGCAAGCATTATAATTCTCACTGCAGCCAGAGACAACATGTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCGCAAGCATTATAATTCTCACTGCAGCCAGAGACAACATGTAA  399

seq1  ACGAACGAGCATGGCTGTGTTCCAATAAAACTTTATTCATGGACTCTGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACGAGCATGGCTGTGTTCCAATAAAACTTTATTCATGGACTCTGCA  449

seq1  ATGTGAATTTCATATAATTTTCACATGTCACAAAATATTATTTTTTCAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATTTCATATAATTTTCACATGTCACAAAATATTATTTTTTCAAT  499

seq1  TCCTTCCTCTCAATTTAAAGATGTACTAAACCATTAGTAGTGCACAGGCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCTCAATTTAAAGATGTACTAAACCATTAGTAGTGCACAGGCC  549

seq1  ACAGGCAGTCCAGGTTTGGCTCATGGATGAAGTTTGTCAAACACAGTGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGTCCAGGTTTGGCTCATGGATGAAGTTTGTCAAACACAGTGCA  599

seq1  AAAGAAAACTTTGCTGCACAAAACTCAAGCAGACATGAATAGACTGTGAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACTTTGCTGCACAAAACTCAAGCAGACATGAATAGACTGTGAA  649

seq1  GGTTCTTGGAGTGACATTCCTTAAAGAGCTCAGACAATGTAGTCACTCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTGGAGTGACATTCCTTAAAGAGCTCAGACAATGTAGTCACTCTT  699

seq1  TAGGCATTAGCATTCAAGTGCCAGGAGCTGAGCAACCATCCACTGGGGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTAGCATTCAAGTGCCAGGAGCTGAGCAACCATCCACTGGGGCA  749

seq1  ACTGCTATGTCTCTTTGCCTTTGGTTGAGAACCTGTAGACTATGTGTCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTATGTCTCTTTGCCTTTGGTTGAGAACCTGTAGACTATGTGTCCT  799

seq1  GCTAAGAGCGCAGTGAACATAGGCTTCGGATGGAAGCAGAAATGAGAGCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGCGCAGTGAACATAGGCTTCGGATGGAAGCAGAAATGAGAGCA  849

seq1  TCCAGGACTCAAGGCTCCGTACAGCAGATGCTGATCACTGAAGACAGCAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACTCAAGGCTCCGTACAGCAGATGCTGATCACTGAAGACAGCAG  899

seq1  CTTAGTTCACCCTACATTAGCAGCGATCCTGGAATTC  932
      |||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTCACCCTACATTAGCAGCGATCCTGGAATTC  936