BAC Information

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BAC

Clone NameB6Ng01-032K14
Chromosome15 (Build37)
Map Location 92,849,478 - 92,850,531
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042529, Cntn1, Pdzrn4, LOC100042552
Downstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032K14.bB6Ng01-032K14.g
ACCDH861924DH861925
length1,107162
definitionDH861924|Mus musculus domesticus DNA, BAC clone: B6Ng01-032K14, 5' end.DH861925|Mus musculus domesticus DNA, BAC clone: B6Ng01-032K14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattctcacatcttggattgtcttttttactttcaccagcgtta
tatttgtgttttcttgggcatcctcagacattcgtctccataaactcttt
ctccttgaactcagcaacctgtttctttgtttctcctttaaacttactga
agtctttggagaggtttgtgattgttcttttaagtcatggatcctggagg
ttatgcatctaatactcattggcaagcgtttctgcaggactgatcagttt
ggtctttcatattgttggtattcttgcgatgatatctgggctacctggac
ttctttgttagttctgagtttgttatggacaaccaggttgaggaagatga
ggagaagtgtgggcaagtagagtctcgagttgaaaatgtcttgggtggga
tatagccaagtgggcggaggggacaggactggcatataggatgtacatgc
tttttgttcaaagcaaagagtgtaggttggagaggaaaactatggagtat
gacatggtagagtcctttggttagcagcataggttggaaggaatctggct
caagcctagagatctctatagtgaaggctattccagggcttttgtggacc
catttgtggtttaaataagacaagaggcttctatatagcttaaagccatt
gacctttagtctggggcagcctctcagctagctatctaaattatccttgg
ctttccaccatcccatctccccatgtggttctcactacttgcttacagct
ctgttctgtccctgctgttctctgcccagtctccatcaatactcttacct
ctgcttgcctgtgtccatggctgcccccaaattccgccccccttacttcc
tgcctcagttattggctggcagatttttgttataaccaatcagcagtaga
taatgcctggatgatctcattggttgtctaaggcatggagggcacctgaa
cttcatcttttgggcagtgtgcaagatcaagcatttacaatggaaaacta
acaacaacaacaacaacatcaacaacaacaaccttgggatgagcctagac
tgacaatacaaacctgcagcacttagctgttatctgctggtcagattaca
attgaaa
catgattttgaaaggggtgctttttgtttctttctttttttttttttgtc
ttattaataatatgcttatttattctgatttttgtttttgtgattttatt
tttatttttgaaagagaggaggagaggggacataaagttgagatggtagg
gaattggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92849478_92850531
seq2: B6Ng01-032K14.b_126_1153 (reverse)

seq1  TTTCAATTGTTAATTCTGTACCAGCAGAATTAACAGCTAAGTGCTCGCAG  50
      ||||||||||  | |||| |||||||||  ||||||||||||||| ||||
seq2  TTTCAATTGT--AATCTG-ACCAGCAGA--TAACAGCTAAGTGCT-GCAG  44

seq1  GATTTTGGTATTGTCATGTCTATGGCTCATCACCAGGTTTGTTTGTTTGT  100
      |   || ||||||||| ||||| |||||||| | |||     |||||   
seq2  G---TTTGTATTGTCA-GTCTA-GGCTCATCCCAAGG-----TTGTT--G  82

seq1  TTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCCATTTGTAAATGC  150
      |||||  | |  ||| |||||   ||||| | ||||||| ||||||||||
seq2  TTGTTGATGTTGTTG-TTGTT--GTTGTTAG-TTTTCCA-TTGTAAATGC  127

seq1  TTGATCTTGCACACTTGCCCAAAAGATGAAGTTCAGGTGGCCCTCCATGC  200
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  TTGATCTTGCACAC-TGCCCAAAAGATGAAGTTCAGGT-GCCCTCCATGC  175

seq1  CTTAGACAACCAATGAGATCATCCAGGCATTATCTTACTGCTGATTGGTT  250
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTAGACAACCAATGAGATCATCCAGGCATTATC-TACTGCTGATTGGTT  224

seq1  ATAACAAAAATCTGCCAGCCAATAACTGAGGCAGGAAGTAAGGGGGGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAAATCTGCCAGCCAATAACTGAGGCAGGAAGTAAGGGGGGCGG  274

seq1  AATTTGGGGGCAGCCATGGACACAGGCAAGCAGAGGTAAGAGTATTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGGGCAGCCATGGACACAGGCAAGCAGAGGTAAGAGTATTGATG  324

seq1  GAGACTGGGCAGAGAACAGCAGGGACAGAACAGAGCTGTAAGCAAGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGGCAGAGAACAGCAGGGACAGAACAGAGCTGTAAGCAAGTAGT  374

seq1  GAGAACCACATGGGGAGATGGGATGGTGGAAAGCCAAGGATAATTTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCACATGGGGAGATGGGATGGTGGAAAGCCAAGGATAATTTAGAT  424

seq1  AGCTAGCTGAGAGGCTGCCCCAGACTAAAGGTCAATGGCTTTAAGCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCTGAGAGGCTGCCCCAGACTAAAGGTCAATGGCTTTAAGCTATA  474

seq1  TAGAAGCCTCTTGTCTTATTTAAACCACAAATGGGTCCACAAAAGCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCCTCTTGTCTTATTTAAACCACAAATGGGTCCACAAAAGCCCTG  524

seq1  GAATAGCCTTCACTATAGAGATCTCTAGGCTTGAGCCAGATTCCTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCCTTCACTATAGAGATCTCTAGGCTTGAGCCAGATTCCTTCCAA  574

seq1  CCTATGCTGCTAACCAAAGGACTCTACCATGTCATACTCCATAGTTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCTGCTAACCAAAGGACTCTACCATGTCATACTCCATAGTTTTCC  624

seq1  TCTCCAACCTACACTCTTTGCTTTGAACAAAAAGCATGTACATCCTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAACCTACACTCTTTGCTTTGAACAAAAAGCATGTACATCCTATAT  674

seq1  GCCAGTCCTGTCCCCTCCGCCCACTTGGCTATATCCCACCCAAGACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCTGTCCCCTCCGCCCACTTGGCTATATCCCACCCAAGACATTT  724

seq1  TCAACTCGAGACTCTACTTGCCCACACTTCTCCTCATCTTCCTCAACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCGAGACTCTACTTGCCCACACTTCTCCTCATCTTCCTCAACCTG  774

seq1  GTTGTCCATAACAAACTCAGAACTAACAAAGAAGTCCAGGTAGCCCAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCATAACAAACTCAGAACTAACAAAGAAGTCCAGGTAGCCCAGAT  824

seq1  ATCATCGCAAGAATACCAACAATATGAAAGACCAAACTGATCAGTCCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCGCAAGAATACCAACAATATGAAAGACCAAACTGATCAGTCCTGC  874

seq1  AGAAACGCTTGCCAATGAGTATTAGATGCATAACCTCCAGGATCCATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACGCTTGCCAATGAGTATTAGATGCATAACCTCCAGGATCCATGAC  924

seq1  TTAAAAGAACAATCACAAACCTCTCCAAAGACTTCAGTAAGTTTAAAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAACAATCACAAACCTCTCCAAAGACTTCAGTAAGTTTAAAGGA  974

seq1  GAAACAAAGAAACAGGTTGCTGAGTTCAAGGAGAAAGAGTTTATGGAGAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAGAAACAGGTTGCTGAGTTCAAGGAGAAAGAGTTTATGGAGAC  1024

seq1  GAAT  1054
      ||||
seq2  GAAT  1028