BAC Information

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BAC

Clone NameB6Ng01-028F09
Chromosome15 (Build37)
Map Location 66,477,305 - 66,633,469
singlet/doubletdoublet
Overlap geneTg, Sla
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1
Downstream geneWisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028F09.bB6Ng01-028F09.g
ACCDH858840DH858841
length1,1421,033
definitionDH858840|Mus musculus domesticus DNA, BAC clone: B6Ng01-028F09, 5' end.DH858841|Mus musculus domesticus DNA, BAC clone: B6Ng01-028F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,632,297 - 66,633,469)(66,477,305 - 66,478,346)
sequence
gaattcctgggccatgagatctattgactggagtctgtgagcacagcttc
tttggggctacctaagatactactcaacttctccagcacccccttctctg
ctcagcaatagtgttggaggaatggaaacttttgccaccaacagcatttg
ctagcaacttccttctctgtggtttttgtctgtcatccccttgataaaag
aatttgagctgtgcctctgtcaccaacactcatgaactgcatcttaacat
aaaaaacagcccccttttaagaagcaggctgcttgagaaatgatgcacca
tgtgctctgaactaggtcactctccactcagggagctctgggtgtgcttc
actctgcatgtgtgtctctcgtactgcaggcttcgagtaccttccacagc
tcaaggagagaaagagatggggaatagcatgaaatccacatctccacctt
cggagaggccgttatccagcagtgagggtaagtctgacttctctagagag
atatttaactcagtcctgtaatagcccactgtgggtggtggctcttgtta
aaactgggcagtgggtacctgtgtgacattgtatcattccctcactttgt
gcttcaaatagttaagaatgaacatttggaagggttagatacttggcggt
gtgaaagtgttgtcatctttagagggaactctgagactggtaggctcctt
tgacagagtacatacaggttttgagccactgtaaagtttaaaatctcaaa
tcctgtgtgcatgtgttcttgaaagagccatgaactgagagcaaggcctc
tgagaggaggcagagggagttcagcgctctcagctcatgacttccggttt
gtctatctgtatacactgtagttttctacatgaaaagcataggcttcaac
tttcctccttcctccctttctctctcctctttctcctccactctccctcc
tccctccctttcttctctctctgaatttaggaatacagtctggggcagaa
gggcctttatgcttgagctagtctaatgaaacaacttcaaaagactggcc
atttgctttacttcaatgctaatggaataagtaaattttcttttccctat
gtggcagggctgcactgtgaaggagtcaggtcttctctgact
gaattcattaccaaaggctcctgtattgaatcaaactggagaggaattct
gttaccgagtaataacttgctatacggaaacagacacagattggtaatct
cagatttccttgtaattaatttactagcagtatgataccctgagctttgg
tttacttgtctataaatgatgacataccaacttggaactttgctttgaga
cttaaattatcaagaagcataatacatgaactcgatatcacctatcactg
agtgtcatctatgtgcaggccatgaaattagcatggttagagttggatag
aggataagatcatgttccataggctaatggagacagtaacattttctagt
gagagcccaaccaaagagacctttctttaaaggaagataattatacttga
atgtggtggagcagggagaatagatatatattcgttgaaacagtgttctc
ttaaatttgactagaacatccagaaaaatttaagactttgaaattcctag
tctttgttctctctaaactagagcccaaggaaagacttctgagtgtactt
agttcattagaaacaaaatcgaacaactcagtagcaggagggaagtgagg
gaacggaagaggggaggagaaagcaaataagcagaaggattgctgtgagc
aatggggtttggattctgcctttttaaatcctacatacagtatgtaattt
ccaagttgtaaatattaacattatatctaatcacatagaacattttaaaa
atgcatgtggttgaatctgatgcatcatggttgttttgttgtttaccaac
atttttttaaaggacataggcagaattttgaagtacatgacaaactagaa
gcttcctacatgtctcctttataaataagcagataagagaaatgatgcta
tccaatagagaaccatggaaatcatgtaatgatagatgagttaaaagcct
gcagaaaggtggagctgctgaaaagttattagagcacacagccttcttga
taaggagacgaaaagcagaaatttcttttctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66632297_66633469
seq2: B6Ng01-028F09.b_43_1184 (reverse)

seq1  AGTCAGAGGGAGACCCCTGAACCTCCTTCTCAGATGCAGCCTCTTGCCCA  50
      ||||||| | |||  |||||  ||||||| ||| ||||||| ||   |||
seq2  AGTCAGA-GAAGA--CCTGA--CTCCTTCACAG-TGCAGCC-CT--GCCA  41

seq1  CATAGTGGAAAAAGAAAAAATTTTACTTTATGTCAATTAGCATTTTAAAA  100
      ||||  || |||||||||   ||||| |||| || |||||||||    ||
seq2  CATA--GGGAAAAGAAAA---TTTAC-TTAT-TCCATTAGCATT---GAA  81

seq1  GTAAAAGCAAATGGGCAAGTCTTTTGAGGTTTGTTTTCATTAGACTTGCT  150
      || ||||||||| ||| |||||||||| |||   |||||||||||| |||
seq2  GT-AAAGCAAAT-GGCCAGTCTTTTGAAGTT--GTTTCATTAGACTAGCT  127

seq1  CAAGCATAAAGGCCCTTCTGCCCCAGACTGTATTCCTAAAATTCAGAGAG  200
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAGCATAAAGGCCCTTCTGCCCCAGACTGTATTCCT-AAATTCAGAGAG  176

seq1  AG-AGGAAGGGAGGGAGGGAGGGAGAGGTGGAGGGAGAAAGGAGGAGAGA  249
      || || |||||||||| ||||||||| ||||| ||||||| |||||||||
seq2  AGAAGAAAGGGAGGGA-GGAGGGAGA-GTGGA-GGAGAAA-GAGGAGAGA  222

seq1  GAAAGGGAGGAAGGGAGGAAAGTTGGAAGCCTATGCTTTTCATGTAGGAA  299
      |||||||||||| ||||||||||| ||||||||||||||||||||| |||
seq2  GAAAGGGAGGAA-GGAGGAAAGTT-GAAGCCTATGCTTTTCATGTA-GAA  269

seq1  AACTACAGTGTATACAGATAGACAAACCGGAAGTCATGAGCTGAGGAGCG  349
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AACTACAGTGTATACAGATAGACAAACCGGAAGTCATGAGCTGA-GAGCG  318

seq1  CTGAACTCCCTCTGCCTCCTCTCAGAGGCCTTGCTCTCAGTTCATGGCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCCTCTGCCTCCTCTCAGAGGCCTTGCTCTCAGTTCATGGCTC  368

seq1  TTTCAAGAACACATGCACACAGGATTTGAGATTTTAAACTTTACAGTGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAACACATGCACACAGGATTTGAGATTTTAAACTTTACAGTGGC  418

seq1  TCAAAACCTGTATGTACTCTGTCAAAGGAGCCTACCAGTCTCAGAGTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCTGTATGTACTCTGTCAAAGGAGCCTACCAGTCTCAGAGTTCC  468

seq1  CTCTAAAGATGACAACACTTTCACACCGCCAAGTATCTAACCCTTCCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGATGACAACACTTTCACACCGCCAAGTATCTAACCCTTCCAAA  518

seq1  TGTTCATTCTTAACTATTTGAAGCACAAAGTGAGGGAATGATACAATGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTCTTAACTATTTGAAGCACAAAGTGAGGGAATGATACAATGTC  568

seq1  ACACAGGTACCCACTGCCCAGTTTTAACAAGAGCCACCACCCACAGTGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTACCCACTGCCCAGTTTTAACAAGAGCCACCACCCACAGTGGG  618

seq1  CTATTACAGGACTGAGTTAAATATCTCTCTAGAGAAGTCAGACTTACCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACAGGACTGAGTTAAATATCTCTCTAGAGAAGTCAGACTTACCCT  668

seq1  CACTGCTGGATAACGGCCTCTCCGAAGGTGGAGATGTGGATTTCATGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGGATAACGGCCTCTCCGAAGGTGGAGATGTGGATTTCATGCTA  718

seq1  TTCCCCATCTCTTTCTCTCCTTGAGCTGTGGAAGGTACTCGAAGCCTGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATCTCTTTCTCTCCTTGAGCTGTGGAAGGTACTCGAAGCCTGCA  768

seq1  GTACGAGAGACACACATGCAGAGTGAAGCACACCCAGAGCTCCCTGAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGAGAGACACACATGCAGAGTGAAGCACACCCAGAGCTCCCTGAGTG  818

seq1  GAGAGTGACCTAGTTCAGAGCACATGGTGCATCATTTCTCAAGCAGCCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGACCTAGTTCAGAGCACATGGTGCATCATTTCTCAAGCAGCCTG  868

seq1  CTTCTTAAAAGGGGGCTGTTTTTTATGTTAAGATGCAGTTCATGAGTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAAAGGGGGCTGTTTTTTATGTTAAGATGCAGTTCATGAGTGTT  918

seq1  GGTGACAGAGGCACAGCTCAAATTCTTTTATCAAGGGGATGACAGACAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGAGGCACAGCTCAAATTCTTTTATCAAGGGGATGACAGACAAA  968

seq1  AACCACAGAGAAGGAAGTTGCTAGCAAATGCTGTTGGTGGCAAAAGTTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGAGAAGGAAGTTGCTAGCAAATGCTGTTGGTGGCAAAAGTTTC  1018

seq1  CATTCCTCCAACACTATTGCTGAGCAGAGAAGGGGGTGCTGGAGAAGTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTCCAACACTATTGCTGAGCAGAGAAGGGGGTGCTGGAGAAGTTG  1068

seq1  AGTAGTATCTTAGGTAGCCCCAAAGAAGCTGTGCTCACAGACTCCAGTCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTATCTTAGGTAGCCCCAAAGAAGCTGTGCTCACAGACTCCAGTCA  1118

seq1  ATAGATCTCATGGCCCAGGAATTC  1173
      ||||||||||||||||||||||||
seq2  ATAGATCTCATGGCCCAGGAATTC  1142

seq1: chr15_66477305_66478346
seq2: B6Ng01-028F09.g_68_1100

seq1  GAATTCATTACCAAAGGCTCCTGTATTGAATCAAACTGGAGAGGAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCAAAGGCTCCTGTATTGAATCAAACTGGAGAGGAATTCT  50

seq1  GTTACCGAGTAATAACTTGCTATACGGAAACAGACACAGATTGGTAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCGAGTAATAACTTGCTATACGGAAACAGACACAGATTGGTAATCT  100

seq1  CAGATTTCCTTGTAATTAATTTACTAGCAGTATGATACCCTGAGCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCCTTGTAATTAATTTACTAGCAGTATGATACCCTGAGCTTTGG  150

seq1  TTTACTTGTCTATAAATGATGACATACCAACTTGGAACTTTGCTTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTGTCTATAAATGATGACATACCAACTTGGAACTTTGCTTTGAGA  200

seq1  CTTAAATTATCAAGAAGCATAATACATGAACTCGATATCACCTATCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTATCAAGAAGCATAATACATGAACTCGATATCACCTATCACTG  250

seq1  AGTGTCATCTATGTGCAGGCCATGAAATTAGCATGGTTAGAGTTGGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATCTATGTGCAGGCCATGAAATTAGCATGGTTAGAGTTGGATAG  300

seq1  AGGATAAGATCATGTTCCATAGGCTAATGGAGACAGTAACATTTTCTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGATCATGTTCCATAGGCTAATGGAGACAGTAACATTTTCTAGT  350

seq1  GAGAGCCCAACCAAAGAGACCTTTCTTTAAAGGAAGATAATTATACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCCAACCAAAGAGACCTTTCTTTAAAGGAAGATAATTATACTTGA  400

seq1  ATGTGGTGGAGCAGGGAGAATAGATATATATTCGTTGAAACAGTGTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTGGAGCAGGGAGAATAGATATATATTCGTTGAAACAGTGTTCTC  450

seq1  TTAAATTTGACTAGAACATCCAGAAAAATTTAAGACTTTGAAATTCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTGACTAGAACATCCAGAAAAATTTAAGACTTTGAAATTCCTAG  500

seq1  TCTTTGTTCTCTCTAAACTAGAGCCCAAGGAAAGACTTCTGAGTGTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTCTCTCTAAACTAGAGCCCAAGGAAAGACTTCTGAGTGTACTT  550

seq1  AGTTCATTAGAAACAAAATCGAACAACTCAGTAGCAGGAGGGAAGTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTAGAAACAAAATCGAACAACTCAGTAGCAGGAGGGAAGTGAGG  600

seq1  GAACGGAAGAGGGGAGGAGAAAGCAAATAAGCAGAAGGATTGCTGTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGAAGAGGGGAGGAGAAAGCAAATAAGCAGAAGGATTGCTGTGAGC  650

seq1  AATGGGGTTTGGATTCTGCCTTTTTAAATCCTACATACAGTATGTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTTTGGATTCTGCCTTTTTAAATCCTACATACAGTATGTAATTT  700

seq1  CCAAGTTGTAAATATTAACATTATATCTAATCACATAGAACATTTT-AAA  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCAAGTTGTAAATATTAACATTATATCTAATCACATAGAACATTTTAAAA  750

seq1  ATGCATGTGGTTGAATCTGATGCATCATGGTTGTTTTGTTGTTTACCAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTGGTTGAATCTGATGCATCATGGTTGTTTTGTTGTTTACCAAC  800

seq1  ATTTTTTTAAAGGACATAGGCAGAATTTTGAAGTAACATGACAAACTAGA  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTTTTTTAAAGGACATAGGCAGAATTTTGAAGT-ACATGACAAACTAGA  849

seq1  AGCTTCCTACATGTCTCC-TTATAAATAAGTCAGAATAAGGAGAAATGGA  898
      |||||||||||||||||| ||||||||||| ||| |||| ||||||| ||
seq2  AGCTTCCTACATGTCTCCTTTATAAATAAG-CAG-ATAA-GAGAAAT-GA  895

seq1  TGCTATCCAATAGAGAACCATGGAAATCCATGTAATGATAGATGAGTTAA  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCTATCCAATAGAGAACCATGGAAAT-CATGTAATGATAGATGAGTTAA  944

seq1  AAGCCTGTAGGAAAAGGTGGAGCATGCTGAAAAGTATTTAGCAGCAGCAC  998
      ||||||| ||  ||||||||||| |||||||||||  |||| |||| |||
seq2  AAGCCTGCAG--AAAGGTGGAGC-TGCTGAAAAGTTATTAG-AGCA-CAC  989

seq1  AG-CTTCCTGATAAGGAGACGGAAAGCAGAAGTTTCATTTTCTTA  1042
      || |||| ||||||||||||| ||||||||| |||| |||||| |
seq2  AGCCTTCTTGATAAGGAGACGAAAAGCAGAAATTTC-TTTTCTAA  1033