BAC Information

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BAC

Clone NameB6Ng01-026F15
Chromosome15 (Build37)
Map Location 80,364,724 - 80,423,622
singlet/doubletdoublet
Overlap geneEnthd1
Upstream geneDdx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1, Unc84b, Dnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7, Pdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i
Downstream geneGrap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026F15.bB6Ng01-026F15.g
ACCDH857421DH857422
length1,0081,036
definitionDH857421|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F15, 5' end.DH857422|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,422,601 - 80,423,622)(80,364,724 - 80,365,764)
sequence
gaattcagaacctgacaccacagaactggtgatccaagttcacaaaggaa
acttaactttaatccactgggactgcccttattggcgtgaccattattca
cgtaaatccgatttctgtagcagagattatgtaatgagaaattgggagga
gcacagctcatgagaaccttctagaactgtcaccagccagtgtggactgt
tgtccttcacacagcacatatgacatgccaggaagtgatgcaaaagagac
tcaccctgaccggtaaaggacttctctcgtgtggagatcccctggcccac
tcactgtatgtcagttgatatatttcacatcacctgccccttctagtgta
ctcaacagactttatttactagttacgttcttccttagttgctgcagtag
ctggcatcagcaggctgtatacatctttaatgaggtaatttaatgtttgc
tggggggactatccccaaacctattaaaagcagatgcttggtctatagta
aaggttgaaggaatggagacgggaaagagagcttgaagcacctctgcccg
gtgagtgggaagggaggtgaaggttatgcgtgacagtaacaacagaagtg
tcactggagaataaagtcggggaagggctcgcaggaggcaggtggtaggg
gttgatgactcttaagtagaatcaagagatgggtctaatgtaacgagaaa
ctttaaaactgcaaggtgtatgctattaatgactcggggcggacgagata
taaaacagcaagaaccaaatccctgacctggagtcacctagcagaagcca
ttctcacaatggatgcttcagccagtgatgaagcatttggtataaagata
cataaaggaaatgaaaggagcattgtgttttagtgctgggtactatgcca
aaagtacctttgtatagtcgaatctagcaagtggccacttaggggcgcta
aaatagtcagattttatcatttctacgcccacccgaaatgttgaggtaat
tgaaagta
gaattcagaagcaacacgttctgaaaacttccatccaactgtctactgaa
cacgctccttcatctctgctccctgcagaatggagcctaacagtgggaca
gtcctgctgatactgagttggtaatttgtgtgaagctggtgttttatgtc
tagctgttctcaacagacacctatcaagtgttaggccgctgcttacagta
cgtacttttactgcacagacctgcagtcttcttgcagtcttgtgagtgct
tcttctccgaggtaaggctttctgggatgagcacagaagtgcacactgta
ggtgaggtccccgtggcagataatctgctggggaatgacatggagtagga
ggtccgctgcctcgtccacgtggccacttccctctctttatggagcagct
gctcgtccatcagcagagttatgacctgcttcgacctctcccggatgtag
tgacctgaaaaatacccgagagcttgcttaaacatggaaaaactgatgaa
aactataattaattttattctaaagaaaatgaagaagtgacaatgtagca
aagtggaaaggcaggaagactgtgggcgacacactcctctctgtgcgcac
tgagcaaacacatcatcaatacgtgatggaattgcatcttatctggcatt
atacttttcattttaaatgcattattggatttttcttggaaagccatcca
tacgctgcaataaatcaactaacacaggcacgcaaagaaggtttgagcgt
gaggctagggagattgggcagtgggtaaagtgcttgcgctgagggcagga
gaacttgagtacagatccccggaacccaccttcaaacctaagagtggcgg
catgtgcctgcagcctccatgctgggaaacttagaccgaggccagagatg
ccactgaccagccaatctaatcaaactggcaacgctctgggttcagtgca
actctatctcaaaaatatggagagaggaattgaggacaatctgtctcact
tctggcctccctctgtacctgcaagaccagcagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_80422601_80423622
seq2: B6Ng01-026F15.b_44_1051 (reverse)

seq1  TACTGTCAATTAACCTCAACATATCGGGTTGAGCTGTATGAAATTGATAA  50
      |||| |||||| |||||||||| ||||| || || ||| |||| |||| |
seq2  TACTTTCAATT-ACCTCAACATTTCGGG-TGGGC-GTA-GAAA-TGAT-A  44

seq1  AAATCTGACTAATTTTTAGCGCCCCTAAAGTGGCCACTTGCTAGGATTCG  100
      |||||||||||  ||||||||||||| |||||||||||||||| ||||||
seq2  AAATCTGACTA--TTTTAGCGCCCCT-AAGTGGCCACTTGCTA-GATTCG  90

