BAC Information

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BAC

Clone NameB6Ng01-027E21
Chromosome15 (Build37)
Map Location 72,063,296 - 72,196,102
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
Downstream geneKcnk9, 1810044A24Rik, LOC665621, Peg13, LOC100041120, Chrac1, Eif2c2, Ptk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027E21.bB6Ng01-027E21.g
ACCDH858085DH858086
length960922
definitionDH858085|Mus musculus domesticus DNA, BAC clone: B6Ng01-027E21, 5' end.DH858086|Mus musculus domesticus DNA, BAC clone: B6Ng01-027E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,063,296 - 72,064,261)(72,195,193 - 72,196,102)
sequence
gaattcacttgctttgttcaattattcatttgttcattgcaaatatttat
tctgcactcagtaccacactgataaggatactgaagatccgggtatgaga
gggtccatgcaccagtatattctggctctttggggatgcctgaaggtggt
agtgaaggagggcacttttcataatctaaatttccttcatcctcacgggt
tatctcatccagacatgctgtgtctaaagcatgcccgaagcctgtcaggg
aaggtggtgctacaatattgtctagatggagcatgctgcttggtactatg
tgcagtaagctaaaagcaaagcccagggaccgacaacaatagctttgttg
caacagtggtaaggcagaacatctaggtggaatgaactatagatatgcta
aaggcctaagtgtattgtgtcacctggtagctgcccctggaatgtttgaa
ccatgtaggactccatattagaatcacattctccctaacctcagggacca
cccagggacttcatgctctcactctgaatcccatccatgtcttgtcttta
aggatataagtagccaacaatgtatgtaactagtggagagccacaaaaga
gaaaacaggccttcgatctgcctgatatgaacaggagccacatacagcct
tttccagattctattttttttcgtgtataataattatacaagataatgaa
ttcatcatggcatttttgttcaagtatatcatcatgtactaatgctaccc
tacccccaactagccttcactctcttctcaaagagcccctacttcatgca
tgtatgtgtaaatatctttatataaaacctagattcttcatatgagataa
cacatatcttccggaatctgattatttttcttttgtttttttaattgtat
atttactacaatgttttttccctctctttcttcctacccaaacttttaaa
taccccttcc
gaattcagcattctagaatctgagaccaagctcatgcccagccaaaccca
gccaagtctggctggatgtgcagagctggccagtggatcccagcccaagg
caaaaccatcacagacccaggagcacaaaatcatgccatggtaagtctct
aaatttcatggtgtttcaaatgagtaaagccattctccagagagtggaga
ttgcacatatttttaatctcagcacttgaggaggcagaaacaggccaatg
actttgagttccaggccagccaaggctacagagtaagaccttgtctccaa
aataaaaaaaaaaaccaaaaccagactctgttctgcttttaaacatataa
aaacaagtgttcttctagaagatgggatgattagaaaatcaactgcactc
ttgtgtagctatttgatctcaaggatggttacctctgcttaattagattc
ttctgcttagagagttgatttgcttgcatgaataaatttaaggatgctgc
atttgtcactaaaaattatggtgataaagacatacttttgatacatcttt
atttttattgggtattttaaaaattaagcttatttttgtaatacatgcat
acagaataaactataattataatcacattgggatcatatttatggggtac
tgtgcttgatacaggtattcattttgtgcttttaaatattaaagatgtag
atatcctcgaacatcagttatttctgtatgaaaacatcaaaatctttcca
tctatattttcaaaaataaatgcataaacacacgtgataccatgctgttc
catagcttgtcagacactgcctcctctgtctacaactcaatacctgttca
caaatgctctacctgttgctttcctggcctcagttggctaccaatctact
ctcgactctataaatctgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72063296_72064261
seq2: B6Ng01-027E21.b_45_1004

seq1  GAATTCACTTGCTTTGTTCAATTATTCATTTGTTCATTGCAAATATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCTTTGTTCAATTATTCATTTGTTCATTGCAAATATTTAT  50

seq1  TCTGCACTCAGTACCACACTGATAAGGATACTGAAGATCCGGGTATGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTCAGTACCACACTGATAAGGATACTGAAGATCCGGGTATGAGA  100

seq1  GGGTCCATGCACCAGTATATTCTGGCTCTTTGGGGATGCCTGAAGGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCATGCACCAGTATATTCTGGCTCTTTGGGGATGCCTGAAGGTGGT  150

seq1  AGTGAAGGAGGGCACTTTTCATAATCTAAATTTCCTTCATCCTCACGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGAGGGCACTTTTCATAATCTAAATTTCCTTCATCCTCACGGGT  200

seq1  TATCTCATCCAGACATGCTGTGTCTAAAGCATGCCCGAAGCCTGTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATCCAGACATGCTGTGTCTAAAGCATGCCCGAAGCCTGTCAGGG  250

seq1  AAGGTGGTGCTACAATATTGTCTAGATGGAGCATGCTGCTTGGTACTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGTGCTACAATATTGTCTAGATGGAGCATGCTGCTTGGTACTATG  300

seq1  TGCAGTAAGCTAAAAGCAAAGCCCAGGGACCGACAACAATAGCTTTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAAGCTAAAAGCAAAGCCCAGGGACCGACAACAATAGCTTTGTTG  350

seq1  CAACAGTGGTAAGGCAGAACATCTAGGTGGAATGAACTATAGATATGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGGTAAGGCAGAACATCTAGGTGGAATGAACTATAGATATGCTA  400

seq1  AAGGCCTAAGTGTATTGTGTCACCTGGTAGCTGCCCCTGGAATGTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTAAGTGTATTGTGTCACCTGGTAGCTGCCCCTGGAATGTTTGAA  450

seq1  CCATGTAGGACTCCATATTAGAATCACATTCTCCCTAACCTCAGGGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGGACTCCATATTAGAATCACATTCTCCCTAACCTCAGGGACCA  500

seq1  CCCAGGGACTTCATGCTCTCACTCTGAATCCCATCCATGTCTTGTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGACTTCATGCTCTCACTCTGAATCCCATCCATGTCTTGTCTTTA  550

seq1  AGGATATAAGTAGCCAACAATGTATGTAACTAGTGGAGAGCCACAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATAAGTAGCCAACAATGTATGTAACTAGTGGAGAGCCACAAAAGA  600

seq1  GAAAACAGGCCTTCGATCTGCCTGATATGAACAGGAGCCACATACAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGGCCTTCGATCTGCCTGATATGAACAGGAGCCACATACAGCCT  650

seq1  TTTCCAGATTCTATTTTTTTTCGTGTATAATAATTATACAAGATAATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGATTCTATTTTTTTTCGTGTATAATAATTATACAAGATAATGAA  700

seq1  TTCATCATGGCATTTTTGTTCAAGTATATCATCATGTACTAATGCTACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATGGCATTTTTGTTCAAGTATATCATCATGTACTAATGCTACCC  750

seq1  TACCCCCAACTAGCCTTCACTCTCTTCTCAAAGAGCCCCTACTTCATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCAACTAGCCTTCACTCTCTTCTCAAAGAGCCCCTACTTCATGCA  800

seq1  TGTATGTGTAAATATCTTTATATAAAACCTAGATTCTTCATATGAGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTAAATATCTTTATATAAAACCTAGATTCTTCATATGAGATAA  850

seq1  CACATATCTTCCGGAATCTGAATTATTTTTCTTTTTGTTTTTTTTAAATT  900
      |||||||||||||||||||| |||||||||| ||||||||||||  ||||
seq2  CACATATCTTCCGGAATCTG-ATTATTTTTC-TTTTGTTTTTTT--AATT  896

seq1  GTATTTTAACTACAATGTTTTTCCCCTTCTCTTTCTTCCTACCCAACCTT  950
      |||| || |||||||||||||| ||| ||||||||||||||||||| |||
seq2  GTATATTTACTACAATGTTTTTTCCC-TCTCTTTCTTCCTACCCAAACTT  945

seq1  CTCATATACCCCTTCC  966
       | | |||||||||||
seq2  -TTAAATACCCCTTCC  960

seq1: chr15_72195193_72196102
seq2: B6Ng01-027E21.g_67_974 (reverse)

seq1  GAGTCGAGAGTAGAATGGTAGCCAACTGAGGCCAGGGAAAGCAACAGGTA  50
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  GAGTCGAGAGTAGATTGGTAGCCAACTGAGGCCA-GGAAAGCAACAGGTA  49

seq1  GAGCATTTGGTGAACAGGTACTGAGTTGTAGACAGAGGAGGCAGTGTCTG  100
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  GAGCATTT-GTGAACAGGTATTGAGTTGTAGACAGAGGAGGCAGTGTCTG  98

seq1  ACAAGCTATGGAACAGCATGGTATCACGTGTGTTTATGCATTTATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTATGGAACAGCATGGTATCACGTGTGTTTATGCATTTATTTTTG  148

seq1  AAAATATAGATGGAAAGATTTTGATGTTTTCATACAGAAATAACTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAGATGGAAAGATTTTGATGTTTTCATACAGAAATAACTGATGT  198

seq1  TCGAGGATATCTACATCTTTAATATTTAAAAGCACAAAATGAATACCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGATATCTACATCTTTAATATTTAAAAGCACAAAATGAATACCTGT  248

seq1  ATCAAGCACAGTACCCCATAAATATGATCCCAATGTGATTATAATTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCACAGTACCCCATAAATATGATCCCAATGTGATTATAATTATAG  298

seq1  TTTATTCTGTATGCATGTATTACAAAAATAAGCTTAATTTTTAAAATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGTATGCATGTATTACAAAAATAAGCTTAATTTTTAAAATACC  348

seq1  CAATAAAAATAAAGATGTATCAAAAGTATGTCTTTATCACCATAATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAATAAAGATGTATCAAAAGTATGTCTTTATCACCATAATTTTT  398

seq1  AGTGACAAATGCAGCATCCTTAAATTTATTCATGCAAGCAAATCAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAATGCAGCATCCTTAAATTTATTCATGCAAGCAAATCAACTCT  448

seq1  CTAAGCAGAAGAATCTAATTAAGCAGAGGTAACCATCCTTGAGATCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGAAGAATCTAATTAAGCAGAGGTAACCATCCTTGAGATCAAAT  498

seq1  AGCTACACAAGAGTGCAGTTGATTTTCTAATCATCCCATCTTCTAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACACAAGAGTGCAGTTGATTTTCTAATCATCCCATCTTCTAGAAGA  548

seq1  ACACTTGTTTTTATATGTTTAAAAGCAGAACAGAGTCTGGTTTTGGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTTTTTATATGTTTAAAAGCAGAACAGAGTCTGGTTTTGGTTTT  598

seq1  TTTTTTTATTTTGGAGACAAGGTCTTACTCTGTAGCCTTGGCTGGCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTTTGGAGACAAGGTCTTACTCTGTAGCCTTGGCTGGCCTGG  648

seq1  AACTCAAAGTCATTGGCCTGTTTCTGCCTCCTCAAGTGCTGAGATTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAGTCATTGGCCTGTTTCTGCCTCCTCAAGTGCTGAGATTAAAA  698

seq1  ATATGTGCAATCTCCACTCTCTGGAGAATGGCTTTACTCATTTGAAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGCAATCTCCACTCTCTGGAGAATGGCTTTACTCATTTGAAACAC  748

seq1  CATGAAATTTAGAGACTTACCATGGCATGATTTTGTGCTCCTGGGTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATTTAGAGACTTACCATGGCATGATTTTGTGCTCCTGGGTCTGT  798

seq1  GATGGTTTTGCCTTGGGCTGGGATCCACTGGCCAGCTCTGCACATCCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTGCCTTGGGCTGGGATCCACTGGCCAGCTCTGCACATCCAGC  848

seq1  CAGACTTGGCTGGGTTTGGCTGGGCATGAGCTTGGTCTCAGATTCTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTGGCTGGGTTTGGCTGGGCATGAGCTTGGTCTCAGATTCTAGAA  898

seq1  TGCTGAATTC  910
      ||||||||||
seq2  TGCTGAATTC  908