BAC Information

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BAC

Clone NameB6Ng01-026P10
Chromosome15 (Build37)
Map Location 22,663,202 - 22,792,837
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040351, EG545091
Downstream geneCdh18, LOC624863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026P10.bB6Ng01-026P10.g
ACCDH857843DH857844
length1,1741,175
definitionDH857843|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P10, 5' end.DH857844|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,663,202 - 22,664,372)(22,791,631 - 22,792,837)
sequence
gaattctttttttttctctctctctaatttgaaagttcacttaattcctg
aaaataattttaatacaaatacaaagttttataaatagcactctgctaat
attataaagtcatatacatgtttgctaagaaatattgcagaaattttcat
ttttgtgcttctttttagttttttgtctttgattggaaataaccttttcc
atacaatatattctgattactgattctccttcctcagctcttccaacttc
ttcttttctcctcctattagaatccagattctttctatctatccttacaa
aacaaaagattaataataataataataataataataataataatgcaaaa
gcattcaaattggactaggactcaaaaatactaaaagaggaaaaagaaac
aagttaaaaagcctaagaaacacatataagtgcagaaacacacagattct
cacaacacaggaatcccattacaacacaaaagcaaaagccataatatata
tgaatatatgtacaagttacttgtaaaacaaaaatcacaaaagaaagaaa
gaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaa
gaaaagaaaaaaaaaggctttcaacaaaattaaaagataaataacctcca
aacatgttattgggcttgtttcatttggcccttctactactaggcatggg
ggctattttagacagggtttctctgtatagccctggatgtcctggaactc
accctgtagaccaggctagcctcaaactcagaaatcctcctgcctctgcc
tctcaagagctgggattaaaggcatgtaccaccatgcctggctgggggct
acttttgagagggttttgtttccccagtgagaccctcatggagaacctgt
gtaattttatatgactgacaagcatgtgtttaattttagcctggaacatt
gaaacatatacacacttgggaacttgaaataaacatccccgaaagaaaaa
aagaaaagaaaaagaaaaggcaaaaacaattcatgagctgttagaattat
tcacagatgatgggttcaccgaaaatgtcatacaatgtgacccctgcctt
ccatggagtaagaagaacagaaagaaatatcaaaaagcaagccaatttgc
taaagagacgcaaataaaggaaaa
gaattcttgcccaatgttcataaaactgtgacctcctatgacatagttag
tccttatgttcatcaatggactttacgaagaagttctttccttttatgaa
atcaaagaaccagttttaaattttatgttccttctagataccaacttttg
tgaaagattctgatcaaaatttttaacattcttgcacaataattgaatac
attattgctatatttataggatttctgtctcagttatctattatctatct
atctatctatctatctatctatctatctatctatctcactattggtaaac
attaattcagttttcagtcacaaaatctggtagtgcttttagatttgttt
cttcatgttcatatctaattcgatagaactattttcaaagtacatagaac
tggataattactttccatcatacctatcagcacatccatataaactttgc
catgtttctattaccataatagaaaaacaaaatcaaaactgtaaaatgat
aacgtatttcaactgtttatgtagatatcagaaaaaatctgaaatgaatg
ctgaaatcattttactttctcaaatagaatatgtaaaacatgactgaagg
agaagaaggagtttgcaaccccataggaaaaacaacaatatcaagtaatc
agatggtcccagagctcccaggagctaaaccactagccaaagagtacaca
tgagagacccatgactctagcctcatatgtagcagaggatgaccttgtca
gacatcaatgggaagagaggcccttgatcaagaaagatggtgtagaatgt
ttgtaagagacagaatatcatgaagtctgctattaaacagtcaactctag
atggtgtagaatgtttgtaagagacagaatatcatgaagtctgctattaa
acagtcaactctagaaatgcctgcaataataaaaccatagccttatcaat
atttatgaaatcattaatattgagaggaaacttttacagggtcaagaaga
caaagaactacagaaaatattattgactgttgaaatgatctgactttccc
tgaaactagacattattgttcagtatgtttgtgtcggtttgaggcattac
acattacaaaaaaacaacagcaatctgaactgattttctgtatgacgtac
gaaaatgacaagctaactgggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22663202_22664372
seq2: B6Ng01-026P10.b_44_1217

seq1  GAATTCTTTTTTTTTCTCTCTCTCTAATTTGAAAGTTCACTTAATTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTTCTCTCTCTCTAATTTGAAAGTTCACTTAATTCCTG  50

seq1  AAAATAATTTTAATACAAATACAAAGTTTTATAAATAGCACTCTGCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTTTAATACAAATACAAAGTTTTATAAATAGCACTCTGCTAAT  100

seq1  ATTATAAAGTCATATACATGTTTGCTAAGAAATATTGCAGAAATTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGTCATATACATGTTTGCTAAGAAATATTGCAGAAATTTTCAT  150

seq1  TTTTGTGCTTCTTTTTAGTTTTTTGTCTTTGATTGGAAATAACCTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGCTTCTTTTTAGTTTTTTGTCTTTGATTGGAAATAACCTTTTCC  200

