BAC Information

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BAC

Clone NameB6Ng01-032C11
Chromosome15 (Build37)
Map Location 20,122,159 - 20,170,583
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302, Cdh12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032C11.bB6Ng01-032C11.g
ACCDH861571DH861572
length1,129911
definitionDH861571|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C11, 5' end.DH861572|Mus musculus domesticus DNA, BAC clone: B6Ng01-032C11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,169,447 - 20,170,583)(20,122,159 - 20,122,701)
sequence
gaattccaatgatcttttcctgctgtatttgctggtatcattttgggaag
tgcgtttaaaacattgcaaacaatgtcaggggatgtcttccaataggatg
aagtggaagaagaaaataggagaatcaattttgggtcatttcacttgttc
ctgcacacgtatctgcttgctttgagaatgcaagcttcatttctctaaaa
gttccaaactgcaatcaaaagtcatttacataaaagacagcaggtaaaaa
cgttttatagcatatttcccttccatacaggaaggaatagagagtagaaa
aagaaaaaaaaatcatcaaagagtttatgaggtcgtttctgaaacaaagt
tgaacattaaaaaaacagcccttggcttctgatggaaaatcatttgaagt
tatacaggttccatggaatgcatttaaggcagtatagcagatggagtttt
gagtaacatcttgagttaatttatttttgaagtacacaatgagtttttat
gatataattgaattaaaaagtctcagaaattcctttctctggttatttgg
ctattaacatgtaaaacaataaaaataaatttataacaatttttataata
agatggatagacacagtatctgagatattatgtgaaagatgtttttaatg
gtttagtttgggaacaatataggagaattcatatctgagcctgtcagtta
ttaaataagacttaggtaatattattatagagtttgagttactaatacta
tttatatgctaaacaataaaacaattataatttataagtgattctttttt
ccaaaatatataagtgatctataaagaccaaaggagttcagaattaactg
caagtataaattttatcaatagaacctcataattttttacagacctatat
aattgatattttaagtctactttcattctgatcattaaaaggagaataat
atgactaaaataagtaaagaaatactcctttacttagatttactataatt
gtaacttttatgattctcacaacatataattgtgcagatttaaagaatag
catttaaatacatctctaggacctggtttcttaattttacttaatagttt
catatttataaatatagactctcagtttc
gaattcaaatatgaactctattgttttcattttcttttattaattacttt
tagatttttaaagtccagctgttgccccctcttggttccctttgccatag
tttcttatcctattcattgggacttctccttgggccaccagtcctcccca
ctccctagggccttaggtctctgtagggttaggtgcatcatctacaattg
agggcagaccaggcagtcctctgctgtatatatgtttcgagccttatacc
aactaacttaactagtgtatgctgcctggttagtggctcagtgtctgaga
gatcttaggggtccttgttagttgagactgctggttttcctatggggtag
cccacctcttcacctgcttccagcctttcgataatcaaccacaggtattc
ccgactacagtccattggttgcatgctaagtatctgcatctgtcttactc
agctgcttgttgggtctctcagaggacagccatgccaggctcctgttttt
aagaagaacacaacatcagtaatagtgtcaggccttggactttggaaccc
cttgagctggatcccaatttgggcctgtaactggcccttctttctctcag
tctcttttccatttttattcctgcagtgctttcaaaacaggaacatctcg
gggtcagatctcttaattgtgggatggcaaatccatccctccacttgatg
ccttatctttctactggaggtagtcattgtaagttccctcacaccactgt
aggacatttctttgtttttctttgtttttaattttttattggatattttg
tttatttacatttcaaatgttatcctcttccaggttgtcccccccccctg
aatcccctatccattcccctctccctgcttctatcatggagtcccctcct
actacccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20169447_20170583
seq2: B6Ng01-032C11.b_46_1174 (reverse)

seq1  GAAACTTGAGAGTTTATATTTTAATAAATATGAAACTATTAAGTAAAATT  50
      ||||| ||||||| |||||||  ||||||||||||||||||||||||| |
seq2  GAAAC-TGAGAGTCTATATTT--ATAAATATGAAACTATTAAGTAAAA-T  46

seq1  TAAGAAACAAGTTCCTAGAGATGTATTTAATTGCTATTCTTTAAATCTGC  100
      |||||||| || |||||||||||||||||| |||||||||||||||||||
seq2  TAAGAAACCAGGTCCTAGAGATGTATTTAAATGCTATTCTTTAAATCTGC  96

seq1  ACAATTATATGTTGTGAGAATCATAAAAGTTTACATTATAGTAAATCTAA  150
      |||||||||||||||||||||||||||||||   |||||||||||||| |
seq2  ACAATTATATGTTGTGAGAATCATAAAAGTTACAATTATAGTAAATCT-A  145

seq1  AGTAAAGGAGTATTTCTTTAACTTATTTTAGTCATATTATTCTACTTTTT  200
      ||||||||||||||||||| ||||||||||||||||||||||| | ||||
seq2  AGTAAAGGAGTATTTCTTT-ACTTATTTTAGTCATATTATTCT-CCTTTT  193

seq1  AATGATCAAGAATGAAAGTAGACTTAAAATATCAATTATATAGGTCTGTA  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATC-AGAATGAAAGTAGACTTAAAATATCAATTATATAGGTCTGTA  242

seq1  AAAAATTATGAGGTTCTATTGATAAAATTTATACTTGCAGTTAATTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATGAGGTTCTATTGATAAAATTTATACTTGCAGTTAATTCTGA  292

seq1  ACTCCTTTGGTCTTTATAGATCACTTATATATTTTGGAAAAAAGAATCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTGGTCTTTATAGATCACTTATATATTTTGGAAAAAAGAATCAC  342

seq1  TTATAAATTATAATTGTTTTATTGTTTAGCATATAAATAGTATTAGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATTATAATTGTTTTATTGTTTAGCATATAAATAGTATTAGTAAC  392

seq1  TCAAACTCTATAATAATATTACCTAAGTCTTATTTAATAACTGACAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCTATAATAATATTACCTAAGTCTTATTTAATAACTGACAGGCT  442

seq1  CAGATATGAATTCTCCTATATTGTTCCCAAACTAAACCATTAAAAACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGAATTCTCCTATATTGTTCCCAAACTAAACCATTAAAAACATC  492

seq1  TTTCACATAATATCTCAGATACTGTGTCTATCCATCTTATTATAAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATAATATCTCAGATACTGTGTCTATCCATCTTATTATAAAAATT  542

seq1  GTTATAAATTTATTTTTATTGTTTTACATGTTAATAGCCAAATAACCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATTTATTTTTATTGTTTTACATGTTAATAGCCAAATAACCAGA  592

seq1  GAAAGGAATTTCTGAGACTTTTTAATTCAATTATATCATAAAAACTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAATTTCTGAGACTTTTTAATTCAATTATATCATAAAAACTCATT  642

seq1  GTGTACTTCAAAAATAAATTAACTCAAGATGTTACTCAAAACTCCATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTTCAAAAATAAATTAACTCAAGATGTTACTCAAAACTCCATCTG  692

seq1  CTATACTGCCTTAAATGCATTCCATGGAACCTGTATAACTTCAAATGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTGCCTTAAATGCATTCCATGGAACCTGTATAACTTCAAATGATT  742

seq1  TTCCATCAGAAGCCAAGGGCTGTTTTTTTAATGTTCAACTTTGTTTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCAGAAGCCAAGGGCTGTTTTTTTAATGTTCAACTTTGTTTCAGA  792

seq1  AACGACCTCATAAACTCTTTGATGATTTTTTTTTCTTTTTCTACTCTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACCTCATAAACTCTTTGATGATTTTTTTTTCTTTTTCTACTCTCTA  842

seq1  TTCCTTCCTGTATGGAAGGGAAATATGCTATAAAACGTTTTTACCTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTGTATGGAAGGGAAATATGCTATAAAACGTTTTTACCTGCTG  892

seq1  TCTTTTATGTAAATGACTTTTGATTGCAGTTTGGAACTTTTAGAGAAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATGTAAATGACTTTTGATTGCAGTTTGGAACTTTTAGAGAAATG  942

seq1  AAGCTTGCATTCTCAAAGCAAGCAGATACGTGTGCAGGAACAAGTGAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGCATTCTCAAAGCAAGCAGATACGTGTGCAGGAACAAGTGAAAT  992

seq1  GACCCAAAATTGATTCTCCTATTTTCTTCTTCCACTTCATCCTATTGGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAAAATTGATTCTCCTATTTTCTTCTTCCACTTCATCCTATTGGAA  1042

seq1  GACATCCCCTGACATTGTTTGCAATGTTTTAAACGCACTTCCCAAAATGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCCCCTGACATTGTTTGCAATGTTTTAAACGCACTTCCCAAAATGA  1092

seq1  TACCAGCAAATACAGCAGGAAAAGATCATTGGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAAATACAGCAGGAAAAGATCATTGGAATTC  1129

seq1: chr15_20122159_20122701
seq2: B6Ng01-032C11.g_69_611

seq1  GAATTCAAATATGAACTCTATTGTTTTCATTTTCTTTTATTAATTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATGAACTCTATTGTTTTCATTTTCTTTTATTAATTACTTT  50

seq1  TAGATTTTTAAAGTCCAGCTGTTGCCCCCTCTTGGTTCCCTTTGCCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTAAAGTCCAGCTGTTGCCCCCTCTTGGTTCCCTTTGCCATAG  100

seq1  TTTCTTATCCTATTCATTGGGACTTCTCCTTGGGCCACCAGTCCTCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATCCTATTCATTGGGACTTCTCCTTGGGCCACCAGTCCTCCCCA  150

seq1  CTCCCTAGGGCCTTAGGTCTCTGTAGGGTTAGGTGCATCATCTACAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGGGCCTTAGGTCTCTGTAGGGTTAGGTGCATCATCTACAATTG  200

seq1  AGGGCAGACCAGGCAGTCCTCTGCTGTATATATGTTTCGAGCCTTATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGACCAGGCAGTCCTCTGCTGTATATATGTTTCGAGCCTTATACC  250

seq1  AACTAACTTAACTAGTGTATGCTGCCTGGTTAGTGGCTCAGTGTCTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTTAACTAGTGTATGCTGCCTGGTTAGTGGCTCAGTGTCTGAGA  300

seq1  GATCTTAGGGGTCCTTGTTAGTTGAGACTGCTGGTTTTCCTATGGGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAGGGGTCCTTGTTAGTTGAGACTGCTGGTTTTCCTATGGGGTAG  350

seq1  CCCACCTCTTCACCTGCTTCCAGCCTTTCGATAATCAACCACAGGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCTTCACCTGCTTCCAGCCTTTCGATAATCAACCACAGGTATTC  400

seq1  CCGACTACAGTCCATTGGTTGCATGCTAAGTATCTGCATCTGTCTTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTACAGTCCATTGGTTGCATGCTAAGTATCTGCATCTGTCTTACTC  450

seq1  AGCTGCTTGTTGGGTCTCTCAGAGGACAGCCATGCCAGGCTCCTGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTGTTGGGTCTCTCAGAGGACAGCCATGCCAGGCTCCTGTTTTT  500

seq1  AAGAAGAACACAACATCAGTAATAGTGTCAGGCCTTGGACTTT  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACACAACATCAGTAATAGTGTCAGGCCTTGGACTTT  543