BAC Information

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BAC

Clone NameB6Ng01-027P12
Chromosome15 (Build37)
Map Location 69,774,625 - 69,878,749
singlet/doubletdoublet
Overlap genenone
Upstream geneKhdrbs3
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027P12.bB6Ng01-027P12.g
ACCDH858572DH858573
length3771,060
definitionDH858572|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P12, 5' end.DH858573|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,878,373 - 69,878,749)(69,774,625 - 69,775,706)
sequence
acaggtattttctgacttcatttggcatctccagagtttcaaacctgcaa
aatatgtagggtgaaatgttgaaggctttaattgaagggacagattttgg
tgataatgtactctcatctgcaaatacaaatttaatcttccaaaacaatg
tttcatattttaacagtcatttgaaaacactagaacacatacatagctag
agaaattcaggaaaacataggagagaagagcagagatgctgatatatttg
agcagctgtccaaaatattctacacccagatgttttatcctgttcttcga
taattagaactcactcatttttgaaagtattatttgtgtggatgttaggt
ttttatggtatttttaatgtgtgtgtg
gaattccagggaattccaggtatcatgtttgagtgctctgcacctgtcta
gatgttagatctcaatgagatggagacacgatctcagagatcagaacaag
gaggcaaaattcaccagccatatgctctttactttctgaatttgtcccac
aaattgaccattaacttatattaacttttggaacaaaaaaggattcaaaa
acaatgatgatagaaatattggcaaatcctgaatttagctttttgttaaa
gtttgacaagataatagccttttacatctaagaaaattttcttttctttt
tttttcttttttttttcttttttctttctttttttttttttttttttcga
gacagggtttctctgtttagccctggctgtcttggaattcactttgtaga
ccaggctggcctcgaactcagaaatcctcctgcctctgcctcccgagtgc
tgagctttaaggtataaaaagtttaaaatattagaaaaaacattgataaa
ttaaatttttaacatggctagctaaattatatattataacaaaagttcat
aagtggtatataatgaatttagtttaaaatcctatacttgtactgttcag
tttgatagacacatgccactgagtgtgtgaccactaaatatctgaatact
tgggaatagtctaaaataaaatgtattatgaatcaaaaacttacttagat
ttgcagtatttgctaagatgagaagcacattattttacttattaacagtc
tcagatgtgttacacatttaaataatgatagttaaatgaattaagtttaa
aatatacatttgtgaaattataattccttttaatttaaaatcattgtacc
agaaaatttaaaatttgtcttaagtactttacagttgcatgtttaagaaa
acaaagcaaacaaaacacaaaaaagaatgcctgacagaaacaaattaagg
aacaggtgtattctgatcacagatcaagttacagtccaccatgggtagta
aagctgagaaagctttccaaatcgcaccattcatgaaagaatctggaata
tcagaattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69878373_69878749
seq2: B6Ng01-027P12.b_54_430 (reverse)

seq1  CACACACACATTAAAAATACCATAAAAACCTAACATCCACACAAATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATTAAAAATACCATAAAAACCTAACATCCACACAAATAATA  50

seq1  CTTTCAAAAATGAGTGAGTTCTAATTATCGAAGAACAGGATAAAACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAAATGAGTGAGTTCTAATTATCGAAGAACAGGATAAAACATCT  100

seq1  GGGTGTAGAATATTTTGGACAGCTGCTCAAATATATCAGCATCTCTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTAGAATATTTTGGACAGCTGCTCAAATATATCAGCATCTCTGCTC  150

seq1  TTCTCTCCTATGTTTTCCTGAATTTCTCTAGCTATGTATGTGTTCTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCTATGTTTTCCTGAATTTCTCTAGCTATGTATGTGTTCTAGTG  200

seq1  TTTTCAAATGACTGTTAAAATATGAAACATTGTTTTGGAAGATTAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATGACTGTTAAAATATGAAACATTGTTTTGGAAGATTAAATTT  250

seq1  GTATTTGCAGATGAGAGTACATTATCACCAAAATCTGTCCCTTCAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCAGATGAGAGTACATTATCACCAAAATCTGTCCCTTCAATTAA  300

seq1  AGCCTTCAACATTTCACCCTACATATTTTGCAGGTTTGAAACTCTGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAACATTTCACCCTACATATTTTGCAGGTTTGAAACTCTGGAGA  350

seq1  TGCCAAATGAAGTCAGAAAATACCTGT  377
      |||||||||||||||||||||||||||
seq2  TGCCAAATGAAGTCAGAAAATACCTGT  377

seq1: chr15_69774625_69775706
seq2: B6Ng01-027P12.g_66_1125

seq1  GAATTCCAGGGAATTCCAGGTATCATGTTTGAGTGCTCTGCACCTGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGAATTCCAGGTATCATGTTTGAGTGCTCTGCACCTGTCTA  50

seq1  GATGTTAGATCTCAATGAGATGGAGACACGATCTCAGAGATCAGAACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGATCTCAATGAGATGGAGACACGATCTCAGAGATCAGAACAAG  100

seq1  GAGGCAAAATTCACCAGCCATATGCTCTTTACTTTCTGAATTTGTCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAATTCACCAGCCATATGCTCTTTACTTTCTGAATTTGTCCCAC  150

seq1  AAATTGACCATTAACTTATATTAACTTTTGGAACAAAAAAGGATTCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACCATTAACTTATATTAACTTTTGGAACAAAAAAGGATTCAAAA  200

seq1  ACAATGATGATAGAAATATTGGCAAATCCTGAATTTAGCTTTTTGTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATGATAGAAATATTGGCAAATCCTGAATTTAGCTTTTTGTTAAA  250

seq1  GTTTGACAAGATAATAGCCTTTTACATCTAAGAAAATTTTCTTTTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACAAGATAATAGCCTTTTACATCTAAGAAAATTTTCTTTTCTTTT  300

seq1  TTTTTCTTTTTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTCGA  350

seq1  GACAGGGTTTCTCTGTTTAGCCCTGGCTGTCTTGGAATTCACTTTGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTTTAGCCCTGGCTGTCTTGGAATTCACTTTGTAGA  400

seq1  CCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGCCTCCCGAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGCCTCCCGAGTGC  450

seq1  TGAGCTTTAAGGTATAAAAAGTTTAAAATATTAGAAAAAACATTGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTAAGGTATAAAAAGTTTAAAATATTAGAAAAAACATTGATAAA  500

seq1  TTAAATTTTTAACATGGCTAGCTAAATTATATATTATAACAAAAGTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTTAACATGGCTAGCTAAATTATATATTATAACAAAAGTTCAT  550

seq1  AAGTGGTATATAATGAATTTAGTTTAAAATCCTATACTTGTACTGTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTATATAATGAATTTAGTTTAAAATCCTATACTTGTACTGTTCAG  600

seq1  TTTGATAGACACATGCCACTGAGTGTGTGACCACTAAATATCTGAATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGACACATGCCACTGAGTGTGTGACCACTAAATATCTGAATACT  650

seq1  TGGGAATAGTCTAAAATAAAATGTATTATGAATCAAAAACTTACTTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATAGTCTAAAATAAAATGTATTATGAATCAAAAACTTACTTAGAT  700

seq1  TTGCAGTATTTGCTAAGATGAGAAGCACATTATTTTACTTATTAACAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTATTTGCTAAGATGAGAAGCACATTATTTTACTTATTAACAGTC  750

seq1  TCAGATGTGTTACACATTTAAATAATGATAGTTAAATGAATTAAGTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTGTTACACATTTAAATAATGATAGTTAAATGAATTAAGTTTAA  800

seq1  AATATACATTTGTGAAATTTATAATTCCTTTTAATTTTAAAAATCATTGT  850
      ||||||||||||||||| |||||||||||||||||||  |||||||||||
seq2  AATATACATTTGTGAAA-TTATAATTCCTTTTAATTT--AAAATCATTGT  847

seq1  ACCAGAAAATTTAAAATTTGTCTTAAGTACTTTTACAGTTGCATGTTTAA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACCAGAAAATTTAAAATTTGTCTTAAGTAC-TTTACAGTTGCATGTTTAA  896

seq1  GAAAACAAAGCAAAACAAAACAACAAAAAAAGAAATGCCTGACAGAAACA  950
      ||||||||||| ||||||||| ||||||||   |||||||||||||||||
seq2  GAAAACAAAGC-AAACAAAAC-ACAAAAAA--GAATGCCTGACAGAAACA  942

seq1  AATTAAGGAAACAGGTGTATTCTGATTCACAGATCAAAGTTACAGTCCAC  1000
      |||||||| |||||||||||||||| ||||||||| ||||||||||||||
seq2  AATTAAGG-AACAGGTGTATTCTGA-TCACAGATC-AAGTTACAGTCCAC  989

seq1  CATGGGTAAGTAGATGCTGAGAAAGCTTTTCACAAAATTCGCACCCATTC  1050
      ||||||| |||| | |||||||||||||| |    || ||||| ||||||
seq2  CATGGGT-AGTA-AAGCTGAGAAAGCTTTCC----AAATCGCA-CCATTC  1032

seq1  ATGATAGAAATCTTGGAAATATCAGGAATTCA  1082
      |||| || |||||  | ||||||| |||||||
seq2  ATGAAAG-AATCT--GGAATATCA-GAATTCA  1060