BAC Information

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BAC

Clone NameB6Ng01-032G23
Chromosome15 (Build37)
Map Location 49,701,937 - 49,703,101
singlet/doubletsinglet
Overlap geneLOC665160
Upstream geneEG665146, LOC100039600, LOC100039539
Downstream geneTrps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G23.bB6Ng01-032G23.g
ACCDH861773DH861774
length1,141150
definitionDH861773|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G23, 5' end.DH861774|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccacaagagaaggattccttcacatataagtttagttttctcgc
attgatcatagaatcaagattatagataatcaagataatccatcaggcct
agtgtagataatcttgcactatgcccaaaagcttgcctcctaagtgactc
tatattccaccaagttgagataactatcaaaaaggacattcccatttaga
taactctctcttaaaataccctcacagaagtttactttattaatgtccca
ttgtttttatatacaaggaagttgactagatacactactcactacactga
gctatttgtaattatttaagcatacaaactgctttcctagctgagtgcta
ctccatgtagatgaggtaaacccatactacattaccagtataagacagac
gaaatcccagaccctgttctgacatattatagataaagtaataagcatat
aagcaaaacttgctcatagaaattgttttatttataatgcaatatgattg
gaacattaaatcttcacagtgttccaaatgtaagcacctttacatattat
atacatggtaaaatatttttgaactaggatcagatcactaaatcagacag
aaacaaatgaacaaaaatgacacaagccagtccctgagcatgaaaatttg
tgtgagcaaagtcaagccttctatttctgatttgaggcttacttgaatct
tatcactctactcatataatgcaatgtttatagacatcactttaaagaag
ccacatggctgagagctacagaattcaaaaaggaggatccctttctaaga
tccactgctctaatgaccagatatactgttaagtcaagacagactgtaga
agtgtctgcagtaacgcatctgcagtaggaatttctgagtgcattattgc
ttgaccatacatgagactaaatgcctaatgagctgaaatgaatgcctcta
gggtacaaactcattctcattcaatttcttggctaattttacatatgtta
aagtgtatacacacaatgtaaaggtaatataagctttgatgacttaatag
cagatatgctcatgttctttaaataccttaatttctatttctcacaggca
ataattctacatgttttgggggataagtcattactattggc
cctggatacaatcaacagaactcaagaaggctaacaaggtgaggggccca
agtgaagatgcctcaatcctacttgggagggagaagaaagcaatcacagg
agggtggtaaggagaaggtgcttgggtgggaaaggggacagggaagggaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49701937_49703101
seq2: B6Ng01-032G23.b_45_1185

seq1  GAATTCCCACAAGAGAAGGATTCCTTCACATATAAGTTTAGTTTTCTCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAAGAGAAGGATTCCTTCACATATAAGTTTAGTTTTCTCGC  50

seq1  ATTGATCATAGAATCAAGATTATAGATAATCAAGATAATCCATCAGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCATAGAATCAAGATTATAGATAATCAAGATAATCCATCAGGCCT  100

seq1  AGTGTAGATAATCTTGCACTATGCCCAAAAGCTTGCCTCCTAAGTGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGATAATCTTGCACTATGCCCAAAAGCTTGCCTCCTAAGTGACTC  150

seq1  TATATTCCACCAAGTTGAGATAACTATCAAAAAGGACATTCCCATTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCACCAAGTTGAGATAACTATCAAAAAGGACATTCCCATTTAGA  200

seq1  TAACTCTCTCTTAAAATACCCTCACAGAAGTTTACTTTATTAATGTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCTCTTAAAATACCCTCACAGAAGTTTACTTTATTAATGTCCCA  250

seq1  TTGTTTTTATATACAAGGAAGTTGACTAGATACACTACTCACTACACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTATATACAAGGAAGTTGACTAGATACACTACTCACTACACTGA  300

seq1  GCTATTTGTAATTATTTAAGCATACAAACTGCTTTCCTAGCTGAGTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGTAATTATTTAAGCATACAAACTGCTTTCCTAGCTGAGTGCTA  350

seq1  CTCCATGTAGATGAGGTAAACCCATACTACATTACCAGTATAAGACAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTAGATGAGGTAAACCCATACTACATTACCAGTATAAGACAGAC  400

seq1  GAAATCCCAGACCCTGTTCTGACATATTATAGATAAAGTAATAAGCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCCAGACCCTGTTCTGACATATTATAGATAAAGTAATAAGCATAT  450

seq1  AAGCAAAACTTGCTCATAGAAATTGTTTTATTTATAATGCAATATGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACTTGCTCATAGAAATTGTTTTATTTATAATGCAATATGATTG  500

seq1  GAACATTAAATCTTCACAGTGTTCCAAATGTAAGCACCTTTACATATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTAAATCTTCACAGTGTTCCAAATGTAAGCACCTTTACATATTAT  550

seq1  ATACATGGTAAAATATTTTTGAACTAGGATCAGATCACTAAATCAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGTAAAATATTTTTGAACTAGGATCAGATCACTAAATCAGACAG  600

seq1  AAACAAATGAACAAAAATGACACAAGCCAGTCCCTGAGCATGAAAATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGAACAAAAATGACACAAGCCAGTCCCTGAGCATGAAAATTTG  650

seq1  TGTGAGCAAAGTCAAGCCTTCTATTTCTGATTTGAGGCTTACTTGAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCAAAGTCAAGCCTTCTATTTCTGATTTGAGGCTTACTTGAATCT  700

seq1  TATCACTCTACTCATATAATGCAATGTTTATAGACATCACTTTAAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCTACTCATATAATGCAATGTTTATAGACATCACTTTAAAGAAG  750

seq1  CCACATGGCTGAGAGCTACAGAATTCAAAAAGGAGGATCCCTTTCTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGCTGAGAGCTACAGAATTCAAAAAGGAGGATCCCTTTCTAAGA  800

seq1  TCCACTGCTCTAATGACCAGATATACTGTTAAGTCAAGACAGACTGTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCTCTAATGACCAGATATACTGTTAAGTCAAGACAGACTGTAGA  850

seq1  AGTGTCTGCAGTAACGCATCTGCAGTAGGAATTTCTGAGTGCATTATTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGCAGTAACGCATCTGCAGTAGGAATTTCTGAGTGCATTATTGC  900

seq1  TTGACCATACATGAGACTAAATGCCTAATGAGCTGAAATGAATGCCTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCATACATGAGACTAAATGCCTAATGAGCTGAAATGAATGCCTCTA  950

seq1  GGGTACAAACTCATTCTCATTCAATTTCTTGGCTAATTTTACAATATGTT  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGTACAAACTCATTCTCATTCAATTTCTTGGCTAATTTTAC-ATATGTT  999

seq1  AAAGTGTAATAACACAACAATGTAAAAGGTAATATAAGCTTTTTGATGAC  1050
      ||||||||   |||| ||||||| |||||||||||||||  |||||||||
seq2  AAAGTGTA--TACAC-ACAATGT-AAAGGTAATATAAGC--TTTGATGAC  1043

seq1  TTAATTAAGCCAGATATGCTCCATGTTCTTTTAAATACATTAATTTCCTT  1100
      |||||  || |||||||||| ||||||| ||||||||| ||||||||  |
seq2  TTAAT--AG-CAGATATGCT-CATGTTC-TTTAAATACCTTAATTTC--T  1086

seq1  ATTTCTCAACCAGCCATATAATTTCTACATTGTTTGTGGGGGATAAAGTC  1150
      ||||||||  ||| || |||| ||||||| ||||| |||||||| |||||
seq2  ATTTCTCA--CAGGCA-ATAA-TTCTACA-TGTTT-TGGGGGAT-AAGTC  1129

seq1  ATTTACTAAATTGGC  1165
      | |||||  ||||||
seq2  A-TTACT--ATTGGC  1141