BAC Information

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BAC

Clone NameB6Ng01-026I10
Chromosome15 (Build37)
Map Location 82,205,341 - 82,205,955
singlet/doubletsinglet
Overlap geneCyp2d22
Upstream geneSt13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6
Downstream geneLOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I10.bB6Ng01-026I10.g
ACCDH857544DH857545
length1,264616
definitionDH857544|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I10, 5' end.DH857545|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacctgataaacagattcagtgcagtagctggatataaaat
taactcaaacaaatcactggcctttctctacacaaaggataaacaggata
agaaagaaattagggaaacaatacacttcacaatagtcacaaataatata
aaataccttggtgtaactctaactaagggagtgaaagatctgtacaataa
gaacttcaagtttctgaagaaagaaattgaagatctccaaagatggaaag
atttcccatgctcatggattggcaggattaatatagtaaaaatggctatc
atgccgaaggcaatctagactcaatgcaatccccatcaaataccaactca
attcttcacagagttcgaaagggcaattggcaaaatcatctggaataaca
aaaaacctaggatagcaaaaactattctcaacaataaaagaaacactggg
ggaatcaccatccctgacatcaagcaagctgtactacagagcaattgtga
taaaaaaaaaaaacaactgcatggtactggtacagtgacagacaggtaga
tcaatggaatagaaatgaagacccagaaatgaacccacaaacctatgcta
acttgatctttgacaaaggagctaaaaccatccagtggaaaagacagcat
tttcaacaaatggtgctggctcaaactggcagttatcatgtagaagaatg
ccaattgatccattcttatctcctttgtacaaagctaaagtctaagtgga
tcatggaactccacataaaccagagacactaaaatttatagaggagaaat
agggaaaagcctcgaagatatggcacagggggaaaattcctaaacagaac
agcaaggcctgtgctgtaagatcagaatcaacaatgggacctcataaact
gcaaagcttctgtaaggcaaaagacactgtcaataagacaaaaaggctac
aacagattggggaaaggatctttaccaacctaaatccatagtgacttaaa
tccaatatttacaaggactcaaaagctggactcaagaaaatcaatacccc
attaaaatgggtaagaatttacaatgagttcttctctgaagaattcgaat
ggctgagaagacttgaaaaaaatgttcacatcttaatctacttgaggcaa
tctaaccatttctgaatttcctctcacccgtcgaaggctaatatcaaatc
gtaccgaaatgctgtagtgtgaagagaattctcgatggtgaatatgacgt
gcacaccctcgtta
gaattccattgcagatggttatgagtcaccatgtggttgctgggaattga
actcaggacctctggaagtgcttaacctctgggccatctttccagtgccc
ccttccacattcttaaaacatttccttctggtggaatgaaaaggaacagg
aagcctatatgacttgatttccctttgtgtgtgtgtgtgtgtgtataatt
tttgtcttagcatgtagccagggctggcttggaattttctacgtagatca
agctggtgctgaattcacagagatctgctggcttttgcctcctctgaatg
ctgggattaaaggtctccacgactgcattgggctttttccttttaaaatg
ttagatttctttctttctttttctttttctttttctttttctttttcttt
tcttttttgaaacagtttcactgtgtagcgtgggctgtcctggaactcag
tatgttagatgagactggtctagagctcaaagaaatatgcccgcctctgc
ctcttaagtgctggggttagaggcacacaccttcacagctggccttgaag
tctttggtttagagatggtttaagatggaatttataaccccagctgcttt
agcctcccaattacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_82205341_82205955
seq2: B6Ng01-026I10.g_69_684

seq1  GAATTCCATTGCAGATGGTTATGAGTCACCATGTGGTTGCTGGGAATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCAGATGGTTATGAGTCACCATGTGGTTGCTGGGAATTGA  50

seq1  ACTCAGGACCTCTGGAAGTGCTTAACCTCTGGGCCATCTTTCCAGTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGACCTCTGGAAGTGCTTAACCTCTGGGCCATCTTTCCAGTGCCC  100

seq1  CCTTCCACATTCTTAAAACATTTCCTTCTGGTGGAATGAAAAGGAACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACATTCTTAAAACATTTCCTTCTGGTGGAATGAAAAGGAACAGG  150

seq1  AAGCCTATATGACTTGATTTCCCTTTGTGTGTGTGTGTGTGTGTATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTATATGACTTGATTTCCCTTTGTGTGTGTGTGTGTGTGTATAATT  200

seq1  TTTGTCTTAGCATGTAGCCAGGGCTGGCTTGGAATTTTCTACGTAGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTAGCATGTAGCCAGGGCTGGCTTGGAATTTTCTACGTAGATCA  250

seq1  AGCTGGTGCTGAATTCACAGAGATCTGCTGGCTTTTGCCTCCTCTGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTGCTGAATTCACAGAGATCTGCTGGCTTTTGCCTCCTCTGAATG  300

seq1  CTGGGATTAAAGGTCTCCACGACTGCATTGGGCTTTTTCCTTTTAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGTCTCCACGACTGCATTGGGCTTTTTCCTTTTAAAATG  350

seq1  TTAGATTTCTTTCTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTCTTTCTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTT  400

seq1  TCTTTTTTGAAACAGTTTCACTGTGTAGCGTGGGCTGTCCTGGAACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGAAACAGTTTCACTGTGTAGCGTGGGCTGTCCTGGAACTCAG  450

seq1  TATGTTAGATGAGACTGGTCTAGAGCTCAAAGAAATATGCCCGCCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAGATGAGACTGGTCTAGAGCTCAAAGAAATATGCCCGCCTCTGC  500

seq1  CTCTTAAGTGCTGGGGTTAGAGGCACACACCTTCACAGCTGGCCTTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGTGCTGGGGTTAGAGGCACACACCTTCACAGCTGGCCTTGAAG  550

seq1  TCTTTGGTTTAGAGATGGTTTAAGATGGAATTTATAA-CCCAGCTGCTTT  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTTTGGTTTAGAGATGGTTTAAGATGGAATTTATAACCCCAGCTGCTTT  600

seq1  AGCCTCCCAATTACAG  615
      ||||||||||||||||
seq2  AGCCTCCCAATTACAG  616