BAC Information

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BAC

Clone NameB6Ng01-031D23
Chromosome15 (Build37)
Map Location 5,921,434 - 5,922,569
singlet/doubletsinglet
Overlap genenone
Upstream geneC7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358
Downstream geneLOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031D23.bB6Ng01-031D23.g
ACCDH860919DH860920
length1,1241,195
definitionDH860919|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D23, 5' end.DH860920|Mus musculus domesticus DNA, BAC clone: B6Ng01-031D23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatggcatgtctttttttgtaaataatgattaaagggtatctt
gtgtttaaataaaagtccatagaagcttcactaaattgtcaaacactata
aaatcatataaaatgaagtctgaatgaaaacttttatcctcattgataaa
tagttaaggaaaactagaaagcataatttggatattatagtgccattttg
acagctaagtagtaagtaaatagataaatttcatttgaaatacactttac
aaaatctcatttgctttaaatatacatttcagaagacagttccaagtaac
atgttcatatgcattcttcaacaaaaagctcaagccagtttactatacac
agacatgacttgtcctcagacccacattgtcctatcgatgagcaagtcgt
tgaagcaactgtgccacattttcttaatctgaatagtaaaggaaatgaac
tagatctgaaatttggaaatggagatcttgcggttcattttcagagtccc
attaaagttaaaagaaatatataagccatacatgctctttttaataatct
cagcactcaggagaatgagaaaaaagaacttcaagtattaggccagacta
ggctgtagagtgagatcctgggagagagggagggcagtgagcagaaaaag
gaaaagaaaataaagagatgaaaagaggaaaagaagctaagaaaaaacag
ttcacatgagatagttatagtgccagttcattgaaagccacttccaactt
tgattaaactacttctgtctttctcaatgcatttatattattctagcaaa
atagcacatttaccattaccctaagtgaattataaataatacaaagtatt
gagtatatactggaagaacttaatttaatgttgatcaaagaatagtactc
acaaataaatgctgaaaagttaatacatgcatgatgacagttgcattgtt
gctcacaaatgtgaaatttccacttataaaaagttatttcatcttaattt
gttatattgtcaagaaatggagaataaagactagattatgccttattgct
ctagtcttggcagctatttagcacttcaaattttattttaaacaaataaa
agtaatctttgaattggctaacat
gaattctttgtttagctctgtgccccatttttaaatggggttatttggtt
ttctggagtctatcttcttgagatttctctttctgagaaagaaattaggg
aaacaacacctttcacagtagtcacaaataatataaaataccttggtgtg
actctaactaaggaagtgaaagatctgtatgataagaacttcaactctct
gaagaaagaaatcaaagaagatctcagaagatggaaagatctcccaagct
catggattggcaggattaatatagtaaaaatggctatcttgccaaaagca
atctacagattcaatgcaatccccatcaaaattccaactcaattcttcaa
cgaattagaaagagcaattggcaaattcatttggaataacaaaaaaccta
ggatagcaaaaactcttctcaatgataaaagaacctctggtggaatcacc
atgcctgacctaaagctgttctacagagcaattgtgataaaaactgcatg
gtactggtatagcgacagacaagtagaccaatggaatagaattgaagacc
cagacatgaatctacacacctatggtcacttgatcttcgacaagggagct
aaaaccatccagtggaaaaaagacagcattttcaagaaagtgtcgtggca
caactggcggttatcatgtagaagaatctgaattgattcattcttatctc
cttgtacaaagctcaagcctaagtggatcaaggaacgccacataaaacta
gagacactgaaacttatagaggagaaagtgggggaaagcctcgaagatat
gggccataggggatgataagtttctgaatagaacacaatggctgtgctgt
agatcgagatttacaatggcacctcataaattgcaagcatctattaggca
aagaactgtcatagacaaaaggcacccacagatgggaaaggatcttacca
atctaatcagatagggactaattccatatatgtagttctcctcttaaccc
acctaaatataataactccctgagttcattttactcagtcttctatcaaa
gatgtactttagagcgaagctctcaattagaataatagctgggaaaatat
tctacttctggcacgggttcgattcaataccatgctgataggaatttcaa
gctacgaagtctgtcatccattggacgccacatcttgtgtcagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_5921434_5922569
seq2: B6Ng01-031D23.b_48_1171

seq1  GAATTCTCATGGCATGTCTTTTTTTGTAAATAATGATTAAAGGGTATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGCATGTCTTTTTTTGTAAATAATGATTAAAGGGTATCTT  50

seq1  GTGTTTAAATAAAAGTCCATAGAAGCTTCACTAAATTGTCAAACACTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAAATAAAAGTCCATAGAAGCTTCACTAAATTGTCAAACACTATA  100

seq1  AAATCATATAAAATGAAGTCTGAATGAAAACTTTTATCCTCATTGATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATAAAATGAAGTCTGAATGAAAACTTTTATCCTCATTGATAAA  150

seq1  TAGTTAAGGAAAACTAGAAAGCATAATTTGGATATTATAGTGCCATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGGAAAACTAGAAAGCATAATTTGGATATTATAGTGCCATTTTG  200

seq1  ACAGCTAAGTAGTAAGTAAATAGATAAATTTCATTTGAAATACACTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAAGTAGTAAGTAAATAGATAAATTTCATTTGAAATACACTTTAC  250

seq1  AAAATCTCATTTGCTTTAAATATACATTTCAGAAGACAGTTCCAAGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCATTTGCTTTAAATATACATTTCAGAAGACAGTTCCAAGTAAC  300

seq1  ATGTTCATATGCATTCTTCAACAAAAAGCTCAAGCCAGTTTACTATACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATATGCATTCTTCAACAAAAAGCTCAAGCCAGTTTACTATACAC  350

seq1  AGACATGACTTGTCCTCAGACCCACATTGTCCTATCGATGAGCAAGTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGACTTGTCCTCAGACCCACATTGTCCTATCGATGAGCAAGTCGT  400

seq1  TGAAGCAACTGTGCCACATTTTCTTAATCTGAATAGTAAAGGAAATGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAACTGTGCCACATTTTCTTAATCTGAATAGTAAAGGAAATGAAC  450

seq1  TAGATCTGAAATTTGGAAATGGAGATCTTGCGGTTCATTTTCAGAGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTGAAATTTGGAAATGGAGATCTTGCGGTTCATTTTCAGAGTCCC  500

seq1  ATTAAAGTTAAAAGAAATATATAAGCCATACATGCTCTTTTTAATAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTTAAAAGAAATATATAAGCCATACATGCTCTTTTTAATAATCT  550

seq1  CAGCACTCAGGAGAATGAGAAAAAAGAACTTCAAGTATTAGGCCAGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCAGGAGAATGAGAAAAAAGAACTTCAAGTATTAGGCCAGACTA  600

seq1  GGCTGTAGAGTGAGATCCTGGGAGAGAGGGAGGGCAGTGAGCAGAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAGAGTGAGATCCTGGGAGAGAGGGAGGGCAGTGAGCAGAAAAAG  650

seq1  GAAAAGAAAATAAAGAGATGAAAAGAGGAAAAGAAGCTAAGAAAAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAATAAAGAGATGAAAAGAGGAAAAGAAGCTAAGAAAAAACAG  700

seq1  TTCACATGAGATAGTTATAGTGCCAGTTCATTGAAAGCCACTTCCAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGAGATAGTTATAGTGCCAGTTCATTGAAAGCCACTTCCAACTT  750

seq1  TGATTAAACTACTTCTGTCTTTCTCAATGCATTTATATTATTCTAGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAACTACTTCTGTCTTTCTCAATGCATTTATATTATTCTAGCAAA  800

seq1  ATAGCACATTTACCATTACCCTAAGTGAATTATAAATAATACAAAGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACATTTACCATTACCCTAAGTGAATTATAAATAATACAAAGTATT  850

seq1  GAGTAATATACTGGAAGAACTTAATTTAATGTTGATCAAAGAATAGTACT  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGT-ATATACTGGAAGAACTTAATTTAATGTTGATCAAAGAATAGTACT  899

seq1  CCACAAATAAATGCTGAAAAAGTTAATACATGCATGATGACAGTTGCATT  950
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  -CACAAATAAATGCTG-AAAAGTTAATACATGCATGATGACAGTTGCATT  947

seq1  GTTGCTCACAAATGTGAAAATTTCCACTTATAAAAAGTTATTTCATCTTA  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTGCTCACAAATGTG-AAATTTCCACTTATAAAAAGTTATTTCATCTTA  996

seq1  ATTATGTATATTGTCAAGAAATGGAGAATAAAAGACTAGATTATGCCTTA  1050
      |||   ||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTTGTTATATTGTCAAGAAATGGAGAAT-AAAGACTAGATTATGCCTTA  1045

seq1  TTGCTCTAGTCTTGGCAGCTATTTAGCACTTTCATATTTTATTTTTAATA  1100
      ||||||||||||||||||||||||||||| |||| ||||||||||  | |
seq2  TTGCTCTAGTCTTGGCAGCTATTTAGCAC-TTCAAATTTTATTTT--AAA  1092

seq1  CAAATAAAATGTAATCTTTTTAGATTGTGCTAACAT  1136
      ||||||||| |||||||||   || |  ||||||||
seq2  CAAATAAAA-GTAATCTTT---GAATTGGCTAACAT  1124