seq1  ACCTTATACAAAGGTACTTTTGGCATAGTATCCCAGCACCTAAAACACAA  150
      ||  |||||||||||||||||||||||||| ||||||| |||||||||||
seq2  AC--TATACAAAGGTACTTTTGGCATAGTA-CCCAGCA-CTAAAACACAA  136

seq1  TGCTCCTTTCATTTCCTTTATGTATCTTTATACCAAATGCTTCATCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTTCATTTCCTTTATGTATCTTTATACCAAATGCTTCATCACTG  186

seq1  GCTGAAGCATCCATTGTGAGAATGGCTTCTGCTAGGTGACTCCAGGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGCATCCATTGTGAGAATGGCTTCTGCTAGGTGACTCCAGGTCAG  236

seq1  GGATTTGGTTCTTGCTGTTTTATATCTCGTCCGCCCCGAGTCATTAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGTTCTTGCTGTTTTATATCTCGTCCGCCCCGAGTCATTAATAG  286

seq1  CATACACCTTGCAGTTTTAAAGTTTCTCGTTACATTAGACCCATCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACCTTGCAGTTTTAAAGTTTCTCGTTACATTAGACCCATCTCTTG  336

seq1  ATTCTACTTAAGAGTCATCAACCCCTACCACCTGCCTCCTGCGAGCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTTAAGAGTCATCAACCCCTACCACCTGCCTCCTGCGAGCCCTT  386

seq1  CCCCGACTTTATTCTCCAGTGACACTTCTGTTGTTACTGTCACGCATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGACTTTATTCTCCAGTGACACTTCTGTTGTTACTGTCACGCATAAC  436

seq1  CTTCACCTCCCTTCCCACTCACCGGGCAGAGGTGCTTCAAGCTCTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCTCCCTTCCCACTCACCGGGCAGAGGTGCTTCAAGCTCTCTTTC  486

seq1  CCGTCTCCATTCCTTCAACCTTTACTATAGACCAAGCATCTGCTTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTCCATTCCTTCAACCTTTACTATAGACCAAGCATCTGCTTTTAAT  536

seq1  AGGTTTGGGGATAGTCCCCCCAGCAAACATTAAATTACCTCATTAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGGGATAGTCCCCCCAGCAAACATTAAATTACCTCATTAAAGAT  586

seq1  GTATACAGCCTGCTGATGCCAGCTACTGCAGCAACTAAGGAAGAACGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAGCCTGCTGATGCCAGCTACTGCAGCAACTAAGGAAGAACGTAA  636

seq1  CTAGTAAATAAAGTCTGTTGAGTACACTAGAAGGGGCAGGTGATGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAATAAAGTCTGTTGAGTACACTAGAAGGGGCAGGTGATGTGAAA  686

seq1  TATATCAACTGACATACAGTGAGTGGGCCAGGGGATCTCCACACGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAACTGACATACAGTGAGTGGGCCAGGGGATCTCCACACGAGAGA  736

seq1  AGTCCTTTACCGGTCAGGGTGAGTCTCTTTTGCATCACTTCCTGGCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTACCGGTCAGGGTGAGTCTCTTTTGCATCACTTCCTGGCATGT  786

seq1  CATATGTGCTGTGTGAAGGACAACAGTCCACACTGGCTGGTGACAGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGCTGTGTGAAGGACAACAGTCCACACTGGCTGGTGACAGTTCT  836

seq1  AGAAGGTTCTCATGAGCTGTGCTCCTCCCAATTTCTCATTACATAATCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTCTCATGAGCTGTGCTCCTCCCAATTTCTCATTACATAATCTC  886

seq1  TGCTACAGAAATCGGATTTACGTGAATAATGGTCACGCCAATAAGGGCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAGAAATCGGATTTACGTGAATAATGGTCACGCCAATAAGGGCAG  936

seq1  TCCCAGTGGATTAAAGTTAAGTTTCCTTTGTGAACTTGGATCACCAGTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGGATTAAAGTTAAGTTTCCTTTGTGAACTTGGATCACCAGTTC  986

seq1  TGTGGTGTCAGGTTCTGAATTC  1022
      ||||||||||||||||||||||
seq2  TGTGGTGTCAGGTTCTGAATTC  1008

seq1: chr15_80364724_80365764
seq2: B6Ng01-026F15.g_67_1102

seq1  GAATTCAGAAGCAACACGTTCTGAAAACTTCCATCCAACTGTCTACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGCAACACGTTCTGAAAACTTCCATCCAACTGTCTACTGAA  50

seq1  CACGCTCCTTCATCTCTGCTCCCTGCAGAATGGAGCCTAACAGTGGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTCCTTCATCTCTGCTCCCTGCAGAATGGAGCCTAACAGTGGGACA  100

seq1  GTCCTGCTGATACTGAGTTGGTAATTTGTGTGAAGCTGGTGTTTTATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCTGATACTGAGTTGGTAATTTGTGTGAAGCTGGTGTTTTATGTC  150

seq1  TAGCTGTTCTCAACAGACACCTATCAAGTGTTAGGCCGCTGCTTACAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTCTCAACAGACACCTATCAAGTGTTAGGCCGCTGCTTACAGTA  200

seq1  CGTACTTTTACTGCACAGACCTGCAGTCTTCTTGCAGTCTTGTGAGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTTTACTGCACAGACCTGCAGTCTTCTTGCAGTCTTGTGAGTGCT  250

seq1  TCTTCTCCGAGGTAAGGCTTTCTGGGATGAGCACAGAAGTGCACACTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCGAGGTAAGGCTTTCTGGGATGAGCACAGAAGTGCACACTGTA  300

seq1  GGTGAGGTCCCCGTGGCAGATAATCTGCTGGGGAATGACATGGAGTAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGTCCCCGTGGCAGATAATCTGCTGGGGAATGACATGGAGTAGGA  350

seq1  GGTCCGCTGCCTCGTCCACGTGGCCACTTCCCTCTCTTTATGGAGCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCGCTGCCTCGTCCACGTGGCCACTTCCCTCTCTTTATGGAGCAGCT  400

seq1  GCTCGTCCATCAGCAGAGTTATGACCTGCTTCGACCTCTCCCGGATGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTCCATCAGCAGAGTTATGACCTGCTTCGACCTCTCCCGGATGTAG  450

seq1  TGACCTGAAAAATACCCGAGAGCTTGCTTAAACATGGAAAAACTGATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGAAAAATACCCGAGAGCTTGCTTAAACATGGAAAAACTGATGAA  500

seq1  AACTATAATTAATTTTATTCTAAAGAAAATGAAGAAGTGACAATGTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAATTAATTTTATTCTAAAGAAAATGAAGAAGTGACAATGTAGCA  550

seq1  AAGTGGAAAGGCAGGAAGACTGTGGGCGACACACTCCTCTCTGTGCGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAAGGCAGGAAGACTGTGGGCGACACACTCCTCTCTGTGCGCAC  600

seq1  TGAGCAAACACATCATCAATACGTGATGGAATTGCATCTTATCTGGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAACACATCATCAATACGTGATGGAATTGCATCTTATCTGGCATT  650

seq1  ATACTTTTCATTTTAAATGCATTATTGGATTTTTCTTGGAAAGCCATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTCATTTTAAATGCATTATTGGATTTTTCTTGGAAAGCCATCCA  700

seq1  TACGCTGCAATAAATCAACTAACACAGGCACGCAAAGAAGGTTTGAGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTGCAATAAATCAACTAACACAGGCACGCAAAGAAGGTTTGAGCGT  750

seq1  GAGGCTAGGGAGATTGGGCAGTGGGTAAAGTGCTTGCGCTGAGGGCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAGGGAGATTGGGCAGTGGGTAAAGTGCTTGCGCTGAGGGCAGGA  800

seq1  GAACTTGAGTACAGATCCCCGGAACCCACC-TCAAACCTAAGAGTGGCGG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAACTTGAGTACAGATCCCCGGAACCCACCTTCAAACCTAAGAGTGGCGG  850

seq1  CATGTGCCTGCAGCCTCCATGCTGGGAAACCTAGACCGGAGGCCAGAGAT  899
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  CATGTGCCTGCAGCCTCCATGCTGGGAAACTTAGACC-GAGGCCAGAGAT  899

seq1  G-CACTGACCAGCCAATCTAATCAAACTGGC-ACGCTCTGGGTTCAGTGC  947
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCCACTGACCAGCCAATCTAATCAAACTGGCAACGCTCTGGGTTCAGTGC  949

seq1  AACCCTATCTCAAAAAATAAGGTAGAGAGGAATTGAGGAACACATCTGTC  997
      ||| ||||||| ||||||| || ||||||||||||||| ||| |||||||
seq2  AACTCTATCTC-AAAAATATGG-AGAGAGGAATTGAGG-ACA-ATCTGTC  995

seq1  TCAACTTCTGGCCTCCACTTGTACCTGCACAGACCAGCAAGTGT  1041
      || |||||||||||||   |||||||||| |||||||| |||||
seq2  TC-ACTTCTGGCCTCCCTCTGTACCTGCA-AGACCAGC-AGTGT  1036