seq1  ATACAATATATTCTGATTACTGATTCTCCTTCCTCAGCTCTTCCAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATATATTCTGATTACTGATTCTCCTTCCTCAGCTCTTCCAACTTC  250

seq1  TTCTTTTCTCCTCCTATTAGAATCCAGATTCTTTCTATCTATCCTTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCCTCCTATTAGAATCCAGATTCTTTCTATCTATCCTTACAA  300

seq1  AACAAAAGATTAATAATAATAATAATAATAATAATAATAATAATGCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGATTAATAATAATAATAATAATAATAATAATAATAATGCAAAA  350

seq1  GCATTCAAATTGGACTAGGACTCAAAAATACTAAAAGAGGAAAAAGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAAATTGGACTAGGACTCAAAAATACTAAAAGAGGAAAAAGAAAC  400

seq1  AAGTTAAAAAGCCTAAGAAACACATATAAGTGCAGAAACACACAGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAAAAGCCTAAGAAACACATATAAGTGCAGAAACACACAGATTCT  450

seq1  CACAACACAGGAATCCCATTACAACACAAAAGCAAAAGCCATAATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACAGGAATCCCATTACAACACAAAAGCAAAAGCCATAATATATA  500

seq1  TGAATATATGTACAAGTTACTTGTAAAACAAAAATCACAAAAGAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATGTACAAGTTACTTGTAAAACAAAAATCACAAAAGAAAGAAA  550

seq1  GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA  600

seq1  GAAAAGAAAAAAAAAGGCTTTCAACAAAATTAAAAGATAAATAACCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAAAAAAGGCTTTCAACAAAATTAAAAGATAAATAACCTCCA  650

seq1  AACATGTTATTGGGCTTGTTTCATTTGGCCCTTCTACTACTAGGCATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTATTGGGCTTGTTTCATTTGGCCCTTCTACTACTAGGCATGGG  700

seq1  GGCTATTTTAGACAGGGTTTCTCTGTATAGCCCTGGATGTCCTGGAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTTTAGACAGGGTTTCTCTGTATAGCCCTGGATGTCCTGGAACTC  750

seq1  ACCCTGTAGACCAGGCTAGCCTCAAACTCAGAAATCCTCCTGCCTCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTAGACCAGGCTAGCCTCAAACTCAGAAATCCTCCTGCCTCTGCC  800

seq1  TCTCAAGAGCTGGGATTAAAGGCATGTACCACCATGCCTGGCTGGGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAGCTGGGATTAAAGGCATGTACCACCATGCCTGGCTGGGGGCT  850

seq1  ACTTTTGAGAGGGTTTTGTTTCCCCAGTGAGACCCTCATGGAGAACCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAGAGGGTTTTGTTTCCCCAGTGAGACCCTCATGGAGAACCTGT  900

seq1  GTAATTTTTATATGACTGACAAGCATGTGTTTAATTTTAGCCTGGAACAT  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAA-TTTTATATGACTGACAAGCATGTGTTTAATTTTAGCCTGGAACAT  949

seq1  TGAAACATATACACACTTGGGAACTTGAAATAAACATCCCGGAAAGAAAA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAAACATATACACACTTGGGAACTTGAAATAAACATCCCCGAAAGAAAA  999

seq1  AAAGGAAAAGAAAAAGAAAAGGCAAAAACAATTCATGAGCTGTTAGAATT  1050
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAA-GAAAAGAAAAAGAAAAGGCAAAAACAATTCATGAGCTGTTAGAATT  1048

seq1  ATTCACAGATGATGGGTTCA-CGAAAATGTCATACAATGTGA-CACTG-C  1097
      |||||||||||||||||||| ||||||||||||||||||||| | ||| |
seq2  ATTCACAGATGATGGGTTCACCGAAAATGTCATACAATGTGACCCCTGCC  1098

seq1  TTCAAT-GAGTAAGAGAGACAGAAAGAATAATCAAAAAGCAAG-CATATT  1145
      ||| || ||||||||   ||||||||||  ||||||||||||| ||  ||
seq2  TTCCATGGAGTAAGAAGAACAGAAAGAAATATCAAAAAGCAAGCCAATTT  1148

seq1  GCTAAA-AGA-GCAGAATAAAGGGAAAA  1171
      |||||| ||| ||| |||||||| ||| 
seq2  GCTAAAGAGACGCA-AATAAAGGAAAA-  1174

seq1: chr15_22791631_22792837
seq2: B6Ng01-026P10.g_68_1242 (reverse)

seq1  TCCTCCCAGTTACGCTTTGTGTCATTTTTCTGTACGTTCATACAGATAAA  50
      |||||||||||| |||   |||||||||   ||||| ||||||||| |||
seq2  TCCTCCCAGTTA-GCT---TGTCATTTT--CGTACG-TCATACAGA-AAA  42

seq1  TCAGTACAGATTTTGCTGAGTCTGTTTTTATTGATATGTGTATATGGCTT  100
      ||||| ||||  ||||||    ||||||| |||  ||||||| || || |
seq2  TCAGTTCAGA--TTGCTG---TTGTTTTT-TTGTAATGTGTA-AT-GCCT  84

seq1  CAAAACTGAACACAACATACTGAACAATAATGGTCTAGTTTCAGGGAAAG  150
      |||| |   ||| |||||||||||||||||| ||||||||||||||||| 
seq2  CAAACCGACACA-AACATACTGAACAATAAT-GTCTAGTTTCAGGGAAA-  131

seq1  GTCAGATCCCCTTTTTCCAACAGTCAATAATATTTTCCTGTAGTTCTTTG  200
      ||||||||      || ||||||||||||||||||| |||||||||||||
seq2  GTCAGATC-----ATTTCAACAGTCAATAATATTTT-CTGTAGTTCTTTG  175

seq1  TCTCTGTGACCCTGTAAAAGTTTCCTCTTCAATATTAATGATTTCATAAA  250
      |||   ||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTTCTTGACCCTGTAAAAGTTTCCTC-TCAATATTAATGATTTCATAAA  224

seq1  TATTGATAAGGCTATGGTTTTATTTATTTGCAGGCATTTCTAGAGTTGAC  300
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  TATTGATAAGGCTATGGTTTTATT--ATTGCAGGCATTTCTAGAGTTGAC  272

seq1  TGTTTAATAGCAGACTTCATGATATTCTGTCTCTTACAAACATTCTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATAGCAGACTTCATGATATTCTGTCTCTTACAAACATTCTACAC  322

seq1  CATCTAGAGTTGACTGTTTAATAGCAGACTTCATGATATTCTGTCTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGAGTTGACTGTTTAATAGCAGACTTCATGATATTCTGTCTCTTA  372

seq1  CAAACATTCTACACCATCTTTCTTGATCAAGGGCCTCTCTTCCCATTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTCTACACCATCTTTCTTGATCAAGGGCCTCTCTTCCCATTGAT  422

seq1  GTCTGACAAGGTCATCCTCTGCTACATATGAGGCTAGAGTCATGGGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAAGGTCATCCTCTGCTACATATGAGGCTAGAGTCATGGGTCTC  472

seq1  TCATGTGTACTCTTTGGCTAGTGGTTTAGCTCCTGGGAGCTCTGGGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTACTCTTTGGCTAGTGGTTTAGCTCCTGGGAGCTCTGGGACCA  522

seq1  TCTGATTACTTGATATTGTTGTTTTTCCTATGGGGTTGCAAACTCCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTACTTGATATTGTTGTTTTTCCTATGGGGTTGCAAACTCCTTCT  572

seq1  TCTCCTTCAGTCATGTTTTACATATTCTATTTGAGAAAGTAAAATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCAGTCATGTTTTACATATTCTATTTGAGAAAGTAAAATGATTT  622

seq1  CAGCATTCATTTCAGATTTTTTCTGATATCTACATAAACAGTTGAAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCATTTCAGATTTTTTCTGATATCTACATAAACAGTTGAAATAC  672

seq1  GTTATCATTTTACAGTTTTGATTTTGTTTTTCTATTATGGTAATAGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCATTTTACAGTTTTGATTTTGTTTTTCTATTATGGTAATAGAAAC  722

seq1  ATGGCAAAGTTTATATGGATGTGCTGATAGGTATGATGGAAAGTAATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAAGTTTATATGGATGTGCTGATAGGTATGATGGAAAGTAATTAT  772

seq1  CCAGTTCTATGTACTTTGAAAATAGTTCTATCGAATTAGATATGAACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTATGTACTTTGAAAATAGTTCTATCGAATTAGATATGAACATG  822

seq1  AAGAAACAAATCTAAAAGCACTACCAGATTTTGTGACTGAAAACTGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAATCTAAAAGCACTACCAGATTTTGTGACTGAAAACTGAATT  872

seq1  AATGTTTACCAATAGTGAGATAGATAGATAGATAGATAGATAGATAGATA  950
      |||||||||||||||||    |||||||||||||||||||||||||||||
seq2  AATGTTTACCAATAGTG----AGATAGATAGATAGATAGATAGATAGATA  918

seq1  GATAGATAGATAGATAATAGATAACTGAGACAGAAATCCTATAAATATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAATAGATAACTGAGACAGAAATCCTATAAATATAG  968

seq1  CAATAATGTATTCAATTATTGTGCAAGAATGTTAAAAATTTTGATCAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGTATTCAATTATTGTGCAAGAATGTTAAAAATTTTGATCAGAA  1018

seq1  TCTTTCACAAAAGTTGGTATCTAGAAGGAACATAAAATTTAAAACTGGTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACAAAAGTTGGTATCTAGAAGGAACATAAAATTTAAAACTGGTT  1068

seq1  CTTTGATTTCATAAAAGGAAAGAACTTCTTCGTAAAGTCCATTGATGAAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTTCATAAAAGGAAAGAACTTCTTCGTAAAGTCCATTGATGAAC  1118

seq1  ATAAGGACTAACTATGTCATAGGAGGTCACAGTTTTATGAACATTGGGCA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACTAACTATGTCATAGGAGGTCACAGTTTTATGAACATTGGGCA  1168

seq1  AGAATTC  1207
      |||||||
seq2  AGAATTC  1175