BAC Information

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BAC

Clone NameB6Ng01-032I05
Chromosome15 (Build37)
Map Location 77,548,374 - 77,678,753
singlet/doubletdoublet
Overlap geneLOC666348, 2310016F22Rik, Apol2, Myh9
Upstream geneLrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666679
Downstream geneTxn2, Foxred2, Eif3s7, Cacng2, Rabl4, Pvalb, Ncf4, Csf2rb2, Csf2rb1, 1700061J05Rik, Tst, Mpst, Kctd17, Tmprss6, Il2rb, C1qtnf6, Sstr3, EG626952, Rac2, Pscd4, Lrrc62, Mfng, Card10, LOC641104, LOC100041601, Cdc42ep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I05.bB6Ng01-032I05.g
ACCDH861830DH861831
length599777
definitionDH861830|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I05, 5' end.DH861831|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,678,155 - 77,678,753)(77,548,374 - 77,549,151)
sequence
ttgcgcacgcgcgcgcacacacacactcatatatgcgtgcatctcatcag
gaggcaggcaagctggaggggtggagagtgctgtgagtaggtattccagg
gtgctatgggggagaagagggagcaccatgccaggtgggagaatgcagag
aggtctctggagggagcccaacactcacaggctccagggtgggaagggca
ggaacatggcggccaagctgggctctaggcagtgttgtcaaacagtcaca
ggagccattcattgctctagagatatgggatcacaggcttgttgacagaa
tgctagtgagagaatgcaagggaactccctttggggggaggggaggcagg
cgtggtccttgtggctggtgctcagtgattgctgaatgaatagcaaattg
tgtgaaagaatgctagactctttaattaccccctgtagaaagaaatagga
gacctttcaaggtttgtttcaggtacgttcctattgtgtactccaggctg
gccttacatttgtgatcctcttgcctccaccttaggagtgctgacatcac
agtaagaactaccatgcctgtcttagagctaggagcatgcacacttgtg
gaattccttcaagaaactgaaaaacatcaagaataatattcatgccatca
aactgaccaaagccaaccctagcctagtaactaatgctaagcgcctcatg
accacaggaaagacaacaacagaaaccactaaacaagtgaaggaagcctt
tggaggtactgctctggcaatgaccaaaggagcccggatcatgggtgcag
ccaccacaggtttcttcctcctgctggatatagttagctttgtaggagac
tcaaagcatttgcatgaaggagcaaaggctgagtctgctgcagagctgcg
gcatcaggctcaggacccagaacagaagttacaggagctcattcgggtcc
atgacagcctgattcagtgaccatttccccttcagtgtagtgcagaggac
tgggggagggaatgtgctggacagagccatgcacacatgggagtccctga
ctgtatcccttctaggctctatacagccttgcagttcagccaagtggaca
atcgcggtgaccgttcacgcctcccttctgcctgctgccctacttttgcc
tatgactcattcagagctatgcaaggaaaaaatgtagactttttttaaga
actctggaaactttgtgggtggattcatagagttaaccttctccatcact
ggctatagtgtagggatggccttgtttcattgccatccagaagatggtga
agggaagaattgtaatatccaaaattatttcagaccacccagtaccttcc
ctctttcgaaaggattttccaaactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_77678155_77678753
seq2: B6Ng01-032I05.b_42_640 (reverse)

seq1  CACAAGTGTGCATGCTCCTAGCTCTAAGACAGGCATGGTAGTTCTTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGTGCATGCTCCTAGCTCTAAGACAGGCATGGTAGTTCTTACTG  50

seq1  TGATGTCAGCACTCCTAAGGTGGAGGCAAGAGGATCACAAATGTAAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCAGCACTCCTAAGGTGGAGGCAAGAGGATCACAAATGTAAGGCC  100

seq1  AGCCTGGAGTACACAATAGGAACGTACCTGAAACAAACCTTGAAAGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAGTACACAATAGGAACGTACCTGAAACAAACCTTGAAAGGTCT  150

seq1  CCTATTTCTTTCTACAGGGGGTAATTAAAGAGTCTAGCATTCTTTCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCTTTCTACAGGGGGTAATTAAAGAGTCTAGCATTCTTTCACAC  200

seq1  AATTTGCTATTCATTCAGCAATCACTGAGCACCAGCCACAAGGACCACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTATTCATTCAGCAATCACTGAGCACCAGCCACAAGGACCACGC  250

seq1  CTGCCTCCCCTCCCCCCAAAGGGAGTTCCCTTGCATTCTCTCACTAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCCTCCCCCCAAAGGGAGTTCCCTTGCATTCTCTCACTAGCAT  300

seq1  TCTGTCAACAAGCCTGTGATCCCATATCTCTAGAGCAATGAATGGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAACAAGCCTGTGATCCCATATCTCTAGAGCAATGAATGGCTCCT  350

seq1  GTGACTGTTTGACAACACTGCCTAGAGCCCAGCTTGGCCGCCATGTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTTTGACAACACTGCCTAGAGCCCAGCTTGGCCGCCATGTTCCT  400

seq1  GCCCTTCCCACCCTGGAGCCTGTGAGTGTTGGGCTCCCTCCAGAGACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCCACCCTGGAGCCTGTGAGTGTTGGGCTCCCTCCAGAGACCTC  450

seq1  TCTGCATTCTCCCACCTGGCATGGTGCTCCCTCTTCTCCCCCATAGCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCTCCCACCTGGCATGGTGCTCCCTCTTCTCCCCCATAGCACC  500

seq1  CTGGAATACCTACTCACAGCACTCTCCACCCCTCCAGCTTGCCTGCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATACCTACTCACAGCACTCTCCACCCCTCCAGCTTGCCTGCCTCC  550

seq1  TGATGAGATGCACGCATATATGTGTGTGTGTGTGCGCGCGCGTGCGCAA  599
      |||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGATGAGATGCACGCATATATGAGTGTGTGTGTGCGCGCGCGTGCGCAA  599

seq1: chr15_77548374_77549151
seq2: B6Ng01-032I05.g_69_845

seq1  GAATTCCTTCAAGAAACTGAAAAACATCAAGAATAATATTCATGCCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAAGAAACTGAAAAACATCAAGAATAATATTCATGCCATCA  50

seq1  AACTGACCAAAGCCAACCCTAGCCTAGTAACTAATGCTAAGCGCCTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACCAAAGCCAACCCTAGCCTAGTAACTAATGCTAAGCGCCTCATG  100

seq1  ACCACAGGAAAGACAACAACAGAAACCACTAAACAAGTGAAGGAAGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGAAAGACAACAACAGAAACCACTAAACAAGTGAAGGAAGCCTT  150

seq1  TGGAGGTACTGCTCTGGCAATGACCAAAGGAGCCCGGATCATGGGTGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTACTGCTCTGGCAATGACCAAAGGAGCCCGGATCATGGGTGCAG  200

seq1  CCACCACAGGTTTCTTCCTCCTGCTGGATATAGTTAGCTTTGTAGGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACAGGTTTCTTCCTCCTGCTGGATATAGTTAGCTTTGTAGGAGAC  250

seq1  TCAAAGCATTTGCATGAAGGAGCAAAGGCTGAGTCTGCTGCAGAGCTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCATTTGCATGAAGGAGCAAAGGCTGAGTCTGCTGCAGAGCTGCG  300

seq1  GCATCAGGCTCAGGACCCAGAACAGAAGTTACAGGAGCTCATTCGGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGGCTCAGGACCCAGAACAGAAGTTACAGGAGCTCATTCGGGTCC  350

seq1  ATGACAGCCTGATTCAGTGACCATTTCCCCTTCAGTGTAGTGCAGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCCTGATTCAGTGACCATTTCCCCTTCAGTGTAGTGCAGAGGAC  400

seq1  TGGGGGAGGGAATGTGCTGGACAGAGCCATGCACACATGGGAGTCCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGGAATGTGCTGGACAGAGCCATGCACACATGGGAGTCCCTGA  450

seq1  CTGTATCCCTTCTAGGCTCTATACAGCCTTGCAGTTCAGCCAAGTGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCCCTTCTAGGCTCTATACAGCCTTGCAGTTCAGCCAAGTGGACA  500

seq1  ATCGCGGTGACCGTTCACGCCTCCCTTCTGCCTGCTGCCCTACTTTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCGGTGACCGTTCACGCCTCCCTTCTGCCTGCTGCCCTACTTTTGCC  550

seq1  TATGACTCATTCAGAGCTATGCAAGGAAAAAATGTAGACTTTTTTTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTCATTCAGAGCTATGCAAGGAAAAAATGTAGACTTTTTTTAAGA  600

seq1  ACTCTGGAAACTTTGTGGGTGGATTCATAGAGTTAACCTTCTCCATCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGAAACTTTGTGGGTGGATTCATAGAGTTAACCTTCTCCATCACT  650

seq1  GGCTATAGTGTAGGGATGGCCTTGTTCCATTGCCATCCAGAAGATGGTGA  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCTATAGTGTAGGGATGGCCTTGTTTCATTGCCATCCAGAAGATGGTGA  700

seq1  AGGGAAGAATTGTAATATCCAAAATTAATTCAAGACCACCCAGTACCTTC  750
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  AGGGAAGAATTGTAATATCCAAAATTATTTC-AGACCACCCAGTACCTTC  749

seq1  CCCCTTCGAAAAGGACTTTCCAAACTAT  778
      || |||   |||||| ||||||||||||
seq2  CCTCTTTCGAAAGGATTTTCCAAACTAT